FFCP PHASE1:Hg19::chr10:113975134..113975163,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:113975134..113975163,- to FFCP PHASE1:Hg19::chr10:113975134..113975163,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57678 | |EntrezGene=57678 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24865 | |HGNC=24865 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000480130_5end | |||
|cluster_id=chr10:113975134..113975163,- | |||
|coexpression_cluster_id=C29 | |||
|description=CAGE_peak_2_at_GPAM_5end | |||
|id=chr10:113975134..113975163,- | |||
|ontology_enrichment_celltype=CL:0000136!4.44e-19!15;CL:0000181!1.83e-07!12;CL:0000417!1.83e-07!12;CL:0000668!1.83e-07!12;CL:0000414!1.83e-07!12;CL:0000412!1.83e-07!12;CL:0000182!1.83e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000136;3.49e-28;13!CL:0000182;5.18e-10;12!CL:0002521;6.72e-08;3!CL:0002615;9.99e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,6.84e-24,15;CL:0000182,5.29e-10,12;CL:0002521,6.72e-08,3;CL:0002615,1.02e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0003104;7.94e-11;31!UBERON:0004161;1.02e-10;11!UBERON:0009497;7.78e-09;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.93e-14!115;UBERON:0002107!1.41e-08!19;UBERON:0006925!1.41e-08!19;UBERON:0008836!1.41e-08!19;UBERON:0005057!4.38e-08!26;UBERON:0009854!9.08e-08!23;UBERON:0001013!2.82e-07!14;UBERON:0008835!6.55e-07!22;UBERON:0003894!6.55e-07!22;UBERON:0009497!8.62e-07!25;UBERON:0000015!8.62e-07!25;UBERON:0002423!8.62e-07!25;UBERON:0006235!8.62e-07!25;UBERON:0004161!8.62e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.96e-09;19!UBERON:0006925;2.96e-09;19!UBERON:0003688;3.01e-09;6!UBERON:0002358;3.01e-09;6!UBERON:0003684;3.01e-09;6!UBERON:0001178;3.01e-09;6!UBERON:0001443;1.42e-08;11!UBERON:0002365;3.40e-08;31!UBERON:0002330;3.40e-08;31!UBERON:0002423;5.91e-08;25!UBERON:0002190;6.72e-08;3!UBERON:0000310;4.65e-07;10!UBERON:0006947;5.64e-07;3!UBERON:0004054;5.64e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.42e-14,114;UBERON:0002107,3.02e-09,19;UBERON:0006925,3.02e-09,19;UBERON:0008836,3.02e-09,19;UBERON:0003688,3.17e-09,6;UBERON:0002358,3.17e-09,6;UBERON:0003684,3.17e-09,6;UBERON:0001178,3.17e-09,6;UBERON:0009854,6.32e-09,23;UBERON:0001443,1.39e-08,11;UBERON:0002365,1.74e-08,31;UBERON:0002330,1.74e-08,31;UBERON:0009497,6.01e-08,25;UBERON:0000015,6.01e-08,25;UBERON:0002423,6.01e-08,25;UBERON:0006235,6.01e-08,25;UBERON:0004161,6.01e-08,25;UBERON:0002190,6.72e-08,3;UBERON:0009569,8.92e-08,112;UBERON:0008835,1.10e-07,22;UBERON:0003894,1.10e-07,22;UBERON:0009856,1.32e-07,26;UBERON:0000310,4.52e-07,10;UBERON:0006947,5.04e-07,3;UBERON:0004054,5.04e-07,3;UBERON:0002417,5.76e-07,60;UBERON:0000916,5.76e-07,60 | |||
|phase1_expression=11.082381135504,371.892609998638,57.7913056793482,21.0153926541574,75.0894638637843,4.36169262050184,405.279805069297,25.2687949370732,188.053652303884,0,0,0,0,0,0,2.01697543935533,0,0,0,0,0,0,0,0,0,0,0,0.157421562627358,0,0,0,0,0,0,0.0774672005803016,1.56386155736164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.10818394441079,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,50.7020139287323,139.561464768223,63.8053099215916,0,16.7264276418634,0,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.5286935227246,0,0,0,0,0.43596006883328,0.07333828582095,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0.325736184293735,0.355391948742546,0,0.301439377059586,1.74306691720059,0.399891964728228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.10419213877515,0,0,0,0,0,0,0,0,0,0,0,8.93188108147597,3.83654933220156,2.52594084989766,8.45718385087626,0,8.68611174175481,0,0.308419387605311,0.355123450626254,0,0,0.116210378459959,2.65890789101569,0,0,0,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,53.4782850451679,0,0,0,0,0,0,0,0,0.413509717453592,1.82614416276065,0.290033387828457,0.255679882248303,0,0,0,0,0,0.464845549297286,0.62962469366128,0.6970372701606,0,0,0.869932992075073,0,0,0,0,0.38126038784765,0,0,0.318203247925937,0,0,0.274537029736055,0.824686816419805,0,1.58510321173008,0.842516912477962,0,0,0,0,0.282810863907425,0,3.30819206127675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