FFCP PHASE1:Mm9::chr3:37319195..37319257,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:37319195..37319257,+
|short_description=p1@Spata5
|description=CAGE_peak_1_at_Spata5_5end
|association_with_transcript=0bp_to_ENSMUST00000029277,NM_0011635...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=57815 | |EntrezGene=57815 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=327 | |||
|TSSclassifier=NA | |||
|UniProt=Q3UMC0 | |UniProt=Q3UMC0 | ||
|association_with_transcript=0bp_to_ENSMUST00000029277,NM_001163511,NM_021343,uc008pau.2,uc008pav.2,uc012coy.1_5end | |||
|cluster_id=chr3:37319195..37319257,+ | |||
|description=CAGE_peak_1_at_Spata5_5end | |||
|id=chr3:37319195..37319257,+ | |||
|ontology_enrichment_celltype=CL:0000988!8.06e-08!32;CL:0002032!8.06e-08!32;CL:0000037!8.06e-08!32;CL:0000566!8.06e-08!32;CL:0000837!8.06e-08!32;CL:0000791!4.66e-07!9;CL:0000789!4.66e-07!9;CL:0002420!4.66e-07!9;CL:0002419!4.66e-07!9;CL:0000790!4.66e-07!9;CL:0000838!6.11e-07!12;CL:0000542!7.14e-07!13;CL:0000051!7.14e-07!13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,8.06e-08,32;CL:0002032,8.06e-08,32;CL:0000037,8.06e-08,32;CL:0000837,8.06e-08,32;CL:0000791,4.66e-07,9;CL:0000789,4.66e-07,9;CL:0002420,4.66e-07,9;CL:0002419,4.66e-07,9;CL:0000790,4.66e-07,9;CL:0000838,6.11e-07,12;CL:0000542,7.14e-07,13;CL:0000051,7.14e-07,13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000991!7.26e-07!18;UBERON:0005564!7.26e-07!18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000991,7.26e-07,18;UBERON:0005564,7.26e-07,18 | |||
|phase1_expression=16.4953312517938,4.18770489167233,1.36499771816861,4.83942738090928,4.50806156951712,13.5982210248631,15.8856595604957,32.5390775072772,149.236045480767,157.993555267346,112.490205124157,121.014365195925,40.4033722637646,39.7762831006438,25.649451659806,22.6772299476605,16.7894850750755,35.6472246854809,39.6260713120585,26.7365480632759,34.18740264073,17.9716621673602,17.7615856614476,12.6394014006791,10.3234176480227,3.44539178469012,4.30761996159075,6.24866574789078,5.70070258369122,7.05684363327806,9.09095093686749,33.6566256933605,41.2093407681662,15.8481681015439,25.9966457776147,19.9481574430191,30.8295727956177,5.85944283031671,7.0320181007142,7.85285615960697,5.88231488031014,5.46436387966757,8.73918635456076,14.9817213390937,15.7134243390248,17.8040349596831,3.9119567217402,4.14247797122848,2.41654801007919,5.8328969722285,4.05960622713551,4.31257693094915,38.7577819993371,31.9159342484992,32.9371923159615,10.2903774414379,23.7822755149168,8.76642556871652,10.1158230429799,16.9277113367051,13.9442908771359,5.08266798103698,4.4464739805557,4.49949858640699,3.9554654502679,2.1314403448383,1.49800055259202,4.61061966385865,15.0349937847293,10.6654691282036,14.9330722559481,6.56997264128748,9.27647871996777,17.1487118900936,9.39285615978716,12.8690630125403,15.4162233399144,12.896421146604,15.3606533256243,10.8146755938759,9.14876436024097,13.022834263919,9.77140496504833,14.069065250792,13.7518422999129,16.2045722010517,15.8032565687004,11.9295645328192,23.7780247066198,9.52201657345497,24.0587525622393,12.9063581547208,13.599426674155,7.01614149129162,8.4470934268197,11.2006721774334,13.7635531729117,7.15807354827843,6.75443611967459,6.36011234118612,14.7885590765515,8.98285341900225,20.3844191765317,14.2213340630666,13.6389355837065,11.6545538118545,11.62706223534,12.5602267690966,54.3769555659061,18.5552673831031,18.0424739836781,19.1813251336649,12.2226213545711,15.5244319769201,23.0473865985981,11.0586600370114,11.3709685157812,14.1707369781513,16.8076004870476,15.6913844448987,13.9130156630048,19.3950101254089,9.31958806090611,23.4224637609238,15.9179497178226,14.3055950916811,29.7141508774682,19.7967901227825,26.3035370041244,18.4242486467932,16.9275223042892,21.1099311549612,17.3824320192276,19.1786592997748,17.0386196538839,17.1975738851823,19.960515314662,14.8044295026011,22.492325500597,16.2040229032585,21.8602344177342,22.0706020256134,17.2859644613135,19.2902166829715,22.1798987233329,20.8825364064305,20.2395725049014,22.5071932542944,21.1256633074185,24.2055782614809,25.3369618796086,16.001288467213,23.9120634334014,18.1091126591527,17.4914815946752,27.2676945541336,23.87524836865,24.4480511758979,22