FFCP PHASE1:Hg19::chr11:86518976..86519000,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:86518976..86519000,+ to FFCP PHASE1:Hg19::chr11:86518976..86519000,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=11098 | |EntrezGene=11098 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=14370 | |HGNC=14370 | ||
|TSSclassifier=strong | |||
|UniProt=O95084 | |UniProt=O95084 | ||
|association_with_transcript=290bp_to_CR456824_5end | |||
|cluster_id=chr11:86518976..86519000,+ | |||
|coexpression_cluster_id=C1006 | |||
|description=CAGE_peak_4_at_PRSS23_5end | |||
|id=chr11:86518976..86519000,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.13e-15!180;CL:0000222!2.70e-14!119;CL:0000066!1.82e-13!254;CL:0000220!3.66e-12!246;CL:0002321!6.13e-12!248;CL:0000057!4.59e-11!75;CL:0000548!3.91e-10!679;CL:0000004!3.91e-10!679;CL:0000255!3.91e-10!679;CL:0000012!1.26e-09!682;CL:0000213!1.78e-08!57;CL:0000215!1.78e-08!57 | |||
|ontology_enrichment_celltype_v019=CL:1000413;5.87e-09;9!CL:0002139;7.63e-08;24!CL:0000115;3.23e-07;36!CL:0000071;3.94e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.02e-11,121;CL:0000213,1.37e-10,58;CL:0000215,1.37e-10,58;CL:1000413,7.03e-09,9;CL:0002139,1.18e-07,24;CL:0002078,2.14e-07,45;CL:0000057,2.17e-07,76;CL:0000115,2.36e-07,36;CL:0000071,5.18e-07,18;CL:0002546,5.18e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002546;3.94e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!4.75e-14!79;UBERON:0007798!4.75e-14!79;UBERON:0004872!3.27e-12!84;UBERON:0003914!2.04e-11!118;UBERON:0001981!4.76e-11!60;UBERON:0007500!4.76e-11!60;UBERON:0004537!4.76e-11!60;UBERON:0006965!4.76e-11!60;UBERON:0002100!6.74e-11!216;UBERON:0000055!1.15e-10!69;UBERON:0004535!1.90e-10!110;UBERON:0000490!6.49e-10!138;UBERON:0001009!7.89e-10!113;UBERON:0001637!1.06e-09!42;UBERON:0003509!1.06e-09!42;UBERON:0004572!1.06e-09!42;UBERON:0000477!1.40e-08!286;UBERON:0005256!7.75e-08!143;UBERON:0003104!1.27e-07!238;UBERON:0009142!1.27e-07!238;UBERON:0000468!1.81e-07!659;UBERON:0000467!6.35e-07!625;UBERON:0000475!7.47e-07!365;UBERON:0000480!8.66e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.81e-12;42!UBERON:0003509;1.81e-12;42!UBERON:0004572;1.81e-12;42!UBERON:0001737;2.79e-09;9!UBERON:0001557;2.79e-09;9!UBERON:0004457;4.00e-09;9!UBERON:0000042;4.00e-09;9!UBERON:0003915;5.87e-09;9!UBERON:0004700;5.87e-09;9!UBERON:0001917;5.87e-09;9!UBERON:0003688;6.23e-09;6!UBERON:0002358;6.23e-09;6!UBERON:0003684;6.23e-09;6!UBERON:0001178;6.23e-09;6!UBERON:0004573;2.22e-08;33!UBERON:0004571;2.22e-08;33!UBERON:0007500;6.80e-08;56!UBERON:0001981;6.80e-08;56!UBERON:0004537;6.80e-08;56!UBERON:0003513;2.96e-07;7!UBERON:0006914;3.19e-07;25!UBERON:0002049;3.53e-07;75!UBERON:0007798;3.53e-07;75!UBERON:0004638;3.94e-07;18!UBERON:0001986;3.94e-07;18!UBERON:0004852;3.94e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,2.07e-17,78;UBERON:0007798,2.07e-17,78;UBERON:0001637,5.12e-14,42;UBERON:0003509,5.12e-14,42;UBERON:0004572,5.12e-14,42;UBERON:0007500,1.02e-13,59;UBERON:0001981,1.02e-13,59;UBERON:0004537,1.02e-13,59;UBERON:0006965,1.02e-13,59;UBERON:0004872,1.30e-13,83;UBERON:0004535,1.38e-13,109;UBERON:0000055,1.85e-13,68;UBERON:0001009,7.27e-13,112;UBERON:0001737,1.01e-09,9;UBERON:0003914,1.66e-09,117;UBERON:0003688,4.70e-09,6;UBERON:0002358,4.70e-09,6;UBERON:0003684,4.70e-09,6;UBERON:0001178,4.70e-09,6;UBERON:0004573,6.56e-09,33;UBERON:0004571,6.56e-09,33;UBERON:0003915,7.03e-09,9;UBERON:0004700,7.03e-09,9;UBERON:0001917,7.03e-09,9;UBERON:0003513,2.44e-07,7;UBERON:0004638,5.18e-07,18;UBERON:0001986,5.18e-07,18;UBERON:0004852,5.18e-07,18;UBERON:0006914,5.25e-07,25 | |||
