FFCP PHASE1:Mm9::chr9:55278195..55278209,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr9:55278195..55278209,+
|short_description=p@chr9:55278195..55278209,+
|description=CAGE_peak_at_chr9:55278195..55278209,+
|association_with_transcript=NA
|E...") |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3710 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr9:55278195..55278209,+ | |||
|description=CAGE_peak_at_chr9:55278195..55278209,+ | |||
|id=chr9:55278195..55278209,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.12e-19,9;CL:0002251,1.12e-19,9;CL:0000066,2.84e-16,25;CL:0000075,2.08e-13,7;CL:0000682,2.49e-12,3;CL:0002076,1.87e-11,15;CL:0002250,2.37e-11,3;CL:0000239,1.43e-10,6;CL:0000677,1.43e-10,6;CL:0000584,1.43e-10,6;CL:0000223,2.29e-08,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!5.41e-11!43;UBERON:0005409!5.98e-10!59;UBERON:0000344!6.57e-07!15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,2.30e-23,15;UBERON:0000485,1.64e-20,11;UBERON:0003350,1.12e-19,9;UBERON:0004808,1.12e-19,9;UBERON:0001277,1.12e-19,9;UBERON:0001242,2.36e-17,13;UBERON:0001262,2.36e-17,13;UBERON:0004786,2.36e-17,13;UBERON:0004923,5.93e-14,24;UBERON:0000160,3.78e-10,31;UBERON:0001962,1.64e-08,2;UBERON:0001961,1.64e-08,2;UBERON:0001744,1.64e-08,2;UBERON:0005409,2.13e-07,47 | |||
|phase1_expression=0.160148847104794,11.5161884520989,15.0149748998547,0,0,9.73699777088961,14.0167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,10.5594999043648,10.3234176480227,11.4846392823004,10.7690499039769,17.8841123129288,0,0.504060259519861,5.54326276638262,0,0,0,4.04392267651784,4.98703936075477,2.24586291888606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0.633831403506179,0,0,0,0,0,0,0,0,0.135005938331691,0,0.285650984403804,0.220868540951614,0,0.0958454710182364,0,0,0,0,0.131886287730194,0.0914876436024097,0,0.279182999001381,0,0,0,0,0.559198337475902,0.075726193333184,0,0.579728977403356,0,0,0,0,0,0.421333260395256,0,0,0,1.97180787687353,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0.289198713839823,0,0,0,0,1.86391761218122,0.292780797011547,0,0.255457055208591,0,0,0,0,0,0.628271760564322,0,0,0,0,0,0,0,0,0.130120442962704,0.229902104433473,0,0.150704817835715,0.136072998302656,0.2562274405697,0,0,0.646703978798527,0.378212160335639,0.703804496655795,0.657587197282725,0.834141747676794,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.793351699990633,0,0,0.257734922644187,0,0.444756087689741,0.190225626112559,0,0,0.754005626400808,0.198956472041151,0.38992817423824,1.79763881730844,0.432276099749388,0.398282546508734,0.189667900953082,0,0,0.203651327845314,0.387904974335251,0.210407459670956,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0.851640511249612,0,0.325773918707152,0.494910368917606,0,0.485561272309963,3.62788268357701,2.07465587731488,1.77181135728464,0.307435147943927,0.258428293168221,0.363533729477506,0,1.58018378967908,0,0,1.02131881726136,0.540183282093931,0.388076051348264,0.214337035031592,0.354680467284547,0.356737635204141,0.658196082408484,0,0,0,0,0.32977250588296,0.161464426695906,0.72375509913787,0.954978752025092,2.46211349617592,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,1.01659733563424,0.432021363287205,0.836353184057875,0,0.134864346384821,0.165306911450672,0,0.518459893167171,0,0.56369293868419,0,0.165458490457098,0.388902376688095,0.387479470433193,0.506868376472335,0.117357238645754,0.2604087696879,0.209718688851422,0,0,0,0,0,0,0,0.198681354781265,0,0.147689527174577,0,0.0762068066549998,0,0,0,0.116876902181569,2.49403421976732,0,0,0,0,0,0.36630324853453,19.7218908752741,0,0,0,0,0,0,0.755393897389701,0,0,0,0,0,0.399024873401031,0.341467211508268,0,0.209613162627982,0,0,0.206035057238894,0,0,0,0.188626341386076,0,0.192075457214608,0.0574354689556133,0,0.115884325944855,0.38581844092741,0,0.147198920134397,0,0,0,0,0.376437521661322,0.0846146078916765,0,0.263069711437843,0,0,0.118635018124174,0.0985044823755635,0.409231043169689,0,0.192906610981141,0,0.233931608445408,0.214871054048298,0,0.220591419119515,0 | |phase1_expression=0.160148847104794,11.5161884520989,15.0149748998547,0,0,9.73699777088961,14.0167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,10.5594999043648,10.3234176480227,11.4846392823004,10.7690499039769,17.8841123129288,0,0.504060259519861,5.54326276638262,0,0,0,4.04392267651784,4.98703936075477,2.24586291888606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0.633831403506179,0,0,0,0,0,0,0,0,0.135005938331691,0,0.285650984403804,0.220868540951614,0,0.0958454710182364,0,0,0,0,0.131886287730194,0.0914876436024097,0,0.279182999001381,0,0,0,0,0.559198337475902,0.075726193333184,0,0.579728977403356,0,0,0,0,0,0.421333260395256,0,0,0,1.97180787687353,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0.289198713839823,0,0,0,0,1.86391761218122,0.292780797011547,0,0.255457055208591,0,0,0,0,0,0.628271760564322,0,0,0,0,0,0,0,0,0.130120442962704,0.229902104433473,0,0.150704817835715,0.136072998302656,0.2562274405697,0,0,0.646703978798527,0.378212160335639,0.703804496655795,0.657587197282725,0.834141747676794,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.793351699990633,0,0,0.257734922644187,0,0.444756087689741,0.190225626112559,0,0,0.754005626400808,0.198956472041151,0.38992817423824,1.79763881730844,0.432276099749388,0.398282546508734,0.189667900953082,0,0,0.203651327845314,0.387904974335251,0.210407459670956,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0.851640511249612,0,0.325773918707152,0.494910368917606,0,0.485561272309963,3.62788268357701,2.07465587731488,1.77181135728464,0.307435147943927,0.258428293168221,0.363533729477506,0,1.58018378967908,0,0,1.02131881726136,0.540183282093931,0.388076051348264,0.214337035031592,0.354680467284547,0.356737635204141,0.658196082408484,0,0,0,0,0.32977250588296,0.161464426695906,0.72375509913787,0.954978752025092,2.46211349617592,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,1.01659733563424,0.432021363287205,0.836353184057875,0,0.134864346384821,0.165306911450672,0,0.518459893167171,0,0.56369293868419,0,0.165458490457098,0.388902376688095,0.387479470433193,0.506868376472335,0.117357238645754,0.2604087696879,0.209718688851422,0,0,0,0,0,0,0,0.198681354781265,0,0.147689527174577,0,0.0762068066549998,0,0,0,0.116876902181569,2.49403421976732,0,0,0,0,0,0.36630324853453,19.7218908752741,0,0,0,0,0,0,0.755393897389701,0,0,0,0,0,0.399024873401031,0.341467211508268,0,0.209613162627982,0,0,0.206035057238894,0,0,0,0.188626341386076,0,0.192075457214608,0.0574354689556133,0,0.115884325944855,0.38581844092741,0,0.147198920134397,0,0,0,0,0.376437521661322,0.0846146078916765,0,0.263069711437843,0,0,0.118635018124174,0.0985044823755635,0.409231043169689,0,0.192906610981141,0,0.233931608445408,0.214871054048298,0,0.220591419119515,0 | ||
|short_description=p@chr9:55278195..55278209,+ | |||
}} | }} |
Latest revision as of 08:19, 5 August 2015
Short description: | p@chr9:55278195..55278209, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:55278195..55278209, + |
Coexpression cluster: | MCL_coexpression_mm9:3710 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.12e-19 | 9 |
epithelial cell of alimentary canal | 1.12e-19 | 9 |
epithelial cell | 2.84e-16 | 25 |
columnar/cuboidal epithelial cell | 2.08e-13 | 7 |
M cell of gut | 2.49e-12 | 3 |
endo-epithelial cell | 1.87e-11 | 15 |
intestinal crypt stem cell | 2.37e-11 | 3 |
brush border epithelial cell | 1.43e-10 | 6 |
gut absorptive cell | 1.43e-10 | 6 |
enterocyte | 1.43e-10 | 6 |
endodermal cell | 2.29e-08 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa | 2.30e-23 | 15 |
simple columnar epithelium | 1.64e-20 | 11 |
epithelium of mucosa | 1.12e-19 | 9 |
gastrointestinal system epithelium | 1.12e-19 | 9 |
intestinal epithelium | 1.12e-19 | 9 |
intestinal mucosa | 2.36e-17 | 13 |
wall of intestine | 2.36e-17 | 13 |
gastrointestinal system mucosa | 2.36e-17 | 13 |
organ component layer | 5.93e-14 | 24 |
intestine | 3.78e-10 | 31 |
gut-associated lymphoid tissue | 1.64e-08 | 2 |
mucosa-associated lymphoid tissue | 1.64e-08 | 2 |
lymphoid tissue | 1.64e-08 | 2 |
gastrointestinal system | 2.13e-07 | 47 |