FFCP PHASE1:Hg19::chr19:30251122..30251130,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:30251122..30251130,+ to FFCP PHASE1:Hg19::chr19:30251122..30251130,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:30251122..30251130,+ | |||
|description=CAGE_peak_at_chr19:30251122..30251130,+ | |||
|id=chr19:30251122..30251130,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.75e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0002535;9.81e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000785,5.86e-09,2;CL:0000955,5.86e-09,2;CL:0000818,5.86e-09,2;CL:0000954,5.86e-09,2;CL:0000816,5.86e-09,2;CL:0002535,9.34e-09,2 | |||
|ontology_enrichment_development_v019=CL:0000954;9.81e-09;2 | |||
|ontology_enrichment_disease=DOID:162!5.77e-33!235;DOID:14566!5.35e-32!239;DOID:0050687!5.40e-24!143;DOID:0050686!2.50e-18!137;DOID:305!5.44e-18!106;DOID:299!3.54e-08!25;DOID:7!2.25e-07!39;DOID:2531!4.02e-07!51;DOID:0060083!4.02e-07!51 | |||
|ontology_enrichment_disease_v019=DOID:4468;6.40e-09;2!DOID:299;2.44e-08;25!DOID:193;4.21e-07;29!DOID:1749;8.78e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:162,3.30e-13,235;DOID:14566,9.33e-13,239;DOID:0050687,4.02e-10,143;DOID:0050686,6.56e-09,137;DOID:4468,1.22e-08,2;DOID:299,3.51e-08,25;DOID:305,3.49e-07,106;DOID:193,5.21e-07,29;DOID:1749,8.62e-07,14 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0006955;9.81e-09;2!UBERON:0004801;9.81e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,9.34e-09,2;UBERON:0004801,9.34e-09,2 | |||
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| ||
|short_description=p@chr19:30251122..30251130,+ | |||
}} | }} |
Latest revision as of 06:05, 26 July 2015
Short description: | p@chr19:30251122..30251130, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:30251122..30251130, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature B cell | 5.86e-09 | 2 |
pre-B-II cell | 5.86e-09 | 2 |
transitional stage B cell | 5.86e-09 | 2 |
small pre-B-II cell | 5.86e-09 | 2 |
immature B cell | 5.86e-09 | 2 |
epithelial cell of cervix | 9.34e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 9.34e-09 | 2 |
cervix epithelium | 9.34e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
cancer | 3.30e-13 | 235 |
disease of cellular proliferation | 9.33e-13 | 239 |
cell type cancer | 4.02e-10 | 143 |
organ system cancer | 6.56e-09 | 137 |
clear cell adenocarcinoma | 1.22e-08 | 2 |
adenocarcinoma | 3.51e-08 | 25 |
carcinoma | 3.49e-07 | 106 |
reproductive organ cancer | 5.21e-07 | 29 |
squamous cell carcinoma | 8.62e-07 | 14 |