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{{UBERON
{{UBERON
|id=UBERON:0008780
|alt_id=
|name=inner cell mass derived epiblast
|namespace=
|def=
|xref=EHDAA:42;;EHDAA:75;;EHDAA2:0000444;;EMAPA:16050;;ncithesaurus:Epiblast
|is_a=UBERON:0002532
|synonym="embryonic epiblast" RELATED [MP:0003886]
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def=
|subset=early_development
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=UBERON:0000087
|develops_from=UBERON:0000087
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0008780
|is_a=UBERON:0002532
|is_obsolete=
|located_in=
|located_in=
|name=inner cell mass derived epiblast
|namespace=FANTOM
|obo_creation_date=
|part_of=UBERON:0000091
|part_of=UBERON:0000091
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|subset=early_development
|synonym="embryonic epiblast" RELATED [MP:0003886]
|union_of=
|xref=EHDAA2:0000444;;EHDAA:42;;EHDAA:75;;EMAPA:16050;;ncithesaurus:Epiblast
}}
}}

Latest revision as of 18:03, 12 September 2014

Name:inner cell mass derived epiblast
Namespace:FANTOM
Xrefs:
links:

EHDAA2:0000444
EHDAA:42
EHDAA:75
EMAPA:16050

ncithesaurus:Epiblast
Synonyms: "embryonic epiblast" RELATED [MP:0003886]
Subset: early_development

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0002532(epiblast (generic))
develops_from:UBERON:0000087(inner cell mass)
part_of:UBERON:0000091(bilaminar disc)



Children

develops from:UBERON:0005728 (extraembryonic mesoderm)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology



Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0008780 (inner cell mass derived epiblast), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
5.79e-79FFCP PHASE2:Hg19::chr10:120921270..120921282,-#_564adf8d6af28d95280948e5a5163e11p@chr10:120921270..120921282, -
5.79e-79FFCP PHASE2:Hg19::chr7:135931480..135931486,+#_564adf8d6af28d95280948e5a5163e11p@chr7:135931480..135931486, +
5.79e-79FFCP PHASE1:Hg19::chr7:135931480..135931486,+#_564adf8d6af28d95280948e5a5163e11p@chr7:135931480..135931486, +
5.79e-79FFCP PHASE1:Hg19::chr10:120921270..120921282,-#_564adf8d6af28d95280948e5a5163e11p@chr10:120921270..120921282, -
2.16e-63FFCP PHASE1:Hg19::chr1:205744117..205744127,-#_49ea8b0b111d28d28063b3d58c5db9c6p8@RAB7L1
2.16e-63FFCP PHASE2:Hg19::chr1:205744117..205744127,-#_49ea8b0b111d28d28063b3d58c5db9c6p8@RAB7L1
1.1e-59FFCP PHASE1:Hg19::chr1:146746588..146746604,+#_02bffc3a048704eb1816ba62ee2dee34p5@CHD1L
1.1e-59FFCP PHASE1:Hg19::chr4:36393818..36393829,-#_02bffc3a048704eb1816ba62ee2dee34p2@ENST00000504344
1.1e-59FFCP PHASE1:Hg19::chr19:42682291..42682301,-#_02bffc3a048704eb1816ba62ee2dee34p@chr19:42682291..42682301, -
1.1e-59FFCP PHASE2:Hg19::chr8:42248931..42248936,+#_02bffc3a048704eb1816ba62ee2dee34p6@VDAC3
1.1e-59FFCP PHASE2:Hg19::chr3:119279086..119279095,+#_02bffc3a048704eb1816ba62ee2dee34p@chr3:119279086..119279095, +
1.1e-59FFCP PHASE1:Hg19::chr7:106397647..106397655,+#_02bffc3a048704eb1816ba62ee2dee34p@chr7:106397647..106397655, +
1.1e-59FFCP PHASE2:Hg19::chr7:45954667..45954675,-#_02bffc3a048704eb1816ba62ee2dee34p42@IGFBP3
1.1e-59FFCP PHASE1:Hg19::chr15:43323772..43323785,-#_02bffc3a048704eb1816ba62ee2dee34p@chr15:43323772..43323785, -
1.1e-59FFCP PHASE2:Hg19::chr7:106363901..106363915,-#_02bffc3a048704eb1816ba62ee2dee34p@chr7:106363901..106363915, -
1.1e-59FFCP PHASE1:Hg19::chr10:15035404..15035424,-#_02bffc3a048704eb1816ba62ee2dee34p@chr10:15035404..15035424, -
1.1e-59FFCP PHASE1:Hg19::chr4:167951900..167951907,-#_02bffc3a048704eb1816ba62ee2dee34p@chr4:167951900..167951907, -
1.1e-59FFCP PHASE1:Hg19::chr3:189266272..189266296,-#_02bffc3a048704eb1816ba62ee2dee34p@chr3:189266272..189266296, -
1.1e-59FFCP PHASE2:Hg19::chr2:65209811..65209818,+#_02bffc3a048704eb1816ba62ee2dee34p@chr2:65209811..65209818, +
1.1e-59FFCP PHASE2:Hg19::chr2:148293218..148293252,+#_02bffc3a048704eb1816ba62ee2dee34p@chr2:148293218..148293252, +
1.1e-59FFCP PHASE2:Hg19::chr1:177159780..177159790,-#_02bffc3a048704eb1816ba62ee2dee34p@chr1:177159780..177159790, -
1.1e-59FFCP PHASE2:Hg19::chr14:76957827..76957835,+#_02bffc3a048704eb1816ba62ee2dee34p@chr14:76957827..76957835, +
1.1e-59FFCP PHASE1:Hg19::chr6:149464325..149464336,-#_02bffc3a048704eb1816ba62ee2dee34p@chr6:149464325..149464336, -
1.1e-59FFCP PHASE1:Hg19::chr8:59790413..59790418,-#_02bffc3a048704eb1816ba62ee2dee34p@chr8:59790413..59790418, -
