FFCP PHASE1:Hg19::chr12:98943291..98943305,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:98943291..98943305,+ to FFCP PHASE1:Hg19::chr12:98943291..98943305,+: NSchange) |
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(8 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:98943291..98943305,+ | |||
|description=CAGE_peak_at_chr12:98943291..98943305,+ | |||
|id=chr12:98943291..98943305,+ | |||
|ontology_enrichment_celltype=CL:0000542!6.18e-10!53;CL:0000051!6.18e-10!53;CL:0000838!2.05e-09!52;CL:0000037!1.94e-07!172;CL:0000566!1.94e-07!172;CL:0002032!6.39e-07!165;CL:0000837!6.39e-07!165;CL:0000945!9.35e-07!24;CL:0000826!9.35e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000945;2.21e-10;24!CL:0000542;8.42e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,4.32e-10,24;CL:0000826,4.32e-10,24;CL:0000542,1.04e-08,53;CL:0000051,1.04e-08,53;CL:0000838,4.86e-08,52 | |||
|ontology_enrichment_development_v019=CL:0000051;8.42e-07;53 | |||
|ontology_enrichment_disease=DOID:162!8.16e-24!235;DOID:14566!1.60e-22!239;DOID:305!1.76e-14!106;DOID:0050687!3.48e-14!143;DOID:2531!1.05e-12!51;DOID:0060083!1.05e-12!51;DOID:0050686!7.07e-11!137;DOID:1240!1.37e-08!39 | |||
|ontology_enrichment_disease_v019=DOID:0060058;3.76e-10;10!DOID:2531;1.21e-08;51!DOID:0060083;1.21e-08;51!DOID:1240;2.14e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:162,8.74e-22,235;DOID:14566,1.24e-20,239;DOID:2531,1.43e-14,51;DOID:0060083,1.43e-14,51;DOID:0050687,1.48e-12,143;DOID:305,2.09e-11,106;DOID:0060058,8.20e-10,10;DOID:0050686,1.03e-09,137;DOID:1240,1.20e-08,39 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.91e-07;9!UBERON:0001557;1.91e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,3.25e-08,9 | |||
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| ||
|short_description=p@chr12:98943291..98943305,+ | |||
}} | }} |
Latest revision as of 14:03, 24 July 2015
Short description: | p@chr12:98943291..98943305, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:98943291..98943305, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 4.32e-10 | 24 |
pro-B cell | 4.32e-10 | 24 |
lymphocyte | 1.04e-08 | 53 |
common lymphoid progenitor | 1.04e-08 | 53 |
lymphoid lineage restricted progenitor cell | 4.86e-08 | 52 |
Ontology term | p-value | n |
---|---|---|
larynx | 3.25e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
cancer | 8.74e-22 | 235 |
disease of cellular proliferation | 1.24e-20 | 239 |
hematologic cancer | 1.43e-14 | 51 |
immune system cancer | 1.43e-14 | 51 |
cell type cancer | 1.48e-12 | 143 |
carcinoma | 2.09e-11 | 106 |
lymphoma | 8.20e-10 | 10 |
organ system cancer | 1.03e-09 | 137 |
leukemia | 1.20e-08 | 39 |