FFCP PHASE1:Hg19::chr11:21774394..21774400,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:21774394..21774400,- to FFCP PHASE1:Hg19::chr11:21774394..21774400,-: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:21774394..21774400,- | |||
|coexpression_cluster_id=C321 | |||
|description=CAGE_peak_at_chr11:21774394..21774400,- | |||
|id=chr11:21774394..21774400,- | |||
|ontology_enrichment_celltype=CL:0000084!7.38e-09!25;CL:0000827!7.38e-09!25;CL:0000838!3.75e-07!52;CL:0000542!6.43e-07!53;CL:0000051!6.43e-07!53;CL:0000624!9.39e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000123;4.45e-20;2!CL:0000242;4.45e-20;2!CL:0000319;4.80e-11;1!CL:0000312;1.37e-08;5!CL:0000240;2.69e-07;6!CL:0000311;2.69e-07;6!CL:0000079;2.69e-07;6!CL:0000237;2.69e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,5.40e-20,2;CL:0000319,5.05e-11,1;CL:0000312,1.48e-08,5;CL:0000240,2.87e-07,6;CL:0000311,2.87e-07,6;CL:0000079,2.87e-07,6;CL:0000237,2.87e-07,6;CL:0000036,2.87e-07,6;CL:0000357,2.87e-07,6;CL:0000114,2.87e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000357;2.69e-07;6!CL:0000114;2.69e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3030;4.80e-11;1!DOID:0050619;1.15e-10;1!DOID:1357;1.15e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,5.05e-11,1;DOID:0050619,9.97e-11,1;DOID:1357,9.97e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0002020!8.65e-12!34;UBERON:0003528!8.65e-12!34;UBERON:0002791!3.94e-11!33;UBERON:0001893!1.17e-10!34;UBERON:0007023!1.42e-09!115;UBERON:0001869!3.31e-09!32;UBERON:0001049!5.89e-09!57;UBERON:0005068!5.89e-09!57;UBERON:0006241!5.89e-09!57;UBERON:0007135!5.89e-09!57;UBERON:0002780!5.10e-08!41;UBERON:0001890!5.10e-08!41;UBERON:0006240!5.10e-08!41;UBERON:0003080!1.02e-07!42;UBERON:0002616!1.60e-07!59;UBERON:0002619!3.45e-07!22;UBERON:0000956!5.09e-07!25;UBERON:0000203!5.09e-07!25;UBERON:0002308!6.48e-07!9;UBERON:0000125!6.48e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.40e-19;2!UBERON:0005058;1.40e-19;2!UBERON:0009113;1.40e-19;2!UBERON:0001764;1.15e-10;1!UBERON:0001825;1.15e-10;1!UBERON:0004177;2.16e-08;5!UBERON:0005057;2.16e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,9.97e-11,1;UBERON:0001825,9.97e-11,1;UBERON:0002370,2.99e-10,4;UBERON:0005058,2.99e-10,4;UBERON:0009113,2.99e-10,4;UBERON:0003295,2.99e-10,4;UBERON:0005562,2.99e-10,4;UBERON:0003351,4.05e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0.293600439334847,0,0,0,0,0,0.515151135268373,0,0,0,0,0,0.619412741790207,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0.622822248995575,0,0,0,0,0.736555271975129,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0.263384084775077,0.393419540227666,0.393010762749165,0.411202997999018,0.334372990781356,0.651844533267181,0,0,0.111410456885174,0.883817722424512,0,0,0,0.520237390239513,0,0.276350017785848,0.289803085735052,0.14828656316206,0,0,0,0,0,0,0,0.651083453856419,0,0.150575119077773,0,0,0,0,0.201606743224732,0.534880391567015,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.523916301990851,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205654985406647,0,0,0,0,0,0,0,0,0,0,0,1.41849132023278,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591092280605782,0.431255149719035,0.256686072559497,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86091223510599,0.215714200818617,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0.366277859273374,0.41254749960294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,0.569647187174163,0,0,0,0.540031437238115,0,0.106824071127473,0,3.18552280775341,0,0,0.0711418433484141,2.71024663638998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,4.17609260842864,0,0,0,0,0,0,0,9.2498008950307,0,0,0,0,0,0.281338832821026,0,0,0,0,0.276283915531148,0,0.102268682502155,0,0,0,0,0,0.0986434056369336,0,0,0,0.185536196323703,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0.723578631752448,0,0.221158519862449,0,0.219385397153973,0,0,0.0769502585037971,0.227884111694002,0.23056390438806,0,3.69401064534827,0,0,0,1.02193298195737,0,0,0.902382642468723,0.392125068635479,0.503464760927528,0.189753732724185,0,0,0,0,0,0,0,0,0,0,0,0.202203398942031,0.802577647298789,0,0,0,0,0,0,0,0,2.1045278718029,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0.146178634172371,0.0821154570532092,0.0969890164884194,0,0,0,0,0.189932387867636,0.391102765469606,3.68730573157055,0,0.19980960958213,0,0,0.171594997861965,0.14405479798815,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236349546921671,0.576911008668165,0.202210631562555,0,0,0.795229689809303,0.272406812223151,0,0,0,0,0,0.242998226632099,0,0.0788057072991982,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0.246277562248017,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0.213574825135389,0,0,0,0.395223263795889,0,0,0,0,0,0,1.41348686625211,0,0.488105059607853,0.250381861413,0,0.110929051536852,0.372578417648301,0,0,0,0,0,4.21501415226193,1.1593682288866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,3.68659363130579,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256916900385838,0,0.159633859057151,0,0,0.0691572524642179,0,0,0,0,0,0,0.381382095467167,0,0,0,0.80682027481408,0,0,0,0.147856086217045,0,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0.514464028312255,0,0,0,0,0,0