1.1e-59FFCP PHASE2:Hg19::chr9:74995293..74995311,-#_02bffc3a048704eb1816ba62ee2dee34p@chr9:74995293..74995311, -
1.1e-59FFCP PHASE2:Hg19::chr10:30336924..30336935,-#_02bffc3a048704eb1816ba62ee2dee34p15@KIAA1462
1.1e-59FFCP PHASE2:Hg19::chr6:87324200..87324219,+#_02bffc3a048704eb1816ba62ee2dee34p@chr6:87324200..87324219, +
1.1e-59FFCP PHASE2:Hg19::chr3:45926344..45926350,-#_02bffc3a048704eb1816ba62ee2dee34p@chr3:45926344..45926350, -
1.1e-59FFCP PHASE1:Hg19::chr2:148282641..148282654,+#_02bffc3a048704eb1816ba62ee2dee34p@chr2:148282641..148282654, +
1.1e-59FFCP PHASE1:Hg19::chr14:76957827..76957835,+#_02bffc3a048704eb1816ba62ee2dee34p@chr14:76957827..76957835, +
1.1e-59FFCP PHASE2:Hg19::chr1:234765107..234765117,+#_02bffc3a048704eb1816ba62ee2dee34p7@LINC00184
1.1e-59FFCP PHASE2:Hg19::chr19:53511749..53511757,-#_02bffc3a048704eb1816ba62ee2dee34p@chr19:53511749..53511757, -
1.1e-59FFCP PHASE2:Hg19::chr10:111805643..111805655,-#_02bffc3a048704eb1816ba62ee2dee34p@chr10:111805643..111805655, -
1.1e-59FFCP PHASE2:Hg19::chr7:135705379..135705388,+#_02bffc3a048704eb1816ba62ee2dee34p@chr7:135705379..135705388, +
1.1e-59FFCP PHASE2:Hg19::chr21:18179795..18179798,-#_02bffc3a048704eb1816ba62ee2dee34p@chr21:18179795..18179798, -
1.1e-59FFCP PHASE2:Hg19::chr6:138023015..138023024,-#_02bffc3a048704eb1816ba62ee2dee34p@chr6:138023015..138023024, -
1.1e-59FFCP PHASE2:Hg19::chr10:15035404..15035424,-#_02bffc3a048704eb1816ba62ee2dee34p@chr10:15035404..15035424, -
1.1e-59FFCP PHASE1:Hg19::chr2:53245239..53245255,-#_02bffc3a048704eb1816ba62ee2dee34p@chr2:53245239..53245255, -
1.1e-59FFCP PHASE1:Hg19::chr3:180050773..180050786,+#_02bffc3a048704eb1816ba62ee2dee34p@chr3:180050773..180050786, +
1.1e-59FFCP PHASE1:Hg19::chr21:18170731..18170736,-#_02bffc3a048704eb1816ba62ee2dee34p@chr21:18170731..18170736, -
1.1e-59FFCP PHASE2:Hg19::chr4:6191002..6191007,-#_02bffc3a048704eb1816ba62ee2dee34p@chr4:6191002..6191007, -
1.1e-59FFCP PHASE1:Hg19::chr9:74986248..74986275,-#_02bffc3a048704eb1816ba62ee2dee34p@chr9:74986248..74986275, -
1.1e-59FFCP PHASE1:Hg19::chr6:88854777..88854802,-#_02bffc3a048704eb1816ba62ee2dee34p16@CNR1
1.1e-59FFCP PHASE1:Hg19::chr3:45926373..45926388,-#_02bffc3a048704eb1816ba62ee2dee34p@chr3:45926373..45926388, -
1.1e-59FFCP PHASE2:Hg19::chr7:142250929..142250940,-#_02bffc3a048704eb1816ba62ee2dee34p3@AF430683, p3@AF430684, p3@AF430685
1.1e-59FFCP PHASE2:Hg19::chr4:167951727..167951732,-#_02bffc3a048704eb1816ba62ee2dee34p@chr4:167951727..167951732, -
1.1e-59FFCP PHASE2:Hg19::chr21:43934831..43934840,+#_02bffc3a048704eb1816ba62ee2dee34p@chr21:43934831..43934840, +
1.1e-59FFCP PHASE2:Hg19::chr8:56625901..56625913,+#_02bffc3a048704eb1816ba62ee2dee34p@chr8:56625901..56625913, +
1.1e-59FFCP PHASE2:Hg19::chr2:228216588..228216609,+#_02bffc3a048704eb1816ba62ee2dee34p10@MFF
1.1e-59FFCP PHASE2:Hg19::chr19:42682242..42682253,-#_02bffc3a048704eb1816ba62ee2dee34p@chr19:42682242..42682253, -
