FFCP PHASE1:Hg19::chr12:6422294..6422299,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55200 | |EntrezGene=55200 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25562 | |HGNC=25562 | ||
|TSSclassifier=strong | |||
|UniProt=Q3KR16 | |UniProt=Q3KR16 | ||
|association_with_transcript=477bp_to_ENST00000449001,NM_001144857,uc010sex.1_5end | |||
|cluster_id=chr12:6422294..6422299,+ | |||
|coexpression_cluster_id=C84 | |||
|description=CAGE_peak_3_at_PLEKHG6_5end | |||
|id=chr12:6422294..6422299,+ | |||
|ontology_enrichment_celltype=CL:0000453!8.61e-10!5;CL:0002541!2.17e-09!3;CL:0000990!7.38e-08!8;CL:0002150!7.82e-08!3;CL:0000861!7.82e-08!3;CL:0002251!3.27e-07!21;CL:0001014!4.29e-07!2;CL:0001016!4.29e-07!2;CL:0000039!5.45e-07!7;CL:0000586!5.45e-07!7;CL:0000083!9.81e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0002541;2.23e-27;3!CL:0000039;2.78e-26;7!CL:0000586;2.78e-26;7!CL:0001014;2.23e-11;2!CL:0001016;2.23e-11;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,2.08e-27,3;CL:0000039,3.17e-26,7;CL:0000586,3.17e-26,7;CL:0001014,2.02e-11,2;CL:0001016,2.02e-11,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!6.02e-17!14;DOID:305!3.50e-13!106;DOID:0050687!9.62e-11!143;DOID:162!1.50e-07!235;DOID:14566!3.25e-07!239;DOID:1793!9.81e-07!4 | |||
|ontology_enrichment_disease_v019=DOID:3151;5.71e-21;1!DOID:178;5.71e-21;1!DOID:326;5.71e-21;1!DOID:3978;5.71e-21;1!DOID:3394;5.71e-21;1!DOID:5844;5.71e-21;1!DOID:3149;5.71e-21;1!DOID:3451;3.52e-11;2!DOID:4159;3.52e-11;2!DOID:114;3.52e-11;2!DOID:0060122;3.52e-11;2!DOID:3095;7.92e-09;22!DOID:2994;7.92e-09;22 | |||
|ontology_enrichment_disease_v019_2=DOID:178,3.45e-21,1;DOID:326,3.45e-21,1;DOID:3978,3.45e-21,1;DOID:3394,3.45e-21,1;DOID:5844,3.45e-21,1;DOID:3151,9.43e-21,1;DOID:3149,9.43e-21,1;DOID:114,2.73e-11,2;DOID:3451,4.52e-11,2;DOID:4159,4.52e-11,2;DOID:0060122,4.52e-11,2;DOID:3095,8.25e-09,22;DOID:2994,8.25e-09,22 | |||
|ontology_enrichment_uberon=UBERON:0003729!6.06e-14!5;UBERON:0003343!1.68e-11!4;UBERON:0004785!1.68e-11!4;UBERON:0000344!1.84e-10!12;UBERON:0003124!4.48e-10!7;UBERON:0000476!2.17e-09!3;UBERON:0000920!2.17e-09!3;UBERON:0005631!4.40e-09!14;UBERON:0000158!4.40e-09!14;UBERON:0000478!5.90e-08!24;UBERON:0004923!1.69e-07!57;UBERON:0000161!5.80e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;2.23e-27;3!UBERON:0000920;2.23e-27;3!UBERON:0005631;6.41e-09;10!UBERON:0000158;6.41e-09;10!UBERON:0000478;4.52e-08;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,2.08e-27,3;UBERON:0003124,2.37e-12,7;UBERON:0000478,4.52e-08,24 | |||
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| ||
|short_description=p3@PLEKHG6 | |||
}} | }} |
Latest revision as of 19:50, 19 September 2015
Short description: | p3@PLEKHG6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PLEKHG6_5end |
Coexpression cluster: | C84_choriocarcinoma_pancreatic_Wilms_Mallassezderived_thymus_salivary_colon |
Association with transcript: | 477bp_to_ENST00000449001, NM_001144857, uc010sex.1_5end |
EntrezGene: | PLEKHG6 |
HGNC: | 25562 |
UniProt: | Q3KR16 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 2.08e-27 | 3 |
germ line cell | 3.17e-26 | 7 |
germ cell | 3.17e-26 | 7 |
CD1a-positive Langerhans cell | 2.02e-11 | 2 |
immature CD1a-positive Langerhans cell | 2.02e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 2.08e-27 | 3 |
chorion | 2.37e-12 | 7 |
extraembryonic structure | 4.52e-08 | 24 |
Ontology term | p-value | n |
---|---|---|
vascular disease | 3.45e-21 | 1 |
ischemia | 3.45e-21 | 1 |
extrinsic cardiomyopathy | 3.45e-21 | 1 |
myocardial ischemia | 3.45e-21 | 1 |
myocardial infarction | 3.45e-21 | 1 |
skin squamous cell carcinoma | 9.43e-21 | 1 |
keratoacanthoma | 9.43e-21 | 1 |
heart disease | 2.73e-11 | 2 |
skin carcinoma | 4.52e-11 | 2 |
skin cancer | 4.52e-11 | 2 |
integumentary system cancer | 4.52e-11 | 2 |
germ cell and embryonal cancer | 8.25e-09 | 22 |
germ cell cancer | 8.25e-09 | 22 |