FFCP PHASE1:Hg19::chr17:8216873..8216875,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:8216873..8216875,+ | |||
|coexpression_cluster_id=C1696 | |||
|description=CAGE_peak_at_chr17:8216873..8216875,+ | |||
|id=chr17:8216873..8216875,+ | |||
|ontology_enrichment_celltype=CL:0002139!3.96e-76!24;CL:0000115!1.02e-51!35;CL:0000071!4.70e-49!18;CL:0002546!4.70e-49!18;CL:0002078!8.24e-41!44;CL:0000213!4.00e-31!57;CL:0000215!4.00e-31!57;CL:0005020!1.44e-29!6;CL:0002138!1.44e-29!6;CL:0005022!1.44e-29!6;CL:1000413!5.79e-20!9;CL:0002543!1.61e-17!6;CL:0000222!2.39e-16!119;CL:0002144!3.98e-16!3;CL:0000076!1.64e-13!62;CL:0002544!2.02e-08!6;CL:0002545!8.06e-07!2;CL:0000220!8.91e-07!246 | |||
|ontology_enrichment_celltype_v019=CL:0000071;8.86e-34;18!CL:0002139;1.16e-25;24!CL:0002144;3.27e-23;3!CL:0000213;3.20e-16;58!CL:0000215;3.20e-16;58!CL:0002078;5.74e-13;45!CL:0002544;2.45e-12;6!CL:0002543;2.45e-12;6!CL:0000115;4.22e-12;36!CL:1000413;1.12e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000071,8.86e-34,18;CL:0002546,8.86e-34,18;CL:0002139,1.16e-25,24;CL:0002144,3.27e-23,3;CL:0000115,1.62e-17,36;CL:0002078,3.03e-14,45;CL:0002543,2.19e-12,6;CL:0002544,2.74e-12,6;CL:0000213,2.67e-11,58;CL:0000215,2.67e-11,58;CL:0000076,1.74e-10,63;CL:1000413,1.21e-08,9 | |||
|ontology_enrichment_development_v019=CL:0002546;8.86e-34;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!4.70e-49!18;UBERON:0004638!4.70e-49!18;UBERON:0004852!4.70e-49!18;UBERON:0000487!5.72e-40!22;UBERON:0006914!4.65e-35!25;UBERON:0000055!2.05e-25!69;UBERON:0001473!2.85e-22!8;UBERON:0004536!2.85e-22!8;UBERON:0006558!2.85e-22!8;UBERON:0002049!5.63e-22!79;UBERON:0007798!5.63e-22!79;UBERON:0003915!5.79e-20!9;UBERON:0004700!5.79e-20!9;UBERON:0001917!5.79e-20!9;UBERON:0002465!6.94e-18!10;UBERON:0004535!7.61e-18!110;UBERON:0001009!2.55e-17!113;UBERON:0001915!3.98e-16!3;UBERON:0001982!3.98e-16!3;UBERON:0001981!5.35e-14!60;UBERON:0007500!5.35e-14!60;UBERON:0004537!5.35e-14!60;UBERON:0006965!5.35e-14!60;UBERON:0004872!5.92e-12!84;UBERON:0001638!7.03e-12!9;UBERON:0003920!7.03e-12!9;UBERON:0004582!7.03e-12!9;UBERON:0000490!3.22e-08!138;UBERON:0003914!4.06e-08!118;UBERON:0004111!5.36e-07!241;UBERON:0005800!8.06e-07!2;UBERON:0001515!8.06e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;8.86e-34;18!UBERON:0001986;8.86e-34;18!UBERON:0004852;8.86e-34;18!UBERON:0000487;7.08e-28;22!UBERON:0006914;1.10e-24;25!UBERON:0010523;3.27e-23;3!UBERON:0001915;3.27e-23;3!UBERON:0001982;3.27e-23;3!UBERON:0000490;1.08e-19;33!UBERON:0007500;1.56e-12;56!UBERON:0001981;1.56e-12;56!UBERON:0004537;1.56e-12;56!UBERON:0001638;1.12e-08;9!UBERON:0003920;1.12e-08;9!UBERON:0003915;1.12e-08;9!UBERON:0004700;1.12e-08;9!UBERON:0001917;1.12e-08;9!UBERON:0004582;1.12e-08;9!UBERON:0000055;2.07e-08;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,8.86e-34,18;UBERON:0001986,8.86e-34,18;UBERON:0004852,8.86e-34,18;UBERON:0000487,7.08e-28,22;UBERON:0006914,1.10e-24,25;UBERON:0010523,3.27e-23,3;UBERON:0001915,3.27e-23,3;UBERON:0001982,3.27e-23,3;UBERON:0007500,3.99e-11,59;UBERON:0001981,3.99e-11,59;UBERON:0004537,3.99e-11,59;UBERON:0006965,3.99e-11,59;UBERON:0000055,8.58e-10,68;UBERON:0001638,1.04e-08,9;UBERON:0003920,1.04e-08,9;UBERON:0004582,1.04e-08,9;UBERON:0002049,1.14e-08,78;UBERON:0007798,1.14e-08,78;UBERON:0003915,1.21e-08,9;UBERON:0004700,1.21e-08,9;UBERON:0001917,1.21e-08,9;UBERON:0004872,3.31e-08,83 | |||
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|short_description=p@chr17:8216873..8216875,+ | |||
}} | }} |
Latest revision as of 23:21, 25 July 2015
Short description: | p@chr17:8216873..8216875, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:8216873..8216875, + |
Coexpression cluster: | C1696_Endothelial_Renal_chronic_Lymphatic_Fibroblast_Hepatic_Mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood vessel endothelial cell | 8.86e-34 | 18 |
embryonic blood vessel endothelial progenitor cell | 8.86e-34 | 18 |
endothelial cell of vascular tree | 1.16e-25 | 24 |
capillary endothelial cell | 3.27e-23 | 3 |
endothelial cell | 1.62e-17 | 36 |
meso-epithelial cell | 3.03e-14 | 45 |
vein endothelial cell | 2.19e-12 | 6 |
aortic endothelial cell | 2.74e-12 | 6 |
lining cell | 2.67e-11 | 58 |
barrier cell | 2.67e-11 | 58 |
squamous epithelial cell | 1.74e-10 | 63 |
endothelial cell of artery | 1.21e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 8.86e-34 | 18 |
endothelium | 8.86e-34 | 18 |
cardiovascular system endothelium | 8.86e-34 | 18 |
simple squamous epithelium | 7.08e-28 | 22 |
squamous epithelium | 1.10e-24 | 25 |
microcirculatory vessel | 3.27e-23 | 3 |
endothelium of capillary | 3.27e-23 | 3 |
capillary | 3.27e-23 | 3 |
epithelial tube open at both ends | 3.99e-11 | 59 |
blood vessel | 3.99e-11 | 59 |
blood vasculature | 3.99e-11 | 59 |
vascular cord | 3.99e-11 | 59 |
vessel | 8.58e-10 | 68 |
vein | 1.04e-08 | 9 |
venous blood vessel | 1.04e-08 | 9 |
venous system | 1.04e-08 | 9 |
vasculature | 1.14e-08 | 78 |
vascular system | 1.14e-08 | 78 |
endothelial tube | 1.21e-08 | 9 |
arterial system endothelium | 1.21e-08 | 9 |
endothelium of artery | 1.21e-08 | 9 |
splanchnic layer of lateral plate mesoderm | 3.31e-08 | 83 |