1.1e-59FFCP PHASE2:Hg19::chr17:64034078..64034124,-#_02bffc3a048704eb1816ba62ee2dee34p@chr17:64034078..64034124, -
1.1e-59FFCP PHASE2:Hg19::chr7:106397632..106397643,+#_02bffc3a048704eb1816ba62ee2dee34p@chr7:106397632..106397643, +
1.1e-59FFCP PHASE1:Hg19::chr4:167983163..167983209,-#_02bffc3a048704eb1816ba62ee2dee34p@chr4:167983163..167983209, -
1.1e-59FFCP PHASE2:Hg19::chr19:7599792..7599797,+#_02bffc3a048704eb1816ba62ee2dee34p@chr19:7599792..7599797, +
1.1e-59FFCP PHASE1:Hg19::chr10:61574767..61574776,-#_02bffc3a048704eb1816ba62ee2dee34p@chr10:61574767..61574776, -
1.1e-59FFCP PHASE2:Hg19::chr4:167748986..167748989,-#_02bffc3a048704eb1816ba62ee2dee34p@chr4:167748986..167748989, -
1.1e-59FFCP PHASE1:Hg19::chr19:40074306..40074328,+#_02bffc3a048704eb1816ba62ee2dee34p@chr19:40074306..40074328, +
1.1e-59FFCP PHASE2:Hg19::chr9:75002215..75002221,-#_02bffc3a048704eb1816ba62ee2dee34p@chr9:75002215..75002221, -
1.1e-59FFCP PHASE2:Hg19::chr20:22771662..22771675,+#_02bffc3a048704eb1816ba62ee2dee34p@chr20:22771662..22771675, +
1.1e-59FFCP PHASE2:Hg19::chr19:31524425..31524444,-#_02bffc3a048704eb1816ba62ee2dee34p@chr19:31524425..31524444, -
1.1e-59FFCP PHASE2:Hg19::chr20:39574012..39574015,+#_02bffc3a048704eb1816ba62ee2dee34p@chr20:39574012..39574015, +
1.1e-59FFCP PHASE1:Hg19::chr6:42362820..42362827,-#_02bffc3a048704eb1816ba62ee2dee34p@chr6:42362820..42362827, -
1.1e-59FFCP PHASE1:Hg19::chr4:167932279..167932291,-#_02bffc3a048704eb1816ba62ee2dee34p@chr4:167932279..167932291, -
1.1e-59FFCP PHASE2:Hg19::chr8:12548586..12548602,-#_02bffc3a048704eb1816ba62ee2dee34p@chr8:12548586..12548602, -
1.1e-59FFCP PHASE2:Hg19::chr2:148279057..148279078,+#_02bffc3a048704eb1816ba62ee2dee34p@chr2:148279057..148279078, +
1.1e-59FFCP PHASE2:Hg19::chr1:172807491..172807499,-#_02bffc3a048704eb1816ba62ee2dee34p@chr1:172807491..172807499, -
1.1e-59FFCP PHASE2:Hg19::chr14:76957754..76957760,+#_02bffc3a048704eb1816ba62ee2dee34p@chr14:76957754..76957760, +
1.1e-59FFCP PHASE1:Hg19::chr3:119281371..119281382,-#_02bffc3a048704eb1816ba62ee2dee34p@chr3:119281371..119281382, -
1.1e-59FFCP PHASE1:Hg19::chr2:228216610..228216617,+#_02bffc3a048704eb1816ba62ee2dee34p18@MFF
1.1e-59FFCP PHASE1:Hg19::chr22:37484379..37484392,+#_02bffc3a048704eb1816ba62ee2dee34p@chr22:37484379..37484392, +
1.1e-59FFCP PHASE2:Hg19::chr9:74981579..74981583,-#_02bffc3a048704eb1816ba62ee2dee34p@chr9:74981579..74981583, -
1.1e-59FFCP PHASE2:Hg19::chr1:207627342..207627349,+#_02bffc3a048704eb1816ba62ee2dee34p3@CR2
1.1e-59FFCP PHASE1:Hg19::chr7:102945487..102945492,+#_02bffc3a048704eb1816ba62ee2dee34p@chr7:102945487..102945492, +
1.1e-59FFCP PHASE1:Hg19::chr3:75655787..75655802,-#_02bffc3a048704eb1816ba62ee2dee34p@chr3:75655787..75655802, -
1.1e-59FFCP PHASE2:Hg19::chr19:10987850..10987854,+#_02bffc3a048704eb1816ba62ee2dee34p@chr19:10987850..10987854, +
