FFCP PHASE1:Hg19::chr10:69834517..69834543,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:69834517..69834543,- to FFCP PHASE1:Hg19::chr10:69834517..69834543,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=26091 | |EntrezGene=26091 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24521 | |HGNC=24521 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=70bp_to_ENST00000505760_5end | |||
|cluster_id=chr10:69834517..69834543,- | |||
|coexpression_cluster_id=C2068 | |||
|description=CAGE_peak_5_at_HERC4_5end | |||
|id=chr10:69834517..69834543,- | |||
|ontology_enrichment_celltype=CL:0000548!2.21e-11!679;CL:0000004!2.21e-11!679;CL:0000255!2.21e-11!679;CL:0000012!2.87e-11!682;CL:0000057!7.10e-10!75;CL:0002620!1.02e-09!23;CL:0000055!2.49e-09!180;CL:0000063!2.60e-07!578;CL:0000144!2.87e-07!625 | |||
|ontology_enrichment_celltype_v019=CL:0002620;2.49e-15;23!CL:0002595;3.34e-09;5!CL:0000077;2.83e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,2.49e-15,23;CL:0000057,9.23e-11,76;CL:0002595,7.58e-09,5;CL:0000077,1.90e-07,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;4.95e-10;5!DOID:450;4.95e-10;5!DOID:66;4.95e-10;5!DOID:423;4.95e-10;5!DOID:0080000;4.95e-10;5!DOID:11722;4.95e-10;5!DOID:0060084;6.80e-07;3!DOID:127;6.80e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:17,5.84e-10,5;DOID:450,5.84e-10,5;DOID:66,5.84e-10,5;DOID:423,5.84e-10,5;DOID:0080000,5.84e-10,5;DOID:11722,5.84e-10,5;DOID:0060084,6.18e-07,3;DOID:127,6.18e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0003102!5.81e-08!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0003834;3.34e-09;5!UBERON:0001533;3.34e-09;5!UBERON:0002097;1.46e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,4.75e-09,41;UBERON:0003834,7.58e-09,5;UBERON:0001533,7.58e-09,5;UBERON:0002199,1.65e-08,46;UBERON:0002416,1.65e-08,46 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0.491467873003018,0.697801167972428,0,0.263766978228454,0.123766352960047,0,0,0,0,0,0,0.612002073732759,0,0,0.136874425072884,0.125542639594803,0.305653622991805,0.246301768349837,0.0787107813136792,0,0,0.309632246632152,0,0,0,0.154934401160603,0.284338464974843,0,1.10799081706375,0.401088894940283,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0.512321413058201,0.236482229888585,0,0,0,0.188242339542605,0,0,0,0,0,0.989553900560148,0.398927315243264,0.426224750532694,0,0,0,0.251248665256743,1.0429658368404,0.434377689410233,0,0,0.316462387440884,0.211255286311942,0.637812899895131,1.04829322754188,0.112328631146495,0.150176892841506,0.32145117339416,0.285012743741249,0,0.182664153764634,0,0.546138611262131,1.77901850772711,0.853460445133014,0.400395987036012,1.14950487990897,0,0,1.1384259382189,0.587237189370939,0.382273228125229,0,0.560508562981536,0,0.196709770113833,0,0.205601498999509,0,0,0,0,0,0.294605907474837,0,0,0,0.260118695119756,0.328875809207352,0,0,0.14828656316206,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0.289648807765598,0,0,0,7.59022220007589,1.00267582127178,4.05570253090306,0.795285947051099,0.973269740605272,0.0945348171640679,0.221729397462564,0.351339142772504,0.130979075497713,0,0,0.324547393654683,0,0.26591592103773,0,0,0,0,0,0.347140501607594,0,0.419499436209906,0,0.208994966536811,0.258416759169329,0.71153252537342,1.00416183829401,0.402829317109147,0,0,0.367663080345869,1.62028389576352,0.446498641420399,0,0.337834441449967,0,0,0.183201743930407,0,0,0.436094052142534,1.49091585508596,1.13967460498122,4.10468460520978,1.43418310374407,0,0.560677600142307,0,0.49333509683432,0.622422070799533,0.404132016209064,0.326923806226917,0,0,0,0.312160076830321,0.570471821544449,1.04614076386261,0.352303495931295,0,0.421352420106746,0.816616685019573,0.737005903870608,0.413303124703062,0,0.494533858557114,1.82032272387605,0,0.168336113954066,0.250237039743928,3.04770527032601,2.19488810440419,1.83892677479412,1.20190447125277,0.340296549480063,8.07253360599879,1.49490172172997,2.11931901159562,9.00273288253207,5.87399416659102,2.31876486041066,1.8611685633