FFCP PHASE1:Mm9::chr5:122552679..122552743,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:122552679..122552743,+
|short_description=p2@Myl2
|description=CAGE_peak_2_at_Myl2_5end
|association_with_transcript=-444bp_to_ENSMUST00000123913_5end
|En...") |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=17906 | |EntrezGene=17906 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=19 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-444bp_to_ENSMUST00000123913_5end | |||
|cluster_id=chr5:122552679..122552743,+ | |||
|description=CAGE_peak_2_at_Myl2_5end | |||
|id=chr5:122552679..122552743,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,2.66e-10,3;DOID:4045,2.66e-10,3 | |||
|ontology_enrichment_uberon=UBERON:0007100!1.61e-19!18;UBERON:0000948!1.61e-19!18;UBERON:0005498!1.61e-19!18;UBERON:0004140!1.61e-19!18;UBERON:0009881!1.61e-19!18;UBERON:0004141!1.61e-19!18;UBERON:0003084!1.61e-19!18;UBERON:0007005!1.61e-19!18;UBERON:0004139!1.61e-19!18;UBERON:0004291!1.61e-19!18;UBERON:0004535!2.41e-15!23;UBERON:0001009!2.41e-15!23;UBERON:0004872!7.37e-11!33;UBERON:0003103!1.23e-07!43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,9.78e-49,18;UBERON:0000948,9.78e-49,18;UBERON:0005498,9.78e-49,18;UBERON:0004140,9.78e-49,18;UBERON:0009881,9.78e-49,18;UBERON:0004141,9.78e-49,18;UBERON:0003084,9.78e-49,18;UBERON:0007005,9.78e-49,18;UBERON:0004139,9.78e-49,18;UBERON:0004291,9.78e-49,18;UBERON:0004535,1.80e-37,23;UBERON:0001009,1.80e-37,23;UBERON:0004872,3.63e-25,33;UBERON:0003103,1.41e-18,43;UBERON:0003914,1.00e-16,47;UBERON:0003081,1.10e-08,87;UBERON:0000926,4.49e-08,120;UBERON:0004120,4.49e-08,120;UBERON:0006603,4.49e-08,120;UBERON:0000383,6.87e-08,10;UBERON:0010314,5.53e-07,92 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.09265815368454,3.1253413780952,1.57057123192139,5.29408339227913,6.83045484958446,3.39857247121808,0,0,0.183546752161682,0,0,0.219686182734472,0,0,0,0,0,0,0,0.573066879877513,1.54701627683233,0.202316460859598,0,0,0,0,0,0,0.7104801149461,0,0,0,0.135005938331691,0,0,0,0.122490799214954,0,0,0,0.127687338085188,0.153606533256243,0.131886287730194,0.182975287204819,0,0.279182999001381,0,0.15279824777681,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0.884610551949874,0.161766849947409,0.662524555381181,0.969750506270444,0,0,0,0,0,0,0,0.299581278809645,0.457500602818626,0,0,0,0.20778804455956,0,0,0.248813941220186,0,0,0,0,0,0,0,0.384341160854549,0,0,0,0,0,0,0,0,0,0,0,0,0,13.0489236697366,15.2441938987713,23.5881300513929,19.4130683179872,24.9890574319203,28.0766145455028,36.2752953810636,30.314894358157,35.9637254490882,45.5830784260341,57.6227798917624,35.2649321524472,40.0587965545411,31.8347667172023,34.6252560401759,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.610953983535943,0,0,0.126473074248515,0,0,0,0,0.83422552858047,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0.651859905768103,0,0.234690248288502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76729649043061,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0.120195449519969,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415149390336707,0,0.682934423016537,0.243106717068294,0,0.367687016900028,1.11123363900808,0.618105171716683,0.320919209591815,0.758091635291392,0.50695859978048,1.13175804831646,0.468207537349412,0.320125762024346,0.287177344778066,0,0.231768651889711,0.192909220463705,0.824171801606613,0,0,0.177475806159338,0,0.290692833264657,0.470546902076653,0.676916863133412,0.365855945745545,0,0.543216455383447,2.80571135828869,0.355905054372522,0.394017929502254,0.409231043169689,0,0.192906610981141,0,0.233931608445408,0.429742108096597,0,0.661774257358546,0.927471342481686 