1.1e-59FFCP PHASE1:Hg19::chr14:76957754..76957760,+#_02bffc3a048704eb1816ba62ee2dee34p@chr14:76957754..76957760, +
1.1e-59FFCP PHASE1:Hg19::chr10:120921294..120921306,-#_02bffc3a048704eb1816ba62ee2dee34p@chr10:120921294..120921306, -
1.1e-59FFCP PHASE1:Hg19::chr21:18180062..18180079,-#_02bffc3a048704eb1816ba62ee2dee34p@chr21:18180062..18180079, -
1.1e-59FFCP PHASE1:Hg19::chr12:24889813..24889821,-#_02bffc3a048704eb1816ba62ee2dee34p@chr12:24889813..24889821, -
1.1e-59FFCP PHASE1:Hg19::chr9:74996801..74996811,-#_02bffc3a048704eb1816ba62ee2dee34p@chr9:74996801..74996811, -
1.1e-59FFCP PHASE2:Hg19::chr15:43323789..43323811,-#_02bffc3a048704eb1816ba62ee2dee34p@chr15:43323789..43323811, -
1.1e-59FFCP PHASE1:Hg19::chr20:22771722..22771733,+#_02bffc3a048704eb1816ba62ee2dee34p@chr20:22771722..22771733, +
1.1e-59FFCP PHASE2:Hg19::chr6:484706..484722,+#_02bffc3a048704eb1816ba62ee2dee34p@chr6:484706..484722, +
1.1e-59FFCP PHASE2:Hg19::chr4:167982726..167982736,-#_02bffc3a048704eb1816ba62ee2dee34p@chr4:167982726..167982736, -
1.1e-59FFCP PHASE1:Hg19::chr2:11264766..11264775,-#_02bffc3a048704eb1816ba62ee2dee34p@chr2:11264766..11264775, -
1.1e-59FFCP PHASE1:Hg19::chr19:49488905..49488920,-#_02bffc3a048704eb1816ba62ee2dee34p@chr19:49488905..49488920, -
1.1e-59FFCP PHASE2:Hg19::chr8:59790413..59790418,-#_02bffc3a048704eb1816ba62ee2dee34p@chr8:59790413..59790418, -
1.1e-59FFCP PHASE2:Hg19::chr10:61574767..61574776,-#_02bffc3a048704eb1816ba62ee2dee34p@chr10:61574767..61574776, -
1.1e-59FFCP PHASE1:Hg19::chr6:138023078..138023089,-#_02bffc3a048704eb1816ba62ee2dee34p@chr6:138023078..138023089, -
1.1e-59FFCP PHASE1:Hg19::chr8:38216859..38216889,-#_02bffc3a048704eb1816ba62ee2dee34p@chr8:38216859..38216889, -
1.1e-59FFCP PHASE1:Hg19::chr3:195306434..195306439,-#_02bffc3a048704eb1816ba62ee2dee34p10@APOD
1.1e-59FFCP PHASE2:Hg19::chr12:24889813..24889821,-#_02bffc3a048704eb1816ba62ee2dee34p@chr12:24889813..24889821, -
1.1e-59FFCP PHASE1:Hg19::chr16:86326031..86326033,+#_02bffc3a048704eb1816ba62ee2dee34p@chr16:86326031..86326033, +
1.1e-59FFCP PHASE2:Hg19::chr7:45954712..45954720,-#_02bffc3a048704eb1816ba62ee2dee34p41@IGFBP3
1.1e-59FFCP PHASE2:Hg19::chr12:77198556..77198565,+#_02bffc3a048704eb1816ba62ee2dee34p@chr12:77198556..77198565, +
1.1e-59FFCP PHASE1:Hg19::chr15:43323789..43323811,-#_02bffc3a048704eb1816ba62ee2dee34p@chr15:43323789..43323811, -
1.1e-59FFCP PHASE2:Hg19::chrX:146004822..146004839,-#_02bffc3a048704eb1816ba62ee2dee34p@chrX:146004822..146004839, -
1.1e-59FFCP PHASE1:Hg19::chr10:15035430..15035449,-#_02bffc3a048704eb1816ba62ee2dee34p@chr10:15035430..15035449, -
1.1e-59FFCP PHASE1:Hg19::chr4:167957459..167957470,-#_02bffc3a048704eb1816ba62ee2dee34p@chr4:167957459..167957470, -
1.1e-59FFCP PHASE1:Hg19::chr21:43934923..43934932,+#_02bffc3a048704eb1816ba62ee2dee34p@chr21:43934923..43934932, +

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