,56.1097052629604,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,156.763751820927,0,0.111443384277478,0,0,0,0,0,0,0,0,0,8.96615947129814,21.8264293269607,0,0,0.492339221844278,0,0,0,0,5.22810049875748,0,0,15.5093239375235,0,0,0,0,49.299971129566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,2.05095700524602,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,1.55488378577335,0,11.9431431729421,20.2567822712647,0.611030144933625,0.593042257361244,1.11207545051853,3.13265848516366,0.269604531922708,15.248975298677,0,0,0,0,3.94584402849391,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,33.5475203024698,0,0,0,0,0.0969890164884194,0,1.12990370390266,0,0,0,0,0,9.81883775801022,0,0,0,28.82795964081,0,0,0,0,0,0,4.91216002832582,0,0,0,0,1.05154941711726,15.0812496687017,78.8311858600192,0,3.79390100948083,9.87219910714113,4.68660060627932,0.268733889946905,0.360299883542404,22.1342304102162,2.9937609276745,3.29663433524666,4.04421263125109,0,1.1007533168552,0,0.136203406111576,0,0,0,0,0,0,0,0.157611414598396,0.472091293214983,0,0,0,18.5820784857075,0.662091970365432,0,0,0,0,0,0,0.681552087141687,0,26.5259542957329,21.2011022259554,0.129282956361551,0.13223260174269,0,0,3.09683496446315,0,1.65695622138878,9.42715441442707,0.395223263795889,2.19226677085613,0,457.518972633728,570.319508901643,416.936329975071,636.40077620773,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,2.83584125485061,0.934853239388898,0,0,0,0,0,0,26.890635700821,0,0,0,5.7447294044216,0,0,0.521745061811734,6.16056196888596,0,0,0.181848659202559,2.7926744831047,4.17630383890644,0,0,0.343395705182793,0.673498977531838,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,4.744291701454,0,6.98941684428889,0.169732529954025,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,34.5402393120025,63.0188196554404,0,0,0,0,0,0,0,0.115233987555779,0.171488009437418,0.0679697329768317,0,0,0,0.156986185701028,0,0,3.65263488203798,0.647782773655864,0,3.85973338553944,0,0,0,0,0,0,0,1.72090943528111,0.118332000730565,0.0852134047591577,10.1612892045823,0,0,0,0,0,0,1.29485767437579,3.2852098193999,5.799072156691,270.055312140882,0,0.198950775161368,0,0,0.109940516745429,0,0.231522474323834,0,0,1.22574160876953,0,0,0,14.792950465419,0,0.469919589899268,0.128915775947154,0,0,0,0,0,14.2206077855408,0,0,0,0.872701380680755,0.5290268405154,0,0,0,0,0,0.253397002022874,0,0,0,0,6.36541065033211,7.23503151421682,0,0,15.3528466968706,0,0,0.434523000071005,0,0.509177266225319,1.0105859447911,3.26575121845442,5.13349951627922,0.942928742204225,2.65372159952903,0.332660356546013,0,0,0,0,18.7712753922763,0,0,1.99727032255654,61.9923284260361,0 | |phase1_expression=11.082381135504,371.892609998638,57.7913056793482,21.0153926541574,75.0894638637843,4.36169262050184,405.279805069297,25.2687949370732,188.053652303884,0,0,0,0,0,0,2.01697543935533,0,0,0,0,0,0,0,0,0,0,0,0.157421562627358,0,0,0,0,0,0,0.0774672005803016,1.56386155736164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.10818394441079,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,50.7020139287323,139.561464768223,63.8053099215916,0,16.7264276418634,0,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.5286935227246,0,0,0,0,0.43596006883328,0.07333828582095,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0.325736184293735,0.355391948742546,0,0.301439377059586,1.74306691720059,0.399891964728228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.10419213877515,0,0,0,0,0,0,0,0,0,0,0,8.93188108147597,3.83654933220156,2.52594084989766,8.45718385087626,0,8.68611174175481,0,0.308419387605311,0.355123450626254,0,0,0.116210378459959,2.65890789101569,0,0,0,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,53.4782850451679,0,0,0,0,0,0,0,0,0.413509717453592,1.82614416276065,0.290033387828457,0.255679882248303,0,0,0,0,0,0.464845549297286,0.62962469366128,0.6970372701606,0,0,0.869932992075073,0,0,0,0,0.38126038784765,0,0,0.318203247925937,0,0,0.274537029736055,0.824686816419805,0,1.58510321173008,0.842516912477962,0,0,0,0,0.282810863907425,0,3.30819206127675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,56.1097052629604,