159,3.37552664482532,0.68205903612839,9.84491719552046,1.38074847963449,0.323292113637624,9.58525899794859,4.93685281315437,6.44330250779853,0.57978255948989,0.818238361772504,2.29443676311203,0.243947412259191,0.132529768321485,0.116193942869518,0.310983165046111,0,0.36497735907583,0,0,1.38134921352481,0.928735856063958,0,0.946454400318751,0.674338760312407,0.723033089650446,1.54411561825352,0.653638332277218,0.949082476444386,1.07865046528132,1.56977172100277,1.15424147083917,0.738155454624648,0,0,0,0,0,0.590789906681404,0,0.491953754172454,0.343135620597051,0.109750285408626,0,0.201057944823262,0.0925884451585296,0.325808305310325,0,0,0.115930404975077,0.234817388471643,0.288732895522148,0.925971025153221,0,0,0,0,0.702012795417713,0.594524649154913,0,0.503946384596579,0.141775097242386,1.34337784054272,0.581267877027924,0,0.985326475791887,0.088048434013226,0.621984346622316,0.144119953416961,0.25248486685276,0.063497894292169,0,0,0,0.102827492703324,0.600686115687835,0,0.224262168690721,0,0.51336800074665,1.03417372606222,0,0,0.26593811658487,0,0,1.41849132023278,1.5985330740966,0.142977993658148,0,0,0.325736184293735,0,0.791951872933429,1.50719688529793,2.61460037580088,1.19967589418468,0,0,0,0.718874566474748,1.14861935834114,1.42636905040718,4.63300181336253,4.72595541865882,0.716243852959582,0.112085143993527,0.985153801009636,0.215627574859517,0.128343036279748,0,0,0,0,0,0,2.99161459204025,0,0,0,0.271265023699736,0.207970861530807,1.78428988797162,1.73472656537328,0.585707074963566,0,0,0,3.32112799267718,1.10621501125022,2.43274120510632,0.195801157462741,0,0,0.647142602455851,0.213455115606889,0,0,0,0.496215615637554,0.460385919864187,0,0.256278298511402,0,0.160853921143607,0,0.462629081407967,1.06537035187876,0.821271560138091,0.519254429183621,1.16210378459959,0.362578348774867,0.200506470303285,0,1.14814448164607,1.63882051206045,0.917870904715969,0,0.15403067420883,0.784349769176855,0,0.105551628892876,0,0.850468526382578,0,0,0,0.501689773854853,0.509752546090077,0,0.223874754722178,0,0,0,0,0,0.206082023295445,0,0,0,0,1.6068392984416,0,0.154048617114644,0.15350367472613,0.137836572484531,0.107420244868274,0.145016693914229,0.596586391912706,0.0890320356467374,0.165284915360978,0,1.02090169995667,0,0.464845549297286,2.83331112147576,2.0911118104818,0.308033580176089,0.532306030317022,1.73986598415015,0,0.858749320451947,0.744316738719335,0.316379424718726,0.38126038784765,1.02359116524534,0,0.95460974377781,0.78494864019923,0.359744915166629,0,0.824686816419805,0.404364963146632,1.58510321173008,0.421258456238981,0,4.38684281336312,1.05650146756755,2.8664981395677,0,0,1.10273068709225,2.65375590096488,3.06915619677634,0,0,0.202910376962704,0.30982349809975,0.563391205064483,0.430234056612155,0.491245205065606,0,0.354761064070598,2.74439925886963,1.31717957183961,0.37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| ||
|short_description=p5@HERC4 | |||
}} | }} |
Latest revision as of 22:26, 18 September 2015
Short description: | p5@HERC4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_HERC4_5end |
Coexpression cluster: | C2068_Fibroblast_Chondrocyte_leiomyoma_spindle_mesenchymal_basal_mesothelioma |
Association with transcript: | 70bp_to_ENST00000505760_5end |
EntrezGene: | HERC4 |
HGNC: | 24521 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 2.49e-15 | 23 |
fibroblast | 9.23e-11 | 76 |
smooth muscle cell of the subclavian artery | 7.58e-09 | 5 |
mesothelial cell | 1.90e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
skin of body | 4.75e-09 | 41 |
thoracic segment blood vessel | 7.58e-09 | 5 |
subclavian artery | 7.58e-09 | 5 |
integument | 1.65e-08 | 46 |
integumental system | 1.65e-08 | 46 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 5.84e-10 | 5 |
myotonic disease | 5.84e-10 | 5 |
muscle tissue disease | 5.84e-10 | 5 |
myopathy | 5.84e-10 | 5 |
muscular disease | 5.84e-10 | 5 |
myotonic dystrophy | 5.84e-10 | 5 |
cell type benign neoplasm | 6.18e-07 | 3 |
leiomyoma | 6.18e-07 | 3 |