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.09265815368454,3.1253413780952,1.57057123192139,5.29408339227913,6.83045484958446,3.39857247121808,0,0,0.183546752161682,0,0,0.219686182734472,0,0,0,0,0,0,0,0.573066879877513,1.54701627683233,0.202316460859598,0,0,0,0,0,0,0.7104801149461,0,0,0,0.135005938331691,0,0,0,0.122490799214954,0,0,0,0.127687338085188,0.153606533256243,0.131886287730194,0.182975287204819,0,0.279182999001381,0,0.15279824777681,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0.884610551949874,0.161766849947409,0.662524555381181,0.969750506270444,0,0,0,0,0,0,0,0.299581278809645,0.457500602818626,0,0,0,0.20778804455956,0,0,0.248813941220186,0,0,0,0,0,0,0,0.384341160854549,0,0,0,0,0,0,0,0,0,0,0,0,0,13.0489236697366,15.2441938987713,23.5881300513929,19.4130683179872,24.9890574319203,28.0766145455028,36.2752953810636,30.314894358157,35.9637254490882,45.5830784260341,57.6227798917624,35.2649321524472,40.0587965545411,31.8347667172023,34.6252560401759,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.610953983535943,0,0,0.126473074248515,0,0,0,0,0.83422552858047,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0.651859905768103,0,0.234690248288502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76729649043061,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0.120195449519969,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415149390336707,0,0.682934423016537,0.243106717068294,0,0.367687016900028,1.11123363900808,0.618105171716683,0.320919209591815,0.758091635291392,0.50695859978048,1.13175804831646,0.468207537349412,0.320125762024346,0.287177344778066,0,0.231768651889711,0.192909220463705,0.824171801606613,0,0,0.177475806159338,0,0.290692833264657,0.470546902076653,0.676916863133412,0.365855945745545,0,0.543216455383447,2.80571135828869,0.355905054372522,0.394017929502254,0.409231043169689,0,0.192906610981141,0,0.233931608445408,0.429742108096597,0,0.661774257358546,0.927471342481686 | ||
|short_description=p2@Myl2 | |||
}} | }} |
Latest revision as of 19:48, 1 October 2015
Short description: | p2@Myl2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Myl2_5end |
Coexpression cluster: | MCL_coexpression_mm9:19 |
Association with transcript: | -444bp_to_ENSMUST00000123913_5end |
EntrezGene: | Myl2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 9.78e-49 | 18 |
heart | 9.78e-49 | 18 |
primitive heart tube | 9.78e-49 | 18 |
primary heart field | 9.78e-49 | 18 |
anterior lateral plate mesoderm | 9.78e-49 | 18 |
heart tube | 9.78e-49 | 18 |
heart primordium | 9.78e-49 | 18 |
cardiac mesoderm | 9.78e-49 | 18 |
cardiogenic plate | 9.78e-49 | 18 |
heart rudiment | 9.78e-49 | 18 |
cardiovascular system | 1.80e-37 | 23 |
circulatory system | 1.80e-37 | 23 |
splanchnic layer of lateral plate mesoderm | 3.63e-25 | 33 |
compound organ | 1.41e-18 | 43 |
epithelial tube | 1.00e-16 | 47 |
lateral plate mesoderm | 1.10e-08 | 87 |
mesoderm | 4.49e-08 | 120 |
mesoderm-derived structure | 4.49e-08 | 120 |
presumptive mesoderm | 4.49e-08 | 120 |
musculature of body | 6.87e-08 | 10 |
structure with developmental contribution from neural crest | 5.53e-07 | 92 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 2.66e-10 | 3 |
muscle cancer | 2.66e-10 | 3 |