FFCP PHASE1:Hg19::chr19:56028989..56029016,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:56028989..56029016,+ to FFCP PHASE1:Hg19::chr19:56028989..56029016,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:56028989..56029016,+ | |||
|coexpression_cluster_id=C1063 | |||
|description=CAGE_peak_at_chr19:56028989..56029016,+ | |||
|id=chr19:56028989..56029016,+ | |||
|ontology_enrichment_celltype=CL:0000057!3.59e-08!75;CL:0002620!5.09e-08!23;CL:0000055!2.41e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:0002620;8.12e-12;23!CL:0002570;9.53e-12;8!CL:0000134;1.30e-08;55!CL:0000135;8.82e-08;3!CL:0000388;8.82e-08;3!CL:0000048;1.58e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0002570,4.22e-12,8;CL:0002620,6.88e-12,23;CL:0000135,8.62e-08,3;CL:0000388,8.62e-08,3;CL:0000057,1.06e-07,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!6.08e-07!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:17,8.58e-07,5;DOID:450,8.58e-07,5;DOID:66,8.58e-07,5;DOID:423,8.58e-07,5;DOID:0080000,8.58e-07,5;DOID:11722,8.58e-07,5 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;7.66e-10;14!UBERON:0007846;8.82e-08;3!UBERON:0000043;8.82e-08;3!UBERON:0007845;8.82e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001013,4.00e-10,14;UBERON:0002199,2.83e-08,46;UBERON:0002416,2.83e-08,46;UBERON:0007846,8.62e-08,3;UBERON:0000043,8.62e-08,3;UBERON:0007845,8.62e-08,3;UBERON:0002097,1.68e-07,41 | |||
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| ||
|short_description=p@chr19:56028989..56029016,+ | |||
}} | }} |
Latest revision as of 17:32, 27 July 2015
Short description: | p@chr19:56028989..56029016, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:56028989..56029016, + |
Coexpression cluster: | C1063_tenocyte_Mesenchymal_Fibroblast_Chondrocyte_mesenchymal_Olfactory_Smooth |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal stem cell of adipose | 4.22e-12 | 8 |
skin fibroblast | 6.88e-12 | 23 |
fibrocyte | 8.62e-08 | 3 |
tendon cell | 8.62e-08 | 3 |
fibroblast | 1.06e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
adipose tissue | 4.00e-10 | 14 |
integument | 2.83e-08 | 46 |
integumental system | 2.83e-08 | 46 |
dense regular connective tissue | 8.62e-08 | 3 |
tendon | 8.62e-08 | 3 |
regular connective tissue | 8.62e-08 | 3 |
skin of body | 1.68e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 8.58e-07 | 5 |
myotonic disease | 8.58e-07 | 5 |
muscle tissue disease | 8.58e-07 | 5 |
myopathy | 8.58e-07 | 5 |
muscular disease | 8.58e-07 | 5 |
myotonic dystrophy | 8.58e-07 | 5 |