.314231179832004,0.840816489941367,0,0.863710364874486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.955538938977433,0.111855431797792,0,0,0,0,0,0,0,0,0.237840181555137,0,0,0.603851374266694,0,0,0,0,0,0.588925401344836,0,0,0,0.0939839179798536,0.128915775947154,0,0,0,0,0,0,0.143339583151451,33.289799622762,0.475940431336403,0,0,0,0,0,0,0,5.44803554349179,0.101988829741982,0,0,0.250707539292375,1.06090177505535,1.87574891109325,0,0,0,0,1.35636710655613,1.24149428591716,0.112131862580613,0,0,0.217716747896961,0,0.336760265072938,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0.293600439334847,0,0,0,0,0,0.515151135268373,0,0,0,0,0,0.619412741790207,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0.622822248995575,0,0,0,0,0.736555271975129,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0.263384084775077,0.393419540227666,0.393010762749165,0.411202997999018,0.334372990781356,0.651844533267181,0,0,0.111410456885174,0.883817722424512,0,0,0,0.520237390239513,0,0.276350017785848,0.289803085735052,0.14828656316206,0,0,0,0,0,0,0,0.651083453856419,0,0.150575119077773,0,0,0,0,0.201606743224732,0.534880391567015,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.523916301990851,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205654985406647,0,0,0,0,0,0,0,0,0,0,0,1.41849132023278,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591092280605782,0.431255149719035,0.256686072559497,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86091223510599,0.215714200818617,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0.366277859273374,0.41254749960294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,0.569647187174163,0,0,0,0.540031437238115,0,0.106824071127473,0,3.18552280775341,0,0,0.0711418433484141,2.71024663638998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,4.17609260842864,0,0,0,0,0,0,0,9.2498008950307,0,0,0,0,0,0.281338832821026,0,0,0,0,0.276283915531148,0,0.102268682502155,0,0,0,0,0,0.0986434056369336,0,0,0,0.185536196323703,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0.723578631752448,0,0.221158519862449,0,0.219385397153973,0,0,0.0769502585037971,0.227884111694002,0.23056390438806,0,3.69401064534827,0,0,0,1.02193298195737,0,0,0.902382642468723,0.392125068635479,0.503464760927528,0.189753732724185,0,0,0,0,0,0,0,0,0,0,0,0.202203398942031,0.802577647298789,0,0,0,0,0,0,0,0,2.1045278718029,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0.146178634172371,0.0821154570532092,0.0969890164884194,0,0,0,0,0.189932387867636,0.391102765469606,3.68730573157055,0,0.19980960958213,0,0,0.171594997861965,0.14405479798815,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236349546921671,0.576911008668165,0.202210631562555,0,0,0.795229689809303,0.272406812223151,0,0,0,0,0,0.242998226632099,0,0.0788057072991982,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0.246277562248017,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0.213574825135389,0,0,0,0.395223263795889,0,0,0,0,0,0,1.41348686625211,0,0.488105059607853,0.250381861413,0,0.110929051536852,0.372578417648301,0,0,0,0,0,4.21501415226193,1.1593682288866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,3.68659363130579,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256916900385838,0,0.159633859057151,0,0,0.0691572524642179,0,0,0,0,0,0,0.381382095467167,0,0,0,0.80682027481408,0,0,0,0.147856086217045,0,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0.514464028312255,0,0,0,0,0,0.314231179832004,0.840816489941367,0,0.863710364874486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.955538938977433,0.111855431797792,0,0,0,0,0,0,0,0,0.237840181555137,0,0,0.603851374266694,0,0,0,0,0,0.588925401344836,0,0,0,0.0939839179798536,0.128915775947154,0,0,0,0,0,0,0.143339583151451,33.289799622762,0.475940431336403,0,0,0,0,0,0,0,5.44803554349179,0.101988829741982,0,0,0.250707539292375,1.06090177505535,1.87574891109325,0,0,0,0,1.35636710655613,1.24149428591716,0.112131862580613,0,0,0.217716747896961,0,0.336760265072938,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr11:21774394..21774400,- | |||
}} | }} |
Latest revision as of 21:05, 23 July 2015
Short description: | p@chr11:21774394..21774400, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:21774394..21774400, - |
Coexpression cluster: | C321_synovial_anaplastic_maxillary_glassy_keratoacanthoma_rhabdomyosarcoma_small |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 5.40e-20 | 2 |
mucus secreting cell | 5.05e-11 | 1 |
keratinocyte | 1.48e-08 | 5 |
stratified squamous epithelial cell | 2.87e-07 | 6 |
keratin accumulating cell | 2.87e-07 | 6 |
stratified epithelial cell | 2.87e-07 | 6 |
keratinizing barrier epithelial cell | 2.87e-07 | 6 |
epithelial fate stem cell | 2.87e-07 | 6 |
stratified epithelial stem cell | 2.87e-07 | 6 |
surface ectodermal cell | 2.87e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 9.97e-11 | 1 |
paranasal sinus | 9.97e-11 | 1 |
thymus | 2.99e-10 | 4 |
hemolymphoid system gland | 2.99e-10 | 4 |
thymic region | 2.99e-10 | 4 |
pharyngeal gland | 2.99e-10 | 4 |
thymus primordium | 2.99e-10 | 4 |
pharyngeal epithelium | 4.05e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 5.05e-11 | 1 |
paranasal sinus cancer | 9.97e-11 | 1 |
maxillary sinus cancer | 9.97e-11 | 1 |