FFCP PHASE1:Hg19::chr12:96184913..96184938,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:96184913..96184938,- to FFCP PHASE1:Hg19::chr12:96184913..96184938,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=59277 | |EntrezGene=59277 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13658 | |HGNC=13658 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000538383,uc009ztg.2_5end | |||
|cluster_id=chr12:96184913..96184938,- | |||
|description=CAGE_peak_6_at_NTN4_5end | |||
|id=chr12:96184913..96184938,- | |||
|ontology_enrichment_celltype=CL:0000066!6.47e-08!254 | |||
|ontology_enrichment_celltype_v019=CL:1000415;1.11e-14;2!CL:1001319;1.36e-08;1!CL:1000600;1.36e-08;1!CL:0000222;3.44e-08;1!CL:0000313;3.44e-08;1!CL:0002563;8.81e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:1000415,4.47e-15,2;CL:0000066,3.23e-10,253;CL:1001319,1.41e-08,1;CL:1000600,1.41e-08,1;CL:0000313,2.89e-08,1;CL:0002563,1.52e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0008425;1.36e-08;1 | |||
|ontology_enrichment_disease=DOID:305!5.52e-08!106 | |||
|ontology_enrichment_disease_v019=DOID:1749;3.25e-12;14!DOID:3111;1.13e-08;1!DOID:3603;1.13e-08;1!DOID:2152;3.44e-08;1!DOID:3112;3.44e-08;1!DOID:2513;3.44e-08;1!DOID:299;7.49e-07;25 | |||
|ontology_enrichment_disease_v019_2=DOID:305,9.43e-18,106;DOID:0050687,6.41e-14,143;DOID:1749,2.14e-12,14;DOID:3111,1.13e-08,1;DOID:3603,1.13e-08,1;DOID:2152,2.89e-08,1;DOID:3112,3.10e-08,1;DOID:2513,4.41e-08,1;DOID:162,5.66e-08,235;DOID:14566,9.97e-08,239;DOID:299,7.85e-07,25 | |||
|ontology_enrichment_uberon=UBERON:0005911!1.18e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0000344;3.42e-12;20!UBERON:0002110;4.30e-10;3!UBERON:0002294;2.26e-09;7!UBERON:0001173;2.26e-09;7!UBERON:0004645;1.36e-08;1!UBERON:0001256;1.36e-08;1!UBERON:0001259;1.36e-08;1!UBERON:0003350;2.11e-08;8!UBERON:0004911;3.44e-08;1!UBERON:0002171;3.44e-08;1!UBERON:0006518;3.44e-08;1!UBERON:0008949;3.44e-08;1!UBERON:0000101;3.44e-08;1!UBERON:0002167;3.44e-08;1!UBERON:0003343;5.63e-08;4!UBERON:0004785;5.63e-08;4!UBERON:0001242;8.81e-08;4!UBERON:0001262;8.81e-08;4!UBERON:0004786;8.81e-08;4!UBERON:0004808;8.81e-08;4!UBERON:0001277;8.81e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,3.91e-12,20;UBERON:0002110,2.36e-10,3;UBERON:0006242,2.36e-10,3;UBERON:0004645,1.41e-08,1;UBERON:0001256,1.41e-08,1;UBERON:0001259,1.41e-08,1;UBERON:0002171,2.02e-08,1;UBERON:0006518,2.02e-08,1;UBERON:0008949,2.02e-08,1;UBERON:0000101,2.02e-08,1;UBERON:0002167,2.02e-08,1;UBERON:0004911,2.89e-08,1;UBERON:0003350,3.21e-08,8;UBERON:0003343,3.97e-08,4;UBERON:0004785,3.97e-08,4;UBERON:0001242,1.52e-07,4;UBERON:0001262,1.52e-07,4;UBERON:0004786,1.52e-07,4;UBERON:0004808,1.52e-07,4;UBERON:0001277,1.52e-07,4;UBERON:0002294,1.71e-07,9;UBERON:0001173,1.71e-07,9;UBERON:0004912,1.71e-07,9;UBERON:0005911,9.52e-07,82 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0.527533956456907,0.123766352960047,0,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0.12786256184353,0,0.50133791063589,0.144846518960824,0.795285947051099,0,0.0945348171640679,0,0,0.654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0.71153252537342,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.25326102332916,0.132409180813219,0.286836620748814,0,0.560677600142307,0,0.49333509683432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0.340296549480063,0.538168907066586,0.213557388818567,0,0,0.103052529238439,0.772921620136887,0.37223371266318,0,0,0,0.0920498986422993,0.161646056818812,0.355009592516614,0.10075209822764,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0.269662616320329,0,0,0,0,0,0,0,0,0,0,1.10689594688802,0.171567810298526,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0.93733833986777,0.16798212819886,0.141775097242386,0.179117045405697,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.22001485746285,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0.718874566474748,1.14861935834114,0,0,0,0,0,0,0.431255149719035,0,0,0,0,0.335032530668698,0,0,0,0,0,0,0.271265023699736,0.207970861530807,0.178428988797162,0.157702415033935,0,0.300946099727719,0,0,0.664225598535437,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321707842287215,0,0,0,0,0,0.116210378459959,0.241718899183244,0.200506470303285,0.276242966807689,0.114814448164607,0,0,0,1.38627606787947,0.784349769176855,1.46139224653261,0.73886140225013,0,0,0.431831832204279,0,0,0,0,0,0,0,0,1.02580050046556,0,0,0,0,0.082509499920588,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0.330569830721956,0.192190067365106,0.127612712494584,0,0,0,0,0,0.532306030317022,0,0,0.715624433709956,0,0.632758849437452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0.405820753925