FFCP PHASE1:Hg19::chr11:279384..279393,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=171389 | |EntrezGene=171389 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22944 | |HGNC=22944 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=325bp_to_ENST00000527946_5end | |||
|cluster_id=chr11:279384..279393,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_3_at_NLRP6_5end | |||
|id=chr11:279384..279393,+ | |||
|ontology_enrichment_celltype=CL:0000738!3.63e-20!140;CL:0000094!6.46e-19!8;CL:0000037!1.01e-15!172;CL:0000566!1.01e-15!172;CL:0002393!1.89e-15!9;CL:0002397!1.89e-15!9;CL:0002087!7.08e-15!119;CL:0002032!1.31e-14!165;CL:0000837!1.31e-14!165;CL:0000988!2.52e-14!182;CL:0000766!2.77e-14!76;CL:0002057!1.42e-13!42;CL:0000081!2.00e-13!11;CL:0000860!2.07e-12!45;CL:0002031!9.21e-12!124;CL:0000775!1.10e-10!3;CL:0000875!5.41e-10!3;CL:0002396!5.41e-10!3;CL:0000791!5.77e-09!18;CL:0000789!5.77e-09!18;CL:0002420!5.77e-09!18;CL:0002419!5.77e-09!18;CL:0000790!5.77e-09!18;CL:0000763!7.50e-09!112;CL:0000049!7.50e-09!112;CL:0000771!1.07e-07!2;CL:0002194!1.27e-07!63;CL:0000576!1.27e-07!63;CL:0000040!1.27e-07!63;CL:0000559!1.27e-07!63;CL:0002009!2.77e-07!65 | |||
|ontology_enrichment_celltype_v019=CL:0000094;1.93e-37;8!CL:0000775;1.37e-36;3!CL:0000081;2.94e-27;11!CL:0000771;4.66e-25;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,1.93e-37,8;CL:0000775,1.45e-36,3;CL:0000081,2.94e-27,11;CL:0000771,4.38e-25,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!3.84e-19!15;UBERON:0000179!3.84e-19!15;UBERON:0000463!3.84e-19!15;UBERON:0002193!1.07e-16!112;UBERON:0002390!2.92e-16!102;UBERON:0003061!2.92e-16!102;UBERON:0002405!3.37e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.47e-61;15!UBERON:0000179;2.47e-61;15!UBERON:0000463;2.47e-61;15!UBERON:0002390;6.74e-26;32!UBERON:0002193;6.41e-18;42!UBERON:0000029;8.64e-13;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.66e-61,15;UBERON:0000179,2.66e-61,15;UBERON:0000463,2.66e-61,15;UBERON:0000029,7.68e-13,1;UBERON:0002193,2.06e-11,108;UBERON:0002390,1.92e-10,98;UBERON:0003061,1.92e-10,98;UBERON:0004535,1.45e-07,109;UBERON:0001009,2.48e-07,112;UBERON:0007023,3.44e-07,114 | |||
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| ||
|short_description=p3@NLRP6 | |||
}} | }} |
Latest revision as of 12:42, 17 September 2015
Short description: | p3@NLRP6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_NLRP6_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 325bp_to_ENST00000527946_5end |
EntrezGene: | NLRP6 |
HGNC: | 22944 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 1.93e-37 | 8 |
neutrophil | 1.45e-36 | 3 |
blood cell | 2.94e-27 | 11 |
eosinophil | 4.38e-25 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 2.66e-61 | 15 |
haemolymphatic fluid | 2.66e-61 | 15 |
organism substance | 2.66e-61 | 15 |
lymph node | 7.68e-13 | 1 |
hemolymphoid system | 2.06e-11 | 108 |
hematopoietic system | 1.92e-10 | 98 |
blood island | 1.92e-10 | 98 |
cardiovascular system | 1.45e-07 | 109 |
circulatory system | 2.48e-07 | 112 |
adult organism | 3.44e-07 | 114 |