FFCP PHASE1:Hg19::chr17:73636019..73636044,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:73636019..73636044,- to FFCP PHASE1:Hg19::chr17:73636019..73636044,-: NSchange) |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:73636019..73636044,- | |||
|description=CAGE_peak_at_chr17:73636019..73636044,- | |||
|id=chr17:73636019..73636044,- | |||
|ontology_enrichment_celltype=CL:0000239!1.12e-08!3;CL:1000615!1.12e-08!3;CL:0002306!1.12e-08!3;CL:1000507!1.51e-07!12;CL:1000494!1.51e-07!12;CL:1000449!2.07e-07!16;CL:0002681!6.81e-07!13;CL:0002584!6.81e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0000313;1.72e-10;1!CL:0002537;3.36e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,1.80e-10,1;CL:0002537,3.36e-08,5 | |||
|ontology_enrichment_development_v019=UBERON:0003124;2.07e-10;1!UBERON:0009143;2.48e-10;1!UBERON:0006242;3.39e-10;1!UBERON:0007123;7.12e-08;5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2152;1.72e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,1.80e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0005631!1.08e-17!14;UBERON:0000158!1.08e-17!14;UBERON:0000058!1.77e-12!26;UBERON:0001008!1.82e-11!45;UBERON:0000080!1.03e-10!18;UBERON:0002120!1.03e-10!18;UBERON:0004875!1.03e-10!18;UBERON:0005721!1.03e-10!18;UBERON:0005754!1.03e-10!18;UBERON:0007297!1.03e-10!18;UBERON:0004175!1.27e-10!25;UBERON:0006554!3.45e-10!44;UBERON:0002113!5.86e-10!27;UBERON:0003918!5.86e-10!27;UBERON:0005095!5.86e-10!27;UBERON:0007687!5.86e-10!27;UBERON:0000305!8.02e-10!7;UBERON:0000489!1.28e-09!32;UBERON:0003124!1.65e-09!7;UBERON:0004876!1.85e-09!20;UBERON:0003064!2.03e-09!37;UBERON:0000478!2.09e-09!24;UBERON:0006555!5.07e-09!17;UBERON:0005103!5.07e-09!17;UBERON:0000083!5.07e-09!17;UBERON:0009201!5.07e-09!17;UBERON:0004819!5.07e-09!17;UBERON:0006553!5.07e-09!17;UBERON:0003074!5.07e-09!17;UBERON:0003060!5.07e-09!17;UBERON:0003887!6.35e-09!21;UBERON:0001723!6.92e-09!3;UBERON:0001033!6.92e-09!3;UBERON:0010056!6.92e-09!3;UBERON:0006947!7.50e-09!3;UBERON:0004054!7.50e-09!3;UBERON:0006853!1.12e-08!3;UBERON:0007685!1.12e-08!3;UBERON:0004134!1.12e-08!3;UBERON:0003133!1.20e-08!48;UBERON:0005156!1.38e-08!59;UBERON:0000990!1.38e-08!59;UBERON:0004871!1.54e-08!8;UBERON:0002110!1.66e-08!3;UBERON:0006242!1.66e-08!3;UBERON:0006562!4.19e-08!11;UBERON:0002553!7.72e-08!70;UBERON:0009773!1.51e-07!12;UBERON:0001231!1.51e-07!12;UBERON:0004810!1.51e-07!12;UBERON:0004211!2.07e-07!16;UBERON:0001285!2.07e-07!16;UBERON:0007684!2.07e-07!16;UBERON:0003220!2.07e-07!16;UBERON:0004208!2.07e-07!16;UBERON:0000161!4.46e-07!35;UBERON:0003886!6.47e-07!63;UBERON:0001225!6.81e-07!13;UBERON:0008987!6.81e-07!13;UBERON:0001987!8.66e-07!4;UBERON:0004340!8.66e-07!4;UBERON:0000464!9.03e-07!104 | |||
|ontology_enrichment_uberon_v019=UBERON:0001723;2.52e-12;3!UBERON:0001033;2.52e-12;3!UBERON:0004911;1.72e-10;1!UBERON:0002372;7.22e-10;1!UBERON:0000996;7.22e-10;1!UBERON:0004913;7.22e-10;1!UBERON:0003703;7.22e-10;1!UBERON:0001961;7.22e-10;1!UBERON:0001744;7.22e-10;1!UBERON:0001042;7.22e-10;1!UBERON:0001735;7.22e-10;1!UBERON:0001174;7.22e-10;1!UBERON:0004914;7.22e-10;1!UBERON:0005631;1.46e-08;10!UBERON:0000158;1.46e-08;10!UBERON:0002046;7.12e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,1.78e-12,3;UBERON:0001033,1.78e-12,3;UBERON:0010056,1.78e-12,3;UBERON:0004911,1.80e-10,1;UBERON:0005631,1.90e-10,14;UBERON:0000158,1.90e-10,14;UBERON:0002372,7.55e-10,1;UBERON:0001961,7.55e-10,1;UBERON:0001744,7.55e-10,1;UBERON:0001735,7.55e-10,1;UBERON:0000996,9.82e-10,1;UBERON:0004913,1.17e-09,1;UBERON:0003703,1.17e-09,1;UBERON:0001174,1.17e-09,1;UBERON:0004914,1.17e-09,1;UBERON:0001042,2.73e-08,10;UBERON:0009145,2.73e-08,10;UBERON:0008814,6.98e-08,18;UBERON:0002046,7.51e-08,5;UBERON:0004117,7.51e-08,5;UBERON:0007689,7.51e-08,5;UBERON:0007123,7.51e-08,5;UBERON:0003091,7.51e-08,5;UBERON:0006562,1.40e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,1.39560233594486,0.218441372130172,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0.364295288292542,0.370784442784429,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.644566922551274,0,0,0,0.451199612907412,0.539107359730903,0,1.46139224653261,0,0,0,0,0,0,0,0.509752546090077,1.66215201785745,0.223874754722178,0,0,0,0,0,1.854738209659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.753150406214233,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.63982351160608,0.593929361665277,6.45037474408387,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