FFCP PHASE1:Hg19::chr16:28503312..28503321,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr16:28503312..28503321,- to FFCP PHASE1:Hg19::chr16:28503312..28503321,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1201 | |EntrezGene=1201 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2074 | |HGNC=2074 | ||
|TSSclassifier=strong | |||
|UniProt=B4DFF3 | |UniProt=B4DFF3 | ||
|association_with_transcript=4bp_to_ENST00000357857_5end | |||
|cluster_id=chr16:28503312..28503321,- | |||
|description=CAGE_peak_8_at_CLN3_5end | |||
|id=chr16:28503312..28503321,- | |||
|ontology_enrichment_celltype=CL:0000039!2.43e-08!7;CL:0000586!2.43e-08!7 | |||
|ontology_enrichment_celltype_v019=CL:0000039;8.90e-33;7!CL:0000586;8.90e-33;7!CL:0002262;2.07e-08;2!CL:1000398;2.07e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,4.63e-33,7;CL:0000586,4.63e-33,7;CL:0002262,2.00e-08,2;CL:1000398,2.00e-08,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1799;1.66e-15;1!DOID:10165;1.66e-15;1!DOID:1798;1.66e-15;1!DOID:3095;1.14e-10;22!DOID:2994;1.14e-10;22 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,3.66e-15,1;DOID:10165,3.66e-15,1;DOID:1798,3.66e-15,1;DOID:3095,9.29e-11,22;DOID:2994,9.29e-11,22 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001281;2.07e-08;2!UBERON:0003497;2.07e-08;2!UBERON:0003909;2.07e-08;2!UBERON:0003835;2.07e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001281,2.00e-08,2;UBERON:0003497,2.00e-08,2;UBERON:0003909,2.00e-08,2;UBERON:0003835,2.00e-08,2 | |||
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| ||
|short_description=p8@CLN3 | |||
}} | }} |
Latest revision as of 23:54, 15 September 2015
Short description: | p8@CLN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_CLN3_5end |
Coexpression cluster: | NA |
Association with transcript: | 4bp_to_ENST00000357857_5end |
EntrezGene: | CLN3 |
HGNC: | 2074 |
UniProt: | B4DFF3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 4.63e-33 | 7 |
germ cell | 4.63e-33 | 7 |
endothelial cell of sinusoid | 2.00e-08 | 2 |
endothelial cell of hepatic sinusoid | 2.00e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
hepatic sinusoid | 2.00e-08 | 2 |
abdomen blood vessel | 2.00e-08 | 2 |
sinusoid | 2.00e-08 | 2 |
abdominal segment blood vessel | 2.00e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 3.66e-15 | 1 |
endocrine pancreas cancer | 3.66e-15 | 1 |
pancreatic endocrine carcinoma | 3.66e-15 | 1 |
germ cell and embryonal cancer | 9.29e-11 | 22 |
germ cell cancer | 9.29e-11 | 22 |