FFCP PHASE1:Hg19::chr10:90749902..90749913,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=355 | |EntrezGene=355 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=11920 | |HGNC=11920 | ||
|TSSclassifier=strong | |||
|UniProt=P25445,Q5T9P3 | |UniProt=P25445,Q5T9P3 | ||
|association_with_transcript=-374bp_to_NM_000043,NM_152871,NM_152872,NR_028033,NR_028034,NR_028035,NR_028036,uc001kfr.2,uc001kfs.2,uc001kft.2,uc001kfw.2,uc010qnb.1,uc010qnc.1,uc010qnd.1,uc010qne.1_5end | |||
|cluster_id=chr10:90749902..90749913,+ | |||
|coexpression_cluster_id=C152 | |||
|description=CAGE_peak_14_at_FAS_5end | |||
|id=chr10:90749902..90749913,+ | |||
|ontology_enrichment_celltype=CL:0002591!4.57e-08!1;CL:0000319!8.84e-08!1;CL:0000342!1.15e-07!1;CL:0002565!1.15e-07!1;CL:0002574!2.63e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0002591;2.55e-98;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002591,2.55e-98,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3030!8.84e-08!1;DOID:5662!1.22e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:171;2.73e-11;10 | |||
|ontology_enrichment_disease_v019_2=DOID:171,2.73e-11,10 | |||
|ontology_enrichment_uberon=UBERON:0002171!4.89e-08!1;UBERON:0006518!4.89e-08!1;UBERON:0008949!4.89e-08!1;UBERON:0000101!4.89e-08!1;UBERON:0002167!4.89e-08!1;UBERON:0002426!5.22e-08!1;UBERON:0003831!5.22e-08!1;UBERON:0003898!5.22e-08!1;UBERON:0004830!5.22e-08!1;UBERON:0001774!5.22e-08!1;UBERON:0003830!5.22e-08!1;UBERON:0005175!5.22e-08!1;UBERON:0003897!5.22e-08!1;UBERON:0001103!5.22e-08!1;UBERON:0010084!5.22e-08!1;UBERON:0000996!5.58e-08!1;UBERON:0002506!1.15e-07!1;UBERON:0001769!1.15e-07!1;UBERON:0002372!3.17e-07!1;UBERON:0001961!3.17e-07!1;UBERON:0001744!3.17e-07!1;UBERON:0001735!3.17e-07!1;UBERON:0008814!4.77e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000078;4.52e-50;2!UBERON:0002012;4.52e-50;2!UBERON:0008886;4.52e-50;2!UBERON:0002346;5.56e-26;4!UBERON:0000923;5.56e-26;4!UBERON:0010316;5.56e-26;4!UBERON:0005291;5.56e-26;4!UBERON:0002050;4.21e-21;5!UBERON:0005423;4.21e-21;5!UBERON:0010313;3.02e-11;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000078,4.52e-50,2;UBERON:0007497,4.52e-50,2;UBERON:0003643,4.52e-50,2;UBERON:0003504,4.52e-50,2;UBERON:0003469,4.52e-50,2;UBERON:0003496,4.52e-50,2;UBERON:0002012,4.52e-50,2;UBERON:0008886,4.52e-50,2;UBERON:0007303,4.52e-50,2;UBERON:0002061,4.52e-50,2;UBERON:0005432,4.52e-50,2;UBERON:0004363,4.52e-50,2;UBERON:0004145,5.96e-34,3;UBERON:0003498,5.15e-21,5;UBERON:0005985,5.15e-21,5;UBERON:0010188,9.07e-18,6;UBERON:0002539,9.07e-18,6;UBERON:0003351,9.07e-18,6;UBERON:0008816,9.07e-18,6;UBERON:0000485,2.45e-12,9;UBERON:0010313,3.02e-11,10;UBERON:0002342,3.02e-11,10;UBERON:0001042,3.02e-11,10;UBERON:0009145,3.02e-11,10;UBERON:0005062,3.02e-11,10;UBERON:0006562,2.37e-10,11;UBERON:0009722,2.37e-10,11;UBERON:0007690,2.37e-10,11;UBERON:0008814,7.60e-07,18 | |||
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|short_description=p14@FAS | |||
}} | }} |
Latest revision as of 20:40, 19 September 2015
Short description: | p14@FAS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_FAS_5end |
Coexpression cluster: | C152_peripheral_neuroectodermal_neuroepithelioma_neuroblastoma_testicular_carcinoid_lung |
Association with transcript: | -374bp_to_NM_000043, NM_152871, NM_152872, NR_028033, NR_028034, NR_028035, NR_028036, uc001kfr.2, uc001kfs.2, uc001kft.2, uc001kfw.2, uc010qnb.1, uc010qnc.1, uc010qnd.1, uc010qne.1_5end |
EntrezGene: | FAS |
HGNC: | 11920 |
UniProt: | P25445Q5T9P3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 2.55e-98 | 1 |
Ontology term | p-value | n |
---|---|---|
mixed ectoderm/mesoderm/endoderm-derived structure | 4.52e-50 | 2 |
developing epithelial placode | 4.52e-50 | 2 |
respiratory system arterial blood vessel | 4.52e-50 | 2 |
respiratory system blood vessel | 4.52e-50 | 2 |
respiratory system artery | 4.52e-50 | 2 |
head blood vessel | 4.52e-50 | 2 |
pulmonary artery | 4.52e-50 | 2 |
pulmonary vascular system | 4.52e-50 | 2 |
pharyngeal vasculature | 4.52e-50 | 2 |
truncus arteriosus | 4.52e-50 | 2 |
aortic sac | 4.52e-50 | 2 |
pharyngeal arch artery | 4.52e-50 | 2 |
outflow tract | 5.96e-34 | 3 |
heart blood vessel | 5.15e-21 | 5 |
coronary vessel | 5.15e-21 | 5 |
protuberance | 9.07e-18 | 6 |
pharyngeal arch | 9.07e-18 | 6 |
pharyngeal epithelium | 9.07e-18 | 6 |
embryonic head | 9.07e-18 | 6 |
simple columnar epithelium | 2.45e-12 | 9 |
neural crest-derived structure | 3.02e-11 | 10 |
neural crest | 3.02e-11 | 10 |
chordate pharynx | 3.02e-11 | 10 |
pharyngeal region of foregut | 3.02e-11 | 10 |
neural fold | 3.02e-11 | 10 |
pharynx | 2.37e-10 | 11 |
entire pharyngeal arch endoderm | 2.37e-10 | 11 |
early pharyngeal endoderm | 2.37e-10 | 11 |
pharyngeal arch system | 7.60e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 2.73e-11 | 10 |