FFCP PHASE1:Mm9::chr9:76429828..76429851,-: Difference between revisions
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|id=chr9:76429828..76429851,-
|short_description=p@chr9:76429828..76429851,-
|description=CAGE_peak_at_chr9:76429828..76429851,-
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr9:76429828..76429851,- | |||
|description=CAGE_peak_at_chr9:76429828..76429851,- | |||
|id=chr9:76429828..76429851,- | |||
|ontology_enrichment_celltype=CL:0000239!2.49e-09!6;CL:0000677!2.49e-09!6;CL:0000212!2.49e-09!6;CL:0000584!2.49e-09!6;CL:0002563!2.55e-09!9;CL:0002251!2.55e-09!9;CL:0000075!8.07e-08!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,3.91e-14,6;CL:0000677,3.91e-14,6;CL:0000584,3.91e-14,6;CL:0000075,5.32e-12,7;CL:0002563,3.74e-09,9;CL:0002251,3.74e-09,9;CL:0000682,3.48e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!3.60e-25!43;UBERON:0005409!3.08e-22!59;UBERON:0000344!1.01e-16!15;UBERON:0001242!5.30e-14!13;UBERON:0000060!5.30e-14!13;UBERON:0001262!5.30e-14!13;UBERON:0004786!5.30e-14!13;UBERON:0003350!2.55e-09!9;UBERON:0004808!2.55e-09!9;UBERON:0001277!2.55e-09!9;UBERON:0004923!6.93e-09!24;UBERON:0000485!2.75e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.38e-45,31;UBERON:0005409,6.15e-35,47;UBERON:0000344,1.99e-20,15;UBERON:0001242,3.04e-16,13;UBERON:0001262,3.04e-16,13;UBERON:0004786,3.04e-16,13;UBERON:0001007,2.69e-12,116;UBERON:0001555,2.69e-12,116;UBERON:0007026,2.69e-12,116;UBERON:0004119,5.76e-12,118;UBERON:0000925,5.76e-12,118;UBERON:0006595,5.76e-12,118;UBERON:0004923,1.01e-11,24;UBERON:0004921,2.24e-10,114;UBERON:0003350,3.74e-09,9;UBERON:0004808,3.74e-09,9;UBERON:0001277,3.74e-09,9;UBERON:0002108,5.46e-09,4;UBERON:0000485,2.42e-07,11;UBERON:0000331,7.13e-07,3;UBERON:0002116,7.13e-07,3;UBERON:0001204,7.13e-07,3;UBERON:0001168,7.13e-07,3 | |||
|phase1_expression=0,47.1116800313137,45.9549231783431,17.5429242557961,25.0447864973174,8.56184286750638,2.56973904655078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.4790301175561,21.3350631392468,17.8011908875656,22.3996238002719,20.4697671051595,8.93110071444957,7.81293402255785,6.43018480900384,0,0,0,0.577703239502549,0.498703936075477,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,4.5673551887624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.59175283654366,0,0,15.3274233125155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,30.3985280345094,10.0491215332147,0,0.232236671860439,11.7269389803105,15.1262643467507,11.3412802360884,11.7939888189787,14.2358718463353,9.22314146454461,10.0534083520108,9.15199771389294,14.8172706210531,12.5834717211591,24.4235996358404,21.706398784726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.906970670894253,0,0,0,1.03371317267288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.7803310344209,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48412283890143,0,1.09181281873089,0.269728692769641,0.165306911450672,0,9.0730481304255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70174701947806,0.209613162627982,0.367687016900028,0.666740183404846,0.618105171716683,0.962757628775446,0.252697211763798,0.25347929989024,0.188626341386076,1.49826411951812,0.832326981263301,1.09127391015665,0,0.579421629724277,0.964546102318525,0.412085900803307,0.294397840268795,1.02860775715625,0.532427418478012,0.715308569841963,0.145346416632329,0.846984423737976,0.930760686808441,0.914639864363863,0,0.679020569229309,0,0.593175090620871,0.197008964751127,0,0.929621047115796,0.385813221962283,0,1.16965804222704,0.429742108096597,0,0,0 | |phase1_expression=0,47.1116800313137,45.9549231783431,17.5429242557961,25.0447864973174,8.56184286750638,2.56973904655078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.4790301175561,21.3350631392468,17.8011908875656,22.3996238002719,20.4697671051595,8.93110071444957,7.81293402255785,6.43018480900384,0,0,0,0.577703239502549,0.498703936075477,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,4.5673551887624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.59175283654366,0,0,15.3274233125155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,30.3985280345094,10.0491215332147,0,0.232236671860439,11.7269389803105,15.1262643467507,11.3412802360884,11.7939888189787,14.2358718463353,9.22314146454461,10.0534083520108,9.15199771389294,14.8172706210531,12.5834717211591,24.4235996358404,21.706398784726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.906970670894253,0,0,0,1.03371317267288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.7803310344209,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48412283890143,0,1.09181281873089,0.269728692769641,0.165306911450672,0,9.0730481304255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70174701947806,0.209613162627982,0.367687016900028,0.666740183404846,0.618105171716683,0.962757628775446,0.252697211763798,0.25347929989024,0.188626341386076,1.49826411951812,0.832326981263301,1.09127391015665,0,0.579421629724277,0.964546102318525,0.412085900803307,0.294397840268795,1.02860775715625,0.532427418478012,0.715308569841963,0.145346416632329,0.846984423737976,0.930760686808441,0.914639864363863,0,0.679020569229309,0,0.593175090620871,0.197008964751127,0,0.929621047115796,0.385813221962283,0,1.16965804222704,0.429742108096597,0,0,0 | ||
|short_description=p@chr9:76429828..76429851,- | |||
}} | }} |
Latest revision as of 15:51, 5 August 2015
Short description: | p@chr9:76429828..76429851, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:76429828..76429851, - |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 3.91e-14 | 6 |
gut absorptive cell | 3.91e-14 | 6 |
enterocyte | 3.91e-14 | 6 |
columnar/cuboidal epithelial cell | 5.32e-12 | 7 |
intestinal epithelial cell | 3.74e-09 | 9 |
epithelial cell of alimentary canal | 3.74e-09 | 9 |
M cell of gut | 3.48e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.38e-45 | 31 |
gastrointestinal system | 6.15e-35 | 47 |
mucosa | 1.99e-20 | 15 |
intestinal mucosa | 3.04e-16 | 13 |
wall of intestine | 3.04e-16 | 13 |
gastrointestinal system mucosa | 3.04e-16 | 13 |
digestive system | 2.69e-12 | 116 |
digestive tract | 2.69e-12 | 116 |
primitive gut | 2.69e-12 | 116 |
endoderm-derived structure | 5.76e-12 | 118 |
endoderm | 5.76e-12 | 118 |
presumptive endoderm | 5.76e-12 | 118 |
organ component layer | 1.01e-11 | 24 |
subdivision of digestive tract | 2.24e-10 | 114 |
epithelium of mucosa | 3.74e-09 | 9 |
gastrointestinal system epithelium | 3.74e-09 | 9 |
intestinal epithelium | 3.74e-09 | 9 |
small intestine | 5.46e-09 | 4 |
simple columnar epithelium | 2.42e-07 | 11 |
ileal mucosa | 7.13e-07 | 3 |
ileum | 7.13e-07 | 3 |
mucosa of small intestine | 7.13e-07 | 3 |
wall of small intestine | 7.13e-07 | 3 |