FFCP PHASE1:Hg19::chr13:76413879..76413884,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr13:76413879..76413884,+ to FFCP PHASE1:Hg19::chr13:76413879..76413884,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4008 | |EntrezGene=4008 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6646 | |HGNC=6646 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=350bp_to_ENST00000533809_5end | |||
|cluster_id=chr13:76413879..76413884,+ | |||
|description=CAGE_peak_33_at_LMO7_5end | |||
|id=chr13:76413879..76413884,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000511;5.51e-09;1!CL:0002625;5.51e-09;1!CL:0000222;5.51e-09;1!CL:0000216;5.51e-09;1!CL:0002616;5.51e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002616,3.05e-09,1;CL:0000511,3.58e-09,1;CL:0002625,3.58e-09,1;CL:0000216,3.58e-09,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease_v019=DOID:1192;1.69e-11;3!DOID:3369;1.60e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1192,1.66e-11,3;DOID:3369,1.60e-09,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;5.51e-09;1!UBERON:0001343;5.51e-09;1!UBERON:0002171;5.51e-09;1!UBERON:0006518;5.51e-09;1!UBERON:0008949;5.51e-09;1!UBERON:0004910;5.51e-09;1!UBERON:0000101;5.51e-09;1!UBERON:0004813;5.51e-09;1!UBERON:0002167;5.51e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,3.58e-09,1;UBERON:0001343,3.58e-09,1;UBERON:0004910,3.58e-09,1;UBERON:0005154,3.58e-09,1;UBERON:0005295,3.58e-09,1;UBERON:0004813,3.58e-09,1;UBERON:0005297,3.58e-09,1;UBERON:0005294,3.58e-09,1;UBERON:0010141,3.58e-09,1;UBERON:0005891,3.58e-09,1;UBERON:0002171,7.85e-09,1;UBERON:0006518,7.85e-09,1;UBERON:0008949,7.85e-09,1;UBERON:0000101,7.85e-09,1;UBERON:0002167,7.85e-09,1 | |||
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| ||
|short_description=p33@LMO7 | |||
}} | }} |
Latest revision as of 00:23, 18 September 2015
Short description: | p33@LMO7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_33_at_LMO7_5end |
Coexpression cluster: | NA |
Association with transcript: | 350bp_to_ENST00000533809_5end |
EntrezGene: | LMO7 |
HGNC: | 6646 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
perirenal adipocyte cell | 3.05e-09 | 1 |
androgen binding protein secreting cell | 3.58e-09 | 1 |
seminiferous tubule epithelial cell | 3.58e-09 | 1 |
Sertoli cell | 3.58e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 3.58e-09 | 1 |
seminiferous tubule of testis | 3.58e-09 | 1 |
epithelium of male gonad | 3.58e-09 | 1 |
epithelial cord | 3.58e-09 | 1 |
sex cord | 3.58e-09 | 1 |
seminiferous tubule epithelium | 3.58e-09 | 1 |
testis sex cord | 3.58e-09 | 1 |
genital ridge | 3.58e-09 | 1 |
primitive sex cord of indifferent gonad | 3.58e-09 | 1 |
coelomic epithelium | 3.58e-09 | 1 |
lower lobe of right lung | 7.85e-09 | 1 |
right lung lobe | 7.85e-09 | 1 |
lower lobe of lung | 7.85e-09 | 1 |
lobe of lung | 7.85e-09 | 1 |
right lung | 7.85e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system neoplasm | 1.66e-11 | 3 |
peripheral primitive neuroectodermal tumor | 1.60e-09 | 1 |