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,156.763751820927,0,0.111443384277478,0,0,0,0,0,0,0,0,0,8.96615947129814,21.8264293269607,0,0,0.492339221844278,0,0,0,0,5.22810049875748,0,0,15.5093239375235,0,0,0,0,49.299971129566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,2.05095700524602,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,1.55488378577335,0,11.9431431729421,20.2567822712647,0.611030144933625,0.593042257361244,1.11207545051853,3.13265848516366,0.269604531922708,15.248975298677,0,0,0,0,3.94584402849391,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,33.5475203024698,0,0,0,0,0.0969890164884194,0,1.12990370390266,0,0,0,0,0,9.81883775801022,0,0,0,28.82795964081,0,0,0,0,0,0,4.91216002832582,0,0,0,0,1.05154941711726,15.0812496687017,78.8311858600192,0,3.79390100948083,9.87219910714113,4.68660060627932,0.268733889946905,0.360299883542404,22.1342304102162,2.9937609276745,3.29663433524666,4.04421263125109,0,1.1007533168552,0,0.136203406111576,0,0,0,0,0,0,0,0.157611414598396,0.472091293214983,0,0,0,18.5820784857075,0.662091970365432,0,0,0,0,0,0,0.681552087141687,0,26.5259542957329,21.2011022259554,0.129282956361551,0.13223260174269,0,0,3.09683496446315,0,1.65695622138878,9.42715441442707,0.395223263795889,2.19226677085613,0,457.518972633728,570.319508901643,416.936329975071,636.40077620773,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,2.83584125485061,0.934853239388898,0,0,0,0,0,0,26.890635700821,0,0,0,5.7447294044216,0,0,0.521745061811734,6.16056196888596,0,0,0.181848659202559,2.7926744831047,4.17630383890644,0,0,0.343395705182793,0.673498977531838,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,4.744291701454,0,6.98941684428889,0.169732529954025,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,34.5402393120025,63.0188196554404,0,0,0,0,0,0,0,0.115233987555779,0.171488009437418,0.0679697329768317,0,0,0,0.156986185701028,0,0,3.65263488203798,0.647782773655864,0,3.85973338553944,0,0,0,0,0,0,0,1.72090943528111,0.118332000730565,0.0852134047591577,10.1612892045823,0,0,0,0,0,0,1.29485767437579,3.2852098193999,5.799072156691,270.055312140882,0,0.198950775161368,0,0,0.109940516745429,0,0.231522474323834,0,0,1.22574160876953,0,0,0,14.792950465419,0,0.469919589899268,0.128915775947154,0,0,0,0,0,14.2206077855408,0,0,0,0.872701380680755,0.5290268405154,0,0,0,0,0,0.253397002022874,0,0,0,0,6.36541065033211,7.23503151421682,0,0,15.3528466968706,0,0,0.434523000071005,0,0.509177266225319,1.0105859447911,3.26575121845442,5.13349951627922,0.942928742204225,2.65372159952903,0.332660356546013,0,0,0,0,18.7712753922763,0,0,1.99727032255654,61.9923284260361,0 | ||
|short_description=p2@GPAM | |||
}} | }} |
Latest revision as of 10:14, 16 September 2015
Short description: | p2@GPAM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GPAM_5end |
Coexpression cluster: | C29_mature_adipose_Adipocyte_breast_Lymphatic_vein_heart |
Association with transcript: | 0bp_to_ENST00000480130_5end |
EntrezGene: | GPAM |
HGNC: | 24865 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 6.84e-24 | 15 |
hepatocyte | 5.29e-10 | 12 |
subcutaneous fat cell | 6.72e-08 | 3 |
adipocyte of omentum tissue | 1.02e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.42e-14 | 114 |
liver | 3.02e-09 | 19 |
digestive gland | 3.02e-09 | 19 |
liver bud | 3.02e-09 | 19 |
omentum | 3.17e-09 | 6 |
peritoneum | 3.17e-09 | 6 |
abdominal cavity | 3.17e-09 | 6 |
visceral peritoneum | 3.17e-09 | 6 |
digestive tract diverticulum | 6.32e-09 | 23 |
chest | 1.39e-08 | 11 |
exocrine gland | 1.74e-08 | 31 |
exocrine system | 1.74e-08 | 31 |
epithelium of foregut-midgut junction | 6.01e-08 | 25 |
anatomical boundary | 6.01e-08 | 25 |
hepatobiliary system | 6.01e-08 | 25 |
foregut-midgut junction | 6.01e-08 | 25 |
septum transversum | 6.01e-08 | 25 |
subcutaneous adipose tissue | 6.72e-08 | 3 |
subdivision of trunk | 8.92e-08 | 112 |
hepatic diverticulum | 1.10e-07 | 22 |
liver primordium | 1.10e-07 | 22 |
sac | 1.32e-07 | 26 |
breast | 4.52e-07 | 10 |
male genital duct | 5.04e-07 | 3 |
internal male genitalia | 5.04e-07 | 3 |
abdominal segment of trunk | 5.76e-07 | 60 |
abdomen | 5.76e-07 | 60 |