|phase1_expression=1.81678379270557,5.56661362116556,2.67813367782345,6.00439790118782,3.12872766099101,20.0637860543085,0,1.26343974685366,0.522371256399677,0.491467873003018,1.39560233594486,0.655324116390517,1.31883489114227,0.74259811776028,1.65698687863958,0,1.80808358407193,1.46062018077475,0.975865597581014,0.246242116153576,1.22400414746552,0.313454721478088,0,0.547497700291537,1.38096903554283,0,0,0,0,0,0,0.919421224478927,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511450247374121,3.2529523714611,1.00267582127178,4.63508860674636,0.795285947051099,2.91980922181582,1.32348744029695,3.32594096193846,2.72287835648691,0.130979075497713,0,0.370784442784429,0,0,0,0,0,0,1.19257444420023,0,2.42998351125316,2.82653970962005,3.35599548967925,3.02629846134074,1.04497483268405,2.06733407335463,0,0.66944122552934,2.41697590265488,0.760272105718513,3.41686880567437,1.83831540172934,8.1014194788176,0.446498641420399,0,0.225222960966644,0,0.949265659568129,1.09921046358244,0,0,1.3082821564276,2.98183171017191,1.51956613997496,0.397227542439656,3.72887606973458,2.12801029319014,1.68203280042692,2.1349799145941,4.44001587150888,0.311211035399766,0.67355336034844,1.63461903113459,1.05950199351452,0.576175924479999,0,0,0,0.298897361103602,0.469737994575059,0.161872944368132,0.140450806702248,0.408308342509787,0.982674538494144,0.413303124703062,0,1.23633464639278,0,0,0.168336113954066,1.12606667884768,0.277064115484183,1.75591048352335,4.90380473278431,0.300476117813194,1.02088964844019,1.07633781413317,2.34913127700424,0.423863802319124,0.300091096084402,0.309157587715317,0.257640540045629,1.67505170698431,0.506328996723799,0.584622030967192,0,0.552299391853796,0.646584227275248,1.42003837006646,0.705264687593482,0.67824236924195,0.193260853163297,0.545492241181669,0,0,0.132529768321485,0,0,0,0,0,13.5080597020506,0,3.25057549622385,0.721879481669586,1.41968160047813,2.19160097101532,1.92808823906786,1.98529150918309,1.74303555273925,1.18635309555548,1.21348177344148,1.56977172100277,1.15424147083917,1.4763109092493,2.80483547606892,1.2347220339942,1.47008711385542,0,0,0,0,0.122988438543114,3.77449182656756,0.548751427043128,0,0,0.740707561268237,0.325808305310325,0,2.88662684050547,0.927443239800615,0.234817388471643,1.15493158208859,1.38895653772983,0.380508304469197,0.790204397959275,0.858486162094873,0,0,0,1.87467667973554,2.68771405118175,0.283550194484773,0.179117045405697,0.581267877027924,0.766765358330422,0,0,0,0,0,0,0,0,0,0.308482478109971,0.600686115687835,0,1.00917975910825,0,1.466765716419,0.646358578788889,0,0,2.12750493267896,0,0,0,0,0.428933980974443,0,0,0,0.355391948742546,0,1.20575750823834,0.871533458600294,1.69954085009497,0,0,0,0.958499421966331,0,0,1.30303176000821,1.84928690295345,0.179060963239896,0,0.197030760201927,0.431255149719035,0.128343036279748,0,0,0,0.167516265334349,0.637938751653163,0,0,0,0.36807447515742,0.500170521059677,0.271265023699736,2.28767947683888,12.3116002270042,4.57337003598411,1.87426263988341,2.10662269809403,13.6444502433591,1.03473071292505,0.664225598535437,0.737476674166813,0.260650843404249,0.587403472388222,0.343143423810856,0,0,0.106727557803444,0.303127571446259,3.32870879020994,1.20956117331872,1.48864684691266,1.07423381301644,3.36792113319688,3.58789617915963,1.53512174720011,4.18220194