FFCP PHASE1:Mm9::chr5:129710202..129710207,+: Difference between revisions
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|id=chr5:129710202..129710207,+
|short_description=p@chr5:129710202..129710207,+
|description=CAGE_peak_at_chr5:129710202..129710207,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=58 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr5:129710202..129710207,+ | |||
|description=CAGE_peak_at_chr5:129710202..129710207,+ | |||
|id=chr5:129710202..129710207,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,8.20e-18,3;CL:0000239,1.85e-15,6;CL:0000677,1.85e-15,6;CL:0000584,1.85e-15,6;CL:0000066,1.25e-13,25;CL:0000075,2.76e-13,7;CL:0002563,2.23e-10,9;CL:0002251,2.23e-10,9;CL:0002076,2.78e-09,15;CL:0000473,6.14e-08,7;CL:0000223,6.32e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!9.20e-07!15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,2.99e-29,15;UBERON:0001242,2.72e-20,13;UBERON:0001262,2.72e-20,13;UBERON:0004786,2.72e-20,13;UBERON:0004923,6.51e-18,24;UBERON:0000331,1.18e-16,3;UBERON:0002116,1.18e-16,3;UBERON:0001204,1.18e-16,3;UBERON:0001168,1.18e-16,3;UBERON:0001962,9.22e-13,2;UBERON:0001961,9.22e-13,2;UBERON:0001744,9.22e-13,2;UBERON:0002108,1.20e-12,4;UBERON:0003350,2.23e-10,9;UBERON:0004808,2.23e-10,9;UBERON:0001277,2.23e-10,9;UBERON:0002465,8.48e-09,3;UBERON:0000485,1.60e-08,11;UBERON:0000160,3.75e-08,31;UBERON:0003199,3.59e-07,1 | |||
|phase1_expression=0.160148847104794,4.18770489167233,10.4649825059593,0,0,6.04365378882803,18.221785966451,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,16.4792195477209,15.8292403936347,12.0588712464154,8.61523992318149,10.5580904016086,3.99049180858385,1.00812051903972,3.76941868114018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0,0,0,0,0,0,0,0,0.257259436035947,0.573066879877513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0.702222100658759,0.511290967734173,1.29893002301434,2.12003744706204,0,1.28326477414318,0,0,0,0,0,0.5709193985953,0,0,0,0.608930956624282,0,0,0.23517741427141,0,0,0.289198713839823,0,0.161766849947409,0,0.484875253135222,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.465067889500816,0,0,0.16455984991348,0,0.243206428637567,0,0,0,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0.163863314715738,0,0.144649058581512,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0.178065603667255,0,0.329940245945071,0,0.242780636154981,0,0,0.590603785761546,0.307435147943927,0.516856586336442,0,0.356497378384721,0.316036757935816,1.05418608574999,0,0,0,0,0,0,0,0,0,0.23467170806371,0.63549621259146,0,0.16488625294148,0.161464426695906,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.539457385539283,0.247960367176008,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.965947970160952,0.375364950902364,0.183151624267265,0,0.501572104035363,0,0.460325236507177,0,0,0,0,0,0,0.453142408984205,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0.377252682772152,0.0936415074698824,0,0.0574354689556133,0,0.115884325944855,0.38581844092741,0,0,0.342869252385415,0,0,0.145346416632329,0.0941093804153306,0,0,0.263069711437843,0,0,0,0,0,0,0,0.249810577937946,0,0.214871054048298,0.191288332068843,0,0.463735671240843 | |phase1_expression=0.160148847104794,4.18770489167233,10.4649825059593,0,0,6.04365378882803,18.221785966451,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,16.4792195477209,15.8292403936347,12.0588712464154,8.61523992318149,10.5580904016086,3.99049180858385,1.00812051903972,3.76941868114018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0,0,0,0,0,0,0,0,0.257259436035947,0.573066879877513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0.702222100658759,0.511290967734173,1.29893002301434,2.12003744706204,0,1.28326477414318,0,0,0,0,0,0.5709193985953,0,0,0,0.608930956624282,0,0,0.23517741427141,0,0,0.289198713839823,0,0.161766849947409,0,0.484875253135222,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.465067889500816,0,0,0.16455984991348,0,0.243206428637567,0,0,0,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0.163863314715738,0,0.144649058581512,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0.178065603667255,0,0.329940245945071,0,0.242780636154981,0,0,0.590603785761546,0.307435147943927,0.516856586336442,0,0.356497378384721,0.316036757935816,1.05418608574999,0,0,0,0,0,0,0,0,0,0.23467170806371,0.63549621259146,0,0.16488625294148,0.161464426695906,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.539457385539283,0.247960367176008,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.965947970160952,0.375364950902364,0.183151624267265,0,0.501572104035363,0,0.460325236507177,0,0,0,0,0,0,0.453142408984205,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0.377252682772152,0.0936415074698824,0,0.0574354689556133,0,0.115884325944855,0.38581844092741,0,0,0.342869252385415,0,0,0.145346416632329,0.0941093804153306,0,0,0.263069711437843,0,0,0,0,0,0,0,0.249810577937946,0,0.214871054048298,0.191288332068843,0,0.463735671240843 | ||
|short_description=p@chr5:129710202..129710207,+ | |||
}} | }} |
Latest revision as of 08:39, 6 August 2015
Short description: | p@chr5:129710202..129710207, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:129710202..129710207, + |
Coexpression cluster: | MCL_coexpression_mm9:58 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 8.20e-18 | 3 |
brush border epithelial cell | 1.85e-15 | 6 |
gut absorptive cell | 1.85e-15 | 6 |
enterocyte | 1.85e-15 | 6 |
epithelial cell | 1.25e-13 | 25 |
columnar/cuboidal epithelial cell | 2.76e-13 | 7 |
intestinal epithelial cell | 2.23e-10 | 9 |
epithelial cell of alimentary canal | 2.23e-10 | 9 |
endo-epithelial cell | 2.78e-09 | 15 |
defensive cell | 6.14e-08 | 7 |
endodermal cell | 6.32e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa | 2.99e-29 | 15 |
intestinal mucosa | 2.72e-20 | 13 |
wall of intestine | 2.72e-20 | 13 |
gastrointestinal system mucosa | 2.72e-20 | 13 |
organ component layer | 6.51e-18 | 24 |
ileal mucosa | 1.18e-16 | 3 |
ileum | 1.18e-16 | 3 |
mucosa of small intestine | 1.18e-16 | 3 |
wall of small intestine | 1.18e-16 | 3 |
gut-associated lymphoid tissue | 9.22e-13 | 2 |
mucosa-associated lymphoid tissue | 9.22e-13 | 2 |
lymphoid tissue | 9.22e-13 | 2 |
small intestine | 1.20e-12 | 4 |
epithelium of mucosa | 2.23e-10 | 9 |
gastrointestinal system epithelium | 2.23e-10 | 9 |
intestinal epithelium | 2.23e-10 | 9 |
lymphoid system | 8.48e-09 | 3 |
simple columnar epithelium | 1.60e-08 | 11 |
intestine | 3.75e-08 | 31 |
egg chamber | 3.59e-07 | 1 |