.4489164522518,21.1268287986212,17.5894544985822,13.6847166710371,17.0456209621351,18.6926020160034,15.8895126274,16.509910077279,12.8771232671817,16.3471479314037,21.228220638839,16.2525789438304,16.1326930996253,14.7661987299586,16.4662586468288,13.5548482947975,14.5100064509248,19.3460671273055,4.29544417878937,9.78467096655114,19.4092307987063,23.6881405297647,25.3868898804524,15.7313149206207,16.9007313322101,14.4571475845545,16.6085171540579,14.493508015713,15.3314477368164,11.5394753783867,13.6474860983384,18.8752075817387,10.1584883441106,10.7536287557358,13.0870851657626,22.735454009336,22.5415471346161,18.9395734896142,24.0501084087856,26.3710682787598,21.6901322336203,14.9086249459398,13.5018905943582,9.99517027766584,13.3403682189217,20.8556382145118,19.6558995113203,18.2138311031732,15.2145091041377,19.0529956204409,18.0784354764808,11.5078454980324,17.0241988113787,15.3754391385326,14.3768206527355,10.4199465347181,17.4741096944154,11.1134706296729,10.9432422248366,7.23665282045051,14.965008403495,23.3074436477696,22.1632367961155,22.9155865796504,15.7242466353296,17.9231695462743,14.9967493758189,14.0496226457615,19.5467578691677,18.1601045511995,22.9614866866781,16.877921415721,15.7143333497965,12.0058718622655,7.53956419696361,13.053736411649,15.2446924635901,15.452457793065,14.9312048688647,16.5268478095006,8.85248705034047,12.876017287423,24.9251493338843,26.5498346121714,20.8960695800815,21.9851294116348,20.4974780155803,18.1168979704853,21.4549671887694,16.3663280430335,19.3691011193797,16.3873871375122,21.5748929516568,15.6697731227185,27.3650091714008,17.9817434040064,13.2745138339963,13.8384962608339,17.8370898609203,9.8074641473067,7.67784921490009,15.0643222492524,21.4495483329624,22.5390912276053,16.0423820273125,28.1272714562876,11.5960469432499,19.5957532171555,22.46901397975,17.4659261210371,9.9606186512721,13.7175702420219,19.6847659342924,15.5180871313801,14.3157647923845,11.8741330154694,15.4883327322049,16.522901527378,12.3495902910779,15.9939665353236,21.6362331772513,21.1095237248546,20.4126708245363,23.1438668640536,11.9507143018239,15.2048747648618,20.5045056957423,17.9556575128004,19.4454253738197,18.4601087864597,23.7847956234584,21.5051482814131,38.2451467486174,39.3263581029479,36.208393136759,3.81868247206045,21.9853515538889,20.73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| |phase1_expression=16.4953312517938,4.18770489167233,1.36499771816861,4.83942738090928,4.50806156951712,13.5982210248631,15.8856595604957,32.5390775072772,149.236045480767,157.993555267346,112.490205124157,121.014365195925,40.4033722637646,39.7762831006438,25.649451659806,22.6772299476605,16.7894850750755,35.6472246854809,39.6260713120585,26.7365480632759,34.18740264073,17.9716621673602,17.7615856614476,12.6394014006791,10.3234176480227,3.44539178469012,4.30761996159075,6.24866574789078,5.70070258369122,7.05684363327806,9.09095093686749,33.6566256933605,41.2093407681662,15.8481681015439,25.9966457776147,19.9481574430191,30.8295727956177,5.85944283031671,7.0320181007142,7.85285615960697,5.88231488031014,5.46436387966757,8.73918635456076,14.9817213390937,15.7134243390248,17.8040349596831,3.9119567217402,4.14247797122848,2.41654801007919,5.8328969722285,4.05960622713551,4.31257693094915,38.7577819993371,31.9159342484992,32.9371923159615,10.2903774414379,23.7822755149168,8.76642556871652,10.1158230429799,16.9277113367051,13.9442908771359,5.08266798103698,4.4464739805557,4.49949858640699,3.9554654502679,2.1314403448383,1.49800055259202,4.61061966385865,15.0349937847293,10.6654691282036,14.9330722559481,6.56997264128748,9.27647871996777,17.1487118900936,9.39285615978716,12.8690630125403,15.4162233399144,12.896421146604,15.3606533256243,10.8146755938759,9.14876436024097,13.022834263919,9.77140496504833,14.069065250792,13.7518422999129,16.2045722010517,15.8032565687004,11.9295645328192,23.7780247066198,9.52201657345497,24.0587525622393,12.9063581547208,13.599426674155,7.01614149129162,8.4470934268197,11.2006721774334,13.7635531729117,7.15807354827843,6.75443611967459,6.36011234118612,14.7885590765515,8.98285341900225,20.3844191765317,14.2213340630666,13.6389355837065,11.6545538118545,11.62706223534,12.5602267690966,54.3769555659061,18.5552