973379,14.8418066444991,0.154209693802656,0.177561725313127,0,0.519254429183621,0.232420756919918,0.362578348774867,2.00506470303285,0.368323955743585,0.459257792658427,0.546273504020151,0.393373244878272,0,0.385076685522074,0.784349769176855,0,0.422206515571503,0,2.04112446331819,0.647747748306418,0,0.541892875087706,2.00675909541941,0.509752546090077,0.831076008928724,0.447749509444357,0,0,0.769350375349168,0.984043937099117,0,0.103041011647722,0.183138929636687,0.082509499920588,0,0,0,0.096670718292122,0.924291702687866,0.614014698904518,0.275673144969061,0.107420244868274,0.435050081742686,0.340906509664404,0.0890320356467374,0.991709492165869,0.768760269460425,0.382838137483752,0.30347334256665,0,0.94443704049192,0,0,0,0,1.29726953372744,2.14687330112987,1.48863347743867,0.316379424718726,1.71567174531442,0,0,0.636406495851874,0.78494864019923,0.539617372749944,0.823611089208164,0.235624804691373,0,1.58510321173008,1.26377536871694,0.975267478179181,3.1682753652067,3.16950440270266,0.409499734223957,0.565621727814851,1.13008116620243,0,2.65375590096488,4.38450885253763,1.15755106853338,0,1.21746226177622,1.8589409885985,1.12678241012897,0.143411352204052,0.196498082026242,0.7133421029625,0.354761064070598,1.26664581178598,1.31717957183961,0,0.349934720244983,0,0.670302275535787,0,0.188287601553558,0.86101074534246,3.36942951335251,0.443430153536676,0.229723400206959,0.507447609232169,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0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| ||
|short_description=p4@PRSS23 | |||
}} | }} |
Latest revision as of 22:48, 24 September 2015
Short description: | p4@PRSS23 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PRSS23_5end |
Coexpression cluster: | C1006_Adipocyte_Olfactory_Preadipocyte_tenocyte_Hair_meningioma_Osteoblast |
Association with transcript: | 290bp_to_CR456824_5end |
EntrezGene: | PRSS23 |
HGNC: | 14370 |
UniProt: | O95084 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.02e-11 | 121 |
lining cell | 1.37e-10 | 58 |
barrier cell | 1.37e-10 | 58 |
endothelial cell of artery | 7.03e-09 | 9 |
endothelial cell of vascular tree | 1.18e-07 | 24 |
meso-epithelial cell | 2.14e-07 | 45 |
fibroblast | 2.17e-07 | 76 |
endothelial cell | 2.36e-07 | 36 |
blood vessel endothelial cell | 5.18e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 5.18e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
vasculature | 2.07e-17 | 78 |
vascular system | 2.07e-17 | 78 |
artery | 5.12e-14 | 42 |
arterial blood vessel | 5.12e-14 | 42 |
arterial system | 5.12e-14 | 42 |
epithelial tube open at both ends | 1.02e-13 | 59 |
blood vessel | 1.02e-13 | 59 |
blood vasculature | 1.02e-13 | 59 |
vascular cord | 1.02e-13 | 59 |
splanchnic layer of lateral plate mesoderm | 1.30e-13 | 83 |
cardiovascular system | 1.38e-13 | 109 |
vessel | 1.85e-13 | 68 |
circulatory system | 7.27e-13 | 112 |
larynx | 1.01e-09 | 9 |
epithelial tube | 1.66e-09 | 117 |
omentum | 4.70e-09 | 6 |
peritoneum | 4.70e-09 | 6 |
abdominal cavity | 4.70e-09 | 6 |
visceral peritoneum | 4.70e-09 | 6 |
systemic artery | 6.56e-09 | 33 |
systemic arterial system | 6.56e-09 | 33 |
endothelial tube | 7.03e-09 | 9 |
arterial system endothelium | 7.03e-09 | 9 |
endothelium of artery | 7.03e-09 | 9 |
trunk blood vessel | 2.44e-07 | 7 |
blood vessel endothelium | 5.18e-07 | 18 |
endothelium | 5.18e-07 | 18 |
cardiovascular system endothelium | 5.18e-07 | 18 |
squamous epithelium | 5.25e-07 | 25 |