FFCP PHASE1:Hg19::chr10:13749771..13749780,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:13749771..13749780,- to FFCP PHASE1:Hg19::chr10:13749771..13749780,-: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55691 | |EntrezGene=55691 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25491 | |HGNC=25491 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-14bp_to_ENST00000492155_5end | |||
|cluster_id=chr10:13749771..13749780,- | |||
|coexpression_cluster_id=C36 | |||
|description=CAGE_peak_20_at_FRMD4A_5end | |||
|id=chr10:13749771..13749780,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002591;2.70e-40;1!CL:0000945;5.36e-27;24!CL:0000542;2.58e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0002591,2.21e-40,1;CL:0000945,5.55e-27,24;CL:0000826,5.55e-27,24;CL:0000838,7.03e-13,52;CL:0000542,1.19e-12,53;CL:0000051,1.19e-12,53 | |||
|ontology_enrichment_development_v019=CL:0000051;2.58e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001893!7.75e-12!34;UBERON:0001869!3.18e-11!32;UBERON:0002791!1.31e-10!33;UBERON:0002780!3.29e-09!41;UBERON:0001890!3.29e-09!41;UBERON:0006240!3.29e-09!41;UBERON:0002619!3.53e-09!22;UBERON:0003080!6.60e-09!42;UBERON:0002020!7.36e-09!34;UBERON:0003528!7.36e-09!34;UBERON:0001950!2.51e-08!20;UBERON:0000956!7.61e-08!25;UBERON:0000203!7.61e-08!25;UBERON:0007023!1.41e-07!115;UBERON:0002771!6.15e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000078;6.30e-21;2!UBERON:0002012;6.30e-21;2!UBERON:0008886;6.30e-21;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000078,5.70e-21,2;UBERON:0007497,5.70e-21,2;UBERON:0003643,5.70e-21,2;UBERON:0003504,5.70e-21,2;UBERON:0003469,5.70e-21,2;UBERON:0003496,5.70e-21,2;UBERON:0002012,5.70e-21,2;UBERON:0008886,5.70e-21,2;UBERON:0007303,5.70e-21,2;UBERON:0002061,5.70e-21,2;UBERON:0005432,5.70e-21,2;UBERON:0004363,5.70e-21,2;UBERON:0004145,1.83e-14,3;UBERON:0003498,3.22e-09,5;UBERON:0005985,3.22e-09,5;UBERON:0010188,6.78e-08,6;UBERON:0002539,6.78e-08,6;UBERON:0003351,6.78e-08,6;UBERON:0008816,6.78e-08,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0,3.2857764471619,3.36612416744778,3.30585281517453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0.24666754841716,0,0,0.163461903113459,0,0,0.234321431833797,0,0,0.149448680551801,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.44024217006613,0,0.288239906833923,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260650843404249,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0.532306030317022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421258456238981,0,0.243713489631284,0,0.136499911407986,0,1.13008116620243,0,0,0,0,0,0.202910376962704,0,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0.635020748171649,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0.140669416410513,0.111308705022906,0,0,0,0,0,0,1.10776324914963,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0.173624994933292,0.885741385813839,0.120596438625408,0,0,0,0,0,0,0,0,0,0.359030577639089,0.108647371922008,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0.137041924646751,0,0.189932387867636,0,0.0801588202515337,0,0,0,0,0,0,0,0,0.271808412147228,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0.0671834724867263,0,0,0,0,0,0,0.677386656526276,0,0.272406812223151,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0.314727528809989,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0.406870733204662,0,0,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0.252071696221718,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202612753855184,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0.47775168788705,0.0714765441766563,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0,0,0,0,0,0,0.0939839179798536,0.257831551894309,0,0,0,0,0,0,0,0,0.339957450954573,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0.0757786982182394,0,0,0,0,0,0.0645889098360061,0.124149428591716,0,0,0,0,0,0.0673520530145875,0,0,0.0814032686109745,0,0,0,0,0.122241444182866,0,0,0,0.641136984606466 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0,3.2857764471619,3.36612416744778,3.30585281517453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0.24666754841716,0,0,0.163461903113459,0,0,0.234321431833797,0,0,0.149448680551801,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.44024217006613,0,0.288239906833923,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260650843404249,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0.532306030317022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421258456238981,0,0.243713489631284,0,0.136499911407986,0,1.13008116620243,0,0,0,0,0,0.202910376962704,0,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0.635020748171649,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0.140669416410513,0.111308705022906,0,0,0,0,0,0,1.10776324914963,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0.173624994933292,0.885741385813839,0.120596438625408,0,0,0,0,0,0,0,0,0,0.359030577639089,0.108647371922008,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0.137041924646751,0,0.189932387867636,0,0.0801588202515337,0,0,0,0,0,0,0,0,0.271808412147228,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0.0671834724867263,0,0,0,0,0,0,0.677386656526276,0,0.272406812223151,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0.314727528809989,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0.406870733204662,0,0,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0.252071696221718,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202612753855184,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0.47775168788705,0.0714765441766563,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0,0,0,0,0,0,0.0939839179798536,0.257831551894309,0,0,0,0,0,0,0,0,0.339957450954573,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0.0757786982182394,0,0,0,0,0,0.0645889098360061,0.124149428591716,0,0,0,0,0,0.0673520530145875,0,0,0.0814032686109745,0,0,0,0,0.122241444182866,0,0,0,0.641136984606466 | ||
|short_description=p20@FRMD4A | |||
}} | }} |
Latest revision as of 06:37, 17 September 2015
Short description: | p20@FRMD4A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_FRMD4A_5end |
Coexpression cluster: | C36_B_b_splenic_plasma_xeroderma_adrenal_Burkitt |
Association with transcript: | -14bp_to_ENST00000492155_5end |
EntrezGene: | FRMD4A |
HGNC: | 25491 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 2.21e-40 | 1 |
lymphocyte of B lineage | 5.55e-27 | 24 |
pro-B cell | 5.55e-27 | 24 |
lymphoid lineage restricted progenitor cell | 7.03e-13 | 52 |
lymphocyte | 1.19e-12 | 53 |
common lymphoid progenitor | 1.19e-12 | 53 |
Ontology term | p-value | n |
---|---|---|
mixed ectoderm/mesoderm/endoderm-derived structure | 5.70e-21 | 2 |
developing epithelial placode | 5.70e-21 | 2 |
respiratory system arterial blood vessel | 5.70e-21 | 2 |
respiratory system blood vessel | 5.70e-21 | 2 |
respiratory system artery | 5.70e-21 | 2 |
head blood vessel | 5.70e-21 | 2 |
pulmonary artery | 5.70e-21 | 2 |
pulmonary vascular system | 5.70e-21 | 2 |
pharyngeal vasculature | 5.70e-21 | 2 |
truncus arteriosus | 5.70e-21 | 2 |
aortic sac | 5.70e-21 | 2 |
pharyngeal arch artery | 5.70e-21 | 2 |
outflow tract | 1.83e-14 | 3 |
heart blood vessel | 3.22e-09 | 5 |
coronary vessel | 3.22e-09 | 5 |
protuberance | 6.78e-08 | 6 |
pharyngeal arch | 6.78e-08 | 6 |
pharyngeal epithelium | 6.78e-08 | 6 |
embryonic head | 6.78e-08 | 6 |