FFCP PHASE1:Mm9::chr4:133309830..133309841,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr4:133309830..133309841,-
|short_description=p10@Arid1a
|description=CAGE_peak_10_at_Arid1a_5end
|association_with_transcript=55bp_to_ENSMUST00000138473_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=93760 | |EntrezGene=93760 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=55bp_to_ENSMUST00000138473_5end | |||
|cluster_id=chr4:133309830..133309841,- | |||
|description=CAGE_peak_10_at_Arid1a_5end | |||
|id=chr4:133309830..133309841,- | |||
|ontology_enrichment_celltype=CL:0000221!1.61e-14!44;CL:0000133!1.61e-14!44;CL:0002319!5.11e-14!43;CL:0000055!6.59e-12!50;CL:0000540!3.81e-11!33;CL:0000047!3.81e-11!33;CL:0000031!3.81e-11!33;CL:0000404!3.81e-11!33;CL:0000393!6.99e-10!39;CL:0000211!6.99e-10!39;CL:0000117!6.71e-09!23;CL:0000337!6.71e-09!23;CL:0002321!2.71e-07!70;CL:0000220!2.71e-07!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.44e-18,44;CL:0000133,1.44e-18,44;CL:0002319,7.48e-18,43;CL:0000540,4.89e-15,33;CL:0000047,4.89e-15,33;CL:0000031,4.89e-15,33;CL:0000404,4.89e-15,33;CL:0000393,1.10e-13,39;CL:0000211,1.10e-13,39;CL:0000117,1.69e-12,23;CL:0000337,1.69e-12,23;CL:0002321,1.03e-10,70;CL:0002609,4.69e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!5.67e-07!75;UBERON:0001016!5.67e-07!75;UBERON:0004121!6.59e-07!102;UBERON:0000924!6.59e-07!102;UBERON:0006601!6.59e-07!102;UBERON:0001017!7.29e-07!73;UBERON:0005743!7.29e-07!73 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,2.29e-10,95;UBERON:0000924,2.29e-10,95;UBERON:0006601,2.29e-10,95;UBERON:0001017,6.82e-09,73;UBERON:0001016,2.51e-08,75 | |||
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| ||
|short_description=p10@Arid1a | |||
}} | }} |
Latest revision as of 11:41, 26 September 2015
Short description: | p10@Arid1a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_Arid1a_5end |
Coexpression cluster: | NA |
Association with transcript: | 55bp_to_ENSMUST00000138473_5end |
EntrezGene: | Arid1a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.44e-18 | 44 |
neurectodermal cell | 1.44e-18 | 44 |
neural cell | 7.48e-18 | 43 |
neuron | 4.89e-15 | 33 |
neuronal stem cell | 4.89e-15 | 33 |
neuroblast | 4.89e-15 | 33 |
electrically signaling cell | 4.89e-15 | 33 |
electrically responsive cell | 1.10e-13 | 39 |
electrically active cell | 1.10e-13 | 39 |
CNS neuron (sensu Vertebrata) | 1.69e-12 | 23 |
neuroblast (sensu Vertebrata) | 1.69e-12 | 23 |
embryonic cell | 1.03e-10 | 70 |
neuron of cerebral cortex | 4.69e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 2.29e-10 | 95 |
ectoderm | 2.29e-10 | 95 |
presumptive ectoderm | 2.29e-10 | 95 |
central nervous system | 6.82e-09 | 73 |
nervous system | 2.51e-08 | 75 |