FFCP PHASE1:Hg19::chr11:3838082..3838123,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=27315 | |EntrezGene=27315 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=17893 | |HGNC=17893 | ||
|TSSclassifier=strong | |||
|UniProt=F5H2L9 | |UniProt=F5H2L9 | ||
|association_with_transcript=100bp_to_ENST00000502872,ENST00000507938_5end | |||
|cluster_id=chr11:3838082..3838123,+ | |||
|coexpression_cluster_id=C39 | |||
|description=CAGE_peak_9_at_PGAP2_5end | |||
|id=chr11:3838082..3838123,+ | |||
|ontology_enrichment_celltype=CL:0000313!8.54e-08!1 | |||
|ontology_enrichment_celltype_v019=CL:0000313;2.70e-40;1!CL:0000159;6.30e-21;2!CL:0002149;5.92e-08;6!CL:0002255;5.92e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,3.30e-40,1;CL:0000159,6.96e-21,2;CL:0002149,5.92e-08,6;CL:0002255,5.92e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0007297;3.11e-21;2 | |||
|ontology_enrichment_disease=DOID:178!8.00e-08!1;DOID:326!8.00e-08!1;DOID:3978!8.00e-08!1;DOID:3394!8.00e-08!1;DOID:5844!8.00e-08!1;DOID:2152!8.54e-08!1;DOID:5093!7.06e-07!4;DOID:1612!7.06e-07!4 | |||
|ontology_enrichment_disease_v019=DOID:178;2.70e-40;1!DOID:326;2.70e-40;1!DOID:3978;2.70e-40;1!DOID:3394;2.70e-40;1!DOID:2152;2.70e-40;1!DOID:5844;2.70e-40;1!DOID:114;6.30e-21;2!DOID:1287;3.60e-11;4!DOID:3001;5.92e-08;6!DOID:299;2.39e-07;25!DOID:120;7.13e-07;27 | |||
|ontology_enrichment_disease_v019_2=DOID:178,2.21e-40,1;DOID:326,2.21e-40,1;DOID:3978,2.21e-40,1;DOID:3394,2.21e-40,1;DOID:5844,2.21e-40,1;DOID:2152,3.30e-40,1;DOID:114,5.70e-21,2;DOID:1287,3.42e-11,4;DOID:3001,5.92e-08,6;DOID:299,2.43e-07,25;DOID:120,7.24e-07,27 | |||
|ontology_enrichment_uberon=UBERON:0006947!4.20e-20!3;UBERON:0004054!4.20e-20!3;UBERON:0005904!3.25e-15!4;UBERON:0003135!3.62e-14!11;UBERON:0004175!1.57e-11!25;UBERON:0003133!2.90e-11!48;UBERON:0005156!7.78e-09!59;UBERON:0000990!7.78e-09!59;UBERON:0001301!6.59e-08!1;UBERON:0001000!7.50e-08!1;UBERON:0005352!7.50e-08!1;UBERON:0004911!8.54e-08!1;UBERON:0000998!9.10e-08!1;UBERON:0006868!9.10e-08!1;UBERON:0006122!1.03e-07!1;UBERON:0000473!1.80e-07!8;UBERON:0006834!3.40e-07!1;UBERON:0002372!4.61e-07!1;UBERON:0001961!4.61e-07!1;UBERON:0001744!4.61e-07!1;UBERON:0001735!4.61e-07!1;UBERON:0003101!5.89e-07!22;UBERON:0000079!5.89e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;1.68e-53;3!UBERON:0004054;1.68e-53;3!UBERON:0001301;6.62e-41;1!UBERON:0001000;1.48e-40;1!UBERON:0005352;1.48e-40;1!UBERON:0005904;1.81e-40;4!UBERON:0004911;2.70e-40;1!UBERON:0004909;6.30e-21;2!UBERON:0004175;7.83e-18;21!UBERON:0000058;6.39e-17;10!UBERON:0003135;1.74e-15;11!UBERON:0003133;1.43e-11;44!UBERON:0003101;2.93e-08;22!UBERON:0000079;2.93e-08;22!UBERON:0005156;1.05e-07;59!UBERON:0000990;1.05e-07;59 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,1.68e-53,3;UBERON:0004054,1.68e-53,3;UBERON:0001301,6.62e-41,1;UBERON:0001000,1.48e-40,1;UBERON:0005352,1.48e-40,1;UBERON:0005904,1.81e-40,4;UBERON:0004911,3.30e-40,1;UBERON:0004909,6.96e-21,2;UBERON:0003135,1.74e-15,11;UBERON:0004175,3.99e-15,25;UBERON:0003133,6.82e-14,48;UBERON:0005156,1.96e-11,59;UBERON:0000990,1.96e-11,59;UBERON:0000058,2.08e-09,19;UBERON:0003101,2.93e-08,22;UBERON:0000079,2.93e-08,22 | |||
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|short_description=p9@PGAP2 | |||
}} | }} |
Latest revision as of 22:17, 17 September 2015
Short description: | p9@PGAP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_PGAP2_5end |
Coexpression cluster: | C39_epididymis_ductus_seminal_testis_acute_thyroid_CD133 |
Association with transcript: | 100bp_to_ENST00000502872, ENST00000507938_5end |
EntrezGene: | PGAP2 |
HGNC: | 17893 |
UniProt: | F5H2L9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 3.30e-40 | 1 |
seromucus secreting cell | 6.96e-21 | 2 |
epithelial cell of uterus | 5.92e-08 | 6 |
stromal cell of endometrium | 5.92e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 1.68e-53 | 3 |
internal male genitalia | 1.68e-53 | 3 |
epididymis | 6.62e-41 | 1 |
vas deferens | 1.48e-40 | 1 |
spermatic cord | 1.48e-40 | 1 |
duct of male reproductive system | 1.81e-40 | 4 |
epithelium of female gonad | 3.30e-40 | 1 |
epithelium of gonad | 6.96e-21 | 2 |
male reproductive organ | 1.74e-15 | 11 |
internal genitalia | 3.99e-15 | 25 |
reproductive organ | 6.82e-14 | 48 |
reproductive structure | 1.96e-11 | 59 |
reproductive system | 1.96e-11 | 59 |
duct | 2.08e-09 | 19 |
male organism | 2.93e-08 | 22 |
male reproductive system | 2.93e-08 | 22 |
Ontology term | p-value | n |
---|---|---|
vascular disease | 2.21e-40 | 1 |
ischemia | 2.21e-40 | 1 |
extrinsic cardiomyopathy | 2.21e-40 | 1 |
myocardial ischemia | 2.21e-40 | 1 |
myocardial infarction | 2.21e-40 | 1 |
ovary epithelial cancer | 3.30e-40 | 1 |
heart disease | 5.70e-21 | 2 |
cardiovascular system disease | 3.42e-11 | 4 |
female reproductive endometrioid cancer | 5.92e-08 | 6 |
adenocarcinoma | 2.43e-07 | 25 |
female reproductive organ cancer | 7.24e-07 | 27 |