.493217028184668,0,0,0,0,0,0.520855522170466,0,0,0,0.762760950878299,0,0,0,0,0,0,0,0,0,0,0,0.83654246567162,0.384751292518985,0,0,0.0897576444097721,0,1.5950057986596,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,2.28525931422807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0.873633341210151,0,0,0,0,3.20063754411784,0,0.225980740780532,0,0,0,0.391102765469606,0.0801588202515337,2.34798294213288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0.335434687599266,0.945668487590378,0.734364233889974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0.0752103283492573,0,0,0,0,1.18284868973636,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,6.74138013236055,0,0,0,0,0,0,0.39246546425257,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860454717640555,0,0,0.846774100381858,0.22910686854405,0,0,7.04689220326092,0,3.65753774946808,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0,0,0,0,0,0,2.19100916473955,0.917458566809082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,2.13233981900981,0.476128862927481,0,0.124149428591716,0,1.40023748211963,2.22328907854041,1.52401723527873,1.71116650542641,1.41439311330634,0.358611026963382,0,0,0,0,0,0,0.122241444182866,0.813792356631477,1.33151354837103,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,1.39560233594486,0.218441372130172,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0.364295288292542,0.370784442784429,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.644566922551274,0,0,0,0.451199612907412,0.539107359730903,0,1.46139224653261,0,0,0,0,0,0,0,0.509752546090077,1.66215201785745,0.223874754722178,0,0,0,0,0,1.854738209659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.753150406214233,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.63982351160608,0.593929361665277,6.45037474408387,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.493217028184668,0,0,0,0,0,0.520855522170466,0,0,0,0.762760950878299,0,0,0,0,0,0,0,0,0,0,0,0.83654246567162,0.384751292518985,0,0,0.0897576444097721,0,1.5950057986596,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,2.28525931422807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0.873633341210151,0,0,0,0,3.20063754411784,0,0.225980740780532,0,0,0,0.391102765469606,0.0801588202515337,2.34798294213288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0.335434687599266,0.945668487590378,0.734364233889974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0.0752103283492573,0,0,0,0,1.18284868973636,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,6.74138013236055,0,0,0,0,0,0,0.39246546425257,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860454717640555,0,0,0.846774100381858,0.22910686854405,0,0,7.04689220326092,0,3.65753774946808,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0,0,0,0,0,0,2.19100916473955,0.917458566809082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,2.13233981900981,0.476128862927481,0,0.124149428591716,0,1.40023748211963,2.22328907854041,1.52401723527873,1.71116650542641,1.41439311330634,0.358611026963382,0,0,0,0,0,0,0.122241444182866,0.813792356631477,1.33151354837103,0.201273793591026,0 | ||
|short_description=p@chr17:73636019..73636044,- | |||
}} | }} |
Latest revision as of 21:09, 25 July 2015
Short description: | p@chr17:73636019..73636044, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:73636019..73636044, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 1.80e-10 | 1 |
amnion mesenchymal stem cell | 3.36e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
tongue | 1.78e-12 | 3 |
gustatory system | 1.78e-12 | 3 |
future tongue | 1.78e-12 | 3 |
epithelium of female gonad | 1.80e-10 | 1 |
extraembryonic membrane | 1.90e-10 | 14 |
membranous layer | 1.90e-10 | 14 |
tonsil | 7.55e-10 | 1 |
mucosa-associated lymphoid tissue | 7.55e-10 | 1 |
lymphoid tissue | 7.55e-10 | 1 |
tonsillar ring | 7.55e-10 | 1 |
vagina | 9.82e-10 | 1 |
hepatopancreatic ampulla | 1.17e-09 | 1 |
extrahepatic bile duct | 1.17e-09 | 1 |
common bile duct | 1.17e-09 | 1 |
duodenal papilla | 1.17e-09 | 1 |
chordate pharynx | 2.73e-08 | 10 |
pharyngeal region of foregut | 2.73e-08 | 10 |
pharyngeal arch system | 6.98e-08 | 18 |
thyroid gland | 7.51e-08 | 5 |
pharyngeal pouch | 7.51e-08 | 5 |
thyroid diverticulum | 7.51e-08 | 5 |
pharyngeal pouch 2 | 7.51e-08 | 5 |
thyroid primordium | 7.51e-08 | 5 |
pharynx | 1.40e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 1.80e-10 | 1 |