FFCP PHASE1:Hg19::chr19:49714057..49714062,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:49714057..49714062,+ | |||
|coexpression_cluster_id=C2459 | |||
|description=CAGE_peak_at_chr19:49714057..49714062,+ | |||
|id=chr19:49714057..49714062,+ | |||
|ontology_enrichment_celltype=CL:0002322!1.08e-28!5;CL:0000147!1.15e-14!14;CL:0000148!1.33e-09!10;CL:0000541!1.33e-09!10;CL:0000710!3.75e-07!20;CL:0000342!4.34e-07!1;CL:0002565!4.34e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0000333;1.82e-27;5!CL:0000632;3.06e-12;3!CL:0002321;7.09e-10;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000632,2.89e-12,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:171!6.39e-22!10;DOID:3095!6.76e-13!22;DOID:2994!6.76e-13!22 | |||
|ontology_enrichment_disease_v019=DOID:171;3.91e-82;10!DOID:3095;8.85e-38;22!DOID:2994;8.85e-38;22!DOID:169;4.34e-23;6!DOID:3193;7.67e-18;2!DOID:962;7.67e-18;2!DOID:1192;2.31e-12;3 | |||
|ontology_enrichment_disease_v019_2=DOID:171,4.26e-82,10;DOID:3095,9.20e-38,22;DOID:2994,9.20e-38,22;DOID:169,4.34e-23,6;DOID:3193,7.67e-18,2;DOID:962,7.67e-18,2;DOID:1192,2.31e-12,3 | |||
|ontology_enrichment_uberon=UBERON:0007499!3.98e-08!25;UBERON:0009856!8.61e-08!26;UBERON:0002107!1.07e-07!19;UBERON:0006925!1.07e-07!19;UBERON:0008836!1.07e-07!19;UBERON:0002506!4.34e-07!1;UBERON:0001769!4.34e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;4.83e-74;4!UBERON:0000923;4.83e-74;4!UBERON:0010316;4.83e-74;4!UBERON:0005291;4.83e-74;4!UBERON:0002050;1.82e-59;5!UBERON:0005423;1.82e-59;5!UBERON:0000013;1.82e-27;5!UBERON:0002410;1.82e-27;5!UBERON:0003714;7.67e-18;2!UBERON:0000010;9.04e-16;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,1.82e-27,5;UBERON:0002410,1.82e-27,5;UBERON:0003714,7.67e-18,2;UBERON:0000010,9.04e-16,8 | |||
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|short_description=p@chr19:49714057..49714062,+ | |||
}} | }} |
Latest revision as of 16:02, 27 July 2015
Short description: | p@chr19:49714057..49714062, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:49714057..49714062, + |
Coexpression cluster: | C2459_neuroepithelioma_neuroectodermal_neuroblastoma_Hepatocyte_peripheral_Melanocyte_liver |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatic stellate cell | 2.89e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 1.82e-27 | 5 |
autonomic nervous system | 1.82e-27 | 5 |
neural tissue | 7.67e-18 | 2 |
peripheral nervous system | 9.04e-16 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 4.26e-82 | 10 |
germ cell and embryonal cancer | 9.20e-38 | 22 |
germ cell cancer | 9.20e-38 | 22 |
neuroendocrine tumor | 4.34e-23 | 6 |
peripheral nerve sheath neoplasm | 7.67e-18 | 2 |
neurofibroma | 7.67e-18 | 2 |
peripheral nervous system neoplasm | 2.31e-12 | 3 |