673831031,18.0424739836781,19.1813251336649,12.2226213545711,15.5244319769201,23.0473865985981,11.0586600370114,11.3709685157812,14.1707369781513,16.8076004870476,15.6913844448987,13.9130156630048,19.3950101254089,9.31958806090611,23.4224637609238,15.9179497178226,14.3055950916811,29.7141508774682,19.7967901227825,26.3035370041244,18.4242486467932,16.9275223042892,21.1099311549612,17.3824320192276,19.1786592997748,17.0386196538839,17.1975738851823,19.960515314662,14.8044295026011,22.492325500597,16.2040229032585,21.8602344177342,22.0706020256134,17.2859644613135,19.2902166829715,22.1798987233329,20.8825364064305,20.2395725049014,22.5071932542944,21.1256633074185,24.2055782614809,25.3369618796086,16.001288467213,23.9120634334014,18.1091126591527,17.4914815946752,27.2676945541336,23.87524836865,24.4480511758979,22.4489164522518,21.1268287986212,17.5894544985822,13.6847166710371,17.0456209621351,18.6926020160034,15.8895126274,16.509910077279,12.8771232671817,16.3471479314037,21.228220638839,16.2525789438304,16.1326930996253,14.7661987299586,16.4662586468288,13.5548482947975,14.5100064509248,19.3460671273055,4.29544417878937,9.78467096655114,19.4092307987063,23.6881405297647,25.3868898804524,15.7313149206207,16.9007313322101,14.4571475845545,16.6085171540579,14.493508015713,15.3314477368164,11.5394753783867,13.6474860983384,18.8752075817387,10.1584883441106,10.7536287557358,13.0870851657626,22.735454009336,22.5415471346161,18.9395734896142,24.0501084087856,26.3710682787598,21.6901322336203,14.9086249459398,13.5018905943582,9.99517027766584,13.3403682189217,20.8556382145118,19.6558995113203,18.2138311031732,15.2145091041377,19.0529956204409,18.0784354764808,11.5078454980324,17.0241988113787,15.3754391385326,14.3768206527355,10.4199465347181,17.4741096944154,11.1134706296729,10.9432422248366,7.23665282045051,14.965008403495,23.3074436477696,22.1632367961155,22.9155865796504,15.7242466353296,17.9231695462743,14.9967493758189,14.0496226457615,19.5467578691677,18.1601045511995,22.9614866866781,16.877921415721,15.7143333497965,12.0058718622655,7.53956419696361,13.053736411649,15.2446924635901,15.452457793065,14.9312048688647,16.5268478095006,8.85248705034047,12.876017287423,24.9251493338843,26.5498346121714,20.8960695800815,21.9851294116348,20.4974780155803,18.1168979704853,21.4549671887694,16.3663280430335,19.3691011193797,16.3873871375122,21.5748929516568,15.6697731227185,27.3650091714008,17.9817434040064,13.2745138339963,13.8384962608339,17.8370898609203,9.8074641473067,7.67784921490009,15.0643222492524,21.4495483329624,22.5390912276053,16.0423820273125,28.1272714562876,11.5960469432499,19.5957532171555,22.46901397975,17.4659261210371,9.9606186512721,13.7175702420219,19.6847659342924,15.5180871313801,14.3157647923845,11.8741330154694,15.4883327322049,16.522901527378,12.3495902910779,15.9939665353236,21.6362331772513,21.1095237248546,20.4126708245363,23.1438668640536,11.9507143018239,15.2048747648618,20.5045056957423,17.9556575128004,19.4454253738197,18.4601087864597,23.7847956234584,21.5051482814131,38.2451467486174,39.3263581029479,36.208393136759,3.81868247206045,21.9853515538889,20.73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| ||
|short_description=p1@Spata5 | |||
}} | }} |
Latest revision as of 23:45, 1 October 2015
Short description: | p1@Spata5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Spata5_5end |
Coexpression cluster: | MCL_coexpression_mm9:327 |
Association with transcript: | 0bp_to_ENSMUST00000029277, NM_001163511, NM_021343, uc008pau.2, uc008pav.2, uc012coy.1_5end |
EntrezGene: | Spata5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 8.06e-08 | 32 |
hematopoietic oligopotent progenitor cell | 8.06e-08 | 32 |
hematopoietic stem cell | 8.06e-08 | 32 |
hematopoietic multipotent progenitor cell | 8.06e-08 | 32 |
mature alpha-beta T cell | 4.66e-07 | 9 |
alpha-beta T cell | 4.66e-07 | 9 |
immature T cell | 4.66e-07 | 9 |
mature T cell | 4.66e-07 | 9 |
immature alpha-beta T cell | 4.66e-07 | 9 |
lymphoid lineage restricted progenitor cell | 6.11e-07 | 12 |
lymphocyte | 7.14e-07 | 13 |
common lymphoid progenitor | 7.14e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
gonad | 7.26e-07 | 18 |
gonad primordium | 7.26e-07 | 18 |