FFCP PHASE1:Hg19::chr12:56360550..56360566,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:56360550..56360566,+ to FFCP PHASE1:Hg19::chr12:56360550..56360566,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1017 | |EntrezGene=1017 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1771 | |HGNC=1771 | ||
|TSSclassifier=strong | |||
|UniProt=P24941 | |UniProt=P24941 | ||
|association_with_transcript=0bp_to_ENST00000266970,ENST00000556464,NM_001798,NM_052827,uc001sit.3,uc001siu.3,uc010spy.1_5end | |||
|cluster_id=chr12:56360550..56360566,+ | |||
|description=CAGE_peak_3_at_CDK2_5end | |||
|id=chr12:56360550..56360566,+ | |||
|ontology_enrichment_celltype=CL:0000066!3.14e-13!254;CL:0000548!6.25e-08!679;CL:0000004!6.25e-08!679;CL:0000255!6.25e-08!679;CL:0000012!1.94e-07!682 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,8.69e-13,253 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.32e-09;29 | |||
|ontology_enrichment_disease=DOID:14566!3.93e-25!239;DOID:162!6.45e-25!235;DOID:0050687!3.59e-19!143;DOID:305!4.57e-15!106;DOID:0050686!4.10e-13!137 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,3.05e-25,239;DOID:162,3.28e-25,235;DOID:0050687,1.75e-19,143;DOID:305,3.69e-15,106;DOID:0050686,9.50e-13,137 | |||
|ontology_enrichment_uberon=UBERON:0000077!8.31e-08!130;UBERON:0001041!2.16e-07!98;UBERON:0001737!3.07e-07!9;UBERON:0008947!3.43e-07!38;UBERON:0003258!3.43e-07!38;UBERON:0004921!8.57e-07!129;UBERON:0004185!8.57e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;3.69e-08;9!UBERON:0001557;3.69e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,5.05e-08,9;UBERON:0008947,3.41e-07,38;UBERON:0003258,3.41e-07,38 | |||
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| ||
|short_description=p3@CDK2 | |||
}} | }} |
Latest revision as of 09:15, 19 September 2015
Short description: | p3@CDK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CDK2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000266970, ENST00000556464, NM_001798, NM_052827, uc001sit.3, uc001siu.3, uc010spy.1_5end |
EntrezGene: | CDK2 |
HGNC: | 1771 |
UniProt: | P24941 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 8.69e-13 | 253 |
Ontology term | p-value | n |
---|---|---|
larynx | 5.05e-08 | 9 |
respiratory primordium | 3.41e-07 | 38 |
endoderm of foregut | 3.41e-07 | 38 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 3.05e-25 | 239 |
cancer | 3.28e-25 | 235 |
cell type cancer | 1.75e-19 | 143 |
carcinoma | 3.69e-15 | 106 |
organ system cancer | 9.50e-13 | 137 |