408,0.30982349809975,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.213648142254946,0,1.47024129588619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0,0,0,0,0.19924798825107,0,0,0,0,1.24415835064723,1.25815691606258,0,0,0.0986434056369336,0,0,0,0,0,0,2.0115799999125,0.724999575434793,0,0.508507300585533,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0.41827123283581,0.230850775511391,0.113942055847001,0,0,0.217294743844016,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,5.38668266925187,1.13082457147153,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0,0.394584402849391,0,0.30607276163049,0,0,0,0.664653872707185,0.330991955875499,0,0,0.284609546029793,0.277349346026277,0.347119476670262,0.0979923974143777,0,0,0,0,0,0,0,0.0882561266915003,0.225980740780532,0,0,0.0633107959558787,1.36885967914362,1.76349404553374,0,0.39961921916426,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0.0671834724867263,0,0,0.0787831823072236,0,0.0674035438541849,0.688992370603241,0,0,0,0,0.137539436597234,0,0,0,0.0607495566580247,0,0.394028536495991,0.996637174564964,0.316801009558219,0,1.91915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.961086713109252,0.157204305099666,1.65695622138878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0.470531639396343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,1.20008329398946,0,0,1.26184898228651,0,0,0.521988583930423,0.453411851024545,0.231522474323834,0.244736704506468,0,0,0,0.706756583783524,0.192914038270915,0,0,2.41801239211839,0,0,0,0,0,0.982829546539238,0,3.59230609709666,0,0,0,6.81019144280203,0.552317850755522,0.279759015438889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0.161475645631851,0,0,2.83127336034577,0.183428598521679,1.73288499225507,0,0,0,0.376051641746286,0,0,0,1.31017534008077,0.739280431085226,0.135075169236789,0,0,0,0.546974809018219,0,0.496211178389294,0,0.766574565837572,0,0,0,0,0,0.115233987555779,0,0.203909198930495,0.197318320688547,1.30013224972365,0.333694205676207,0.39246546425257,0,0,0,0.215927591218621,0,0,0.316027223465453,0,0,0,0,0,0,0,0,0,0.423387050190929,0.4582137370881,0,0,1.34226518157351,0,0,0,0.102662806856247,1.1598144313382,0,0,0,0,0,0,0,0,0.218559560503957,0,0.245148321753905,0,0,0.297046400327086,0,0,0.657887425858975,0.966868319603658,0,0.178553938605658,1.05868461514708,0.160482733378337,0,0.458729283404541,0,0,0.0679914901909147,0.436350690340377,0,0,0,0,0,0,1.26698501011437,0,0,0,0,0,0,0,0.103432995861895,0,0,0.0645889098360061,0.124149428591716,0.448527450322454,0.0636471582781649,0.202117188958219,0,0,0,0.286888821570705,0.332660356546013,2.36069478971826,0.426909383510862,0,0,0,0.366724332548599,0,0,0,0 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| ||
|short_description=p6@NTN4 | |||
}} | }} |
Latest revision as of 02:54, 16 September 2015
Short description: | p6@NTN4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_NTN4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000538383, uc009ztg.2_5end |
EntrezGene: | NTN4 |
HGNC: | 13658 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of gall bladder | 4.47e-15 | 2 |
epithelial cell | 3.23e-10 | 253 |
bladder cell | 1.41e-08 | 1 |
lower urinary tract cell | 1.41e-08 | 1 |
serous secreting cell | 2.89e-08 | 1 |
intestinal epithelial cell | 1.52e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
mucosa | 3.91e-12 | 20 |
gallbladder | 2.36e-10 | 3 |
gall bladder primordium | 2.36e-10 | 3 |
urinary bladder urothelium | 1.41e-08 | 1 |
wall of urinary bladder | 1.41e-08 | 1 |
mucosa of urinary bladder | 1.41e-08 | 1 |
lower lobe of right lung | 2.02e-08 | 1 |
right lung lobe | 2.02e-08 | 1 |
lower lobe of lung | 2.02e-08 | 1 |
lobe of lung | 2.02e-08 | 1 |
right lung | 2.02e-08 | 1 |
epithelium of female gonad | 2.89e-08 | 1 |
epithelium of mucosa | 3.21e-08 | 8 |
mucosa of oral region | 3.97e-08 | 4 |
respiratory system mucosa | 3.97e-08 | 4 |
intestinal mucosa | 1.52e-07 | 4 |
wall of intestine | 1.52e-07 | 4 |
gastrointestinal system mucosa | 1.52e-07 | 4 |
gastrointestinal system epithelium | 1.52e-07 | 4 |
intestinal epithelium | 1.52e-07 | 4 |
biliary system | 1.71e-07 | 9 |
biliary tree | 1.71e-07 | 9 |
biliary bud | 1.71e-07 | 9 |
endo-epithelium | 9.52e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 9.43e-18 | 106 |
cell type cancer | 6.41e-14 | 143 |
squamous cell carcinoma | 2.14e-12 | 14 |
cystadenocarcinoma | 1.13e-08 | 1 |
mucinous cystadenocarcinoma | 1.13e-08 | 1 |
ovary epithelial cancer | 2.89e-08 | 1 |
papillary adenocarcinoma | 3.10e-08 | 1 |
basal cell carcinoma | 4.41e-08 | 1 |
cancer | 5.66e-08 | 235 |
disease of cellular proliferation | 9.97e-08 | 239 |
adenocarcinoma | 7.85e-07 | 25 |