FFCP PHASE1:Hg19::chr1:17303641..17303660,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:17303641..17303660,- to FFCP PHASE1:Hg19::chr1:17303641..17303660,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:17303641..17303660,- | |||
|coexpression_cluster_id=C315 | |||
|description=CAGE_peak_at_chr1:17303641..17303660,- | |||
|id=chr1:17303641..17303660,- | |||
|ontology_enrichment_celltype=CL:0000055!6.65e-19!180;CL:0002321!1.86e-12!248;CL:0000220!7.14e-12!246;CL:0000144!4.11e-11!625;CL:0002371!1.16e-09!591;CL:0000057!3.03e-09!75;CL:0000548!1.21e-08!679;CL:0000004!1.21e-08!679;CL:0000255!1.21e-08!679;CL:0000222!1.71e-08!119;CL:0000012!3.16e-08!682;CL:0000393!6.33e-08!60;CL:0000211!6.33e-08!60;CL:0000359!7.62e-08!32;CL:0000183!1.08e-07!59;CL:0000187!2.36e-07!54;CL:0000192!2.84e-07!42;CL:0000514!2.84e-07!42;CL:0000680!9.97e-07!57;CL:0000056!9.97e-07!57;CL:0000355!9.97e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0000349;2.33e-10;19!CL:0000359;4.35e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,3.81e-10,19;CL:0000136,1.33e-08,15;CL:0000359,4.91e-07,32 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!1.49e-11!84;UBERON:0002049!2.50e-11!79;UBERON:0007798!2.50e-11!79;UBERON:0001637!3.20e-11!42;UBERON:0003509!3.20e-11!42;UBERON:0004572!3.20e-11!42;UBERON:0000486!2.66e-10!82;UBERON:0000055!2.04e-09!69;UBERON:0004923!3.38e-09!57;UBERON:0001981!3.47e-09!60;UBERON:0007500!3.47e-09!60;UBERON:0004537!3.47e-09!60;UBERON:0006965!3.47e-09!60;UBERON:0004573!6.22e-09!33;UBERON:0004571!6.22e-09!33;UBERON:0000914!2.13e-08!83;UBERON:0002329!2.13e-08!83;UBERON:0003077!2.13e-08!83;UBERON:0003059!2.13e-08!83;UBERON:0007282!2.13e-08!83;UBERON:0009618!2.13e-08!83;UBERON:0007285!2.13e-08!83;UBERON:0004535!4.82e-08!110;UBERON:0004290!9.55e-08!70;UBERON:0001009!1.24e-07!113;UBERON:0005631!2.69e-07!14;UBERON:0000158!2.69e-07!14;UBERON:0003102!3.82e-07!95;UBERON:0005256!5.34e-07!143 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.72e-08;42!UBERON:0003509;1.72e-08;42!UBERON:0004572;1.72e-08;42!UBERON:0004573;3.39e-08;33!UBERON:0004571;3.39e-08;33!UBERON:0000478;1.48e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004872,1.92e-11,83;UBERON:0001637,1.15e-10,42;UBERON:0003509,1.15e-10,42;UBERON:0004572,1.15e-10,42;UBERON:0007500,1.33e-09,59;UBERON:0001981,1.33e-09,59;UBERON:0004537,1.33e-09,59;UBERON:0006965,1.33e-09,59;UBERON:0004573,3.59e-09,33;UBERON:0004571,3.59e-09,33;UBERON:0000055,3.31e-08,68;UBERON:0000478,2.14e-07,24;UBERON:0002049,5.61e-07,78;UBERON:0007798,5.61e-07,78 | |||
|phase1_expression=1.81678379270557,1.71280419112787,2.39622486963151,3.00219895059391,0.893922188854576,2.61701557230111,2.53299878168311,1.26343974685366,1.30592814099919,0,0,1.09220686065086,2.37390280405608,0.866364470720326,0.331397375727916,2.6893005858071,0.602694528023977,0.730310090387373,0,0.123121058076788,0,1.25381888591235,0,0,1.00434111675842,0,0,0,0,0,0.154816123316076,0.919421224478927,0.90361775633475,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0,0,0,2.50668955317945,0.289693037921647,6.36228757640879,0.486634870302636,0.472674085820339,0.665188192387692,1.14185221401064,0.130979075497713,0.364295288292542,0,0,0,0,0,0,0,0.39752481473341,0.860234595106124,0,0,2.51699661725944,1.37559020970034,0.835979866147242,0.775250277507987,1.06729878806013,0.33472061276467,2.81980521976403,0,2.92874469057803,1.10298924103761,0.81014194788176,0.267899184852239,0,0.112611480483322,0,0,0,0,0,0.872188104285069,1.49091585508596,3.41902381494365,0.132409180813219,10.0392817262085,2.83734705758686,1.68203280042692,0,8.38669664618344,0.311211035399766,0.538842688278752,0,0.756787138224657,0.576175924479999,0.70296429550139,0.624320153660641,0.570471821544449,0.298897361103602,0.117434498643765,0.161872944368132,0.280901613404497,0.61246251376468,0.122834317311768,0.929932030581889,2.37600571456411,3.21447008062124,0,0,0.168336113954066,0.250237039743928,0,0,0,0.45071417671979,0.340296549480063,0.358779271377724,0.85422955527427,0.423863802319124,0.300091096084402,0.618315175430633,0.515281080091258,1.48893485065272,0.168776332241266,0.779496041289589,0,1.01254888506529,2.10139873864455,0.355009592516614,0.604512589365842,0,0.966304265816484,0.272746120590835,0.286804595389004,1.09776335516636,1.19276791489337,1.16193942869518,1.96956004529204,0.504641701751257,0.36497735907583,0,1.92972281457866,4.14404764057442,1.39310378409594,0,0,0,0,0,0,0,0,0,0,1.4763109092493,1.40241773803446,0.4115740113314,2.94017422771084,0,0,0,0,0,0,0.98775256867763,0,0.201057944823262,0.462942225792648,0,0,0,0.231860809950154,0.70445216541493,0.433099343283221,0.462985512576611,0.570762456703795,0,0,0,0,0,0.93733833986777,0.671928512795438,0.425325291727159,0.0895585227028483,0,0.766765358330422,0,0,0.414656231081544,0,0.12624243342638,0.126995788584338,0.763976851116555,0,6.84289784090821,0.719792448923265,2.70308752059526,0.571652865261156,0,0,0,1.93907573636667,3.57656445851882,0.845302752556,3.72313363218819,1.04007436911366,0,0,0.266422179016099,0,4.34097284313154,0,0,0.355391948742546,0,3.01439377059586,2.61460037580088,3.29910870900788,0,0,0,1.19812427745791,2.29723871668228,0,0,0.205476322550383,0,0,0,0,0,0.254094624222463,0,0,0.335032530668698,0,0,0,0,0.12269149171914,0,0,0.207970861530807,1.78428988797162,0.315404830067869,0.234282829985426,3.31040709700491,45.481500811197,11.3820378421755,0.664225598535437,0.368738337083406,1.73767228936166,2.15381273209015,2.05886054286514,0,0,0,0.909382714338778,11.6504807657348,5.44302527993425,1.98486246255021,0.153461973288062,0.561320188866147,3.45975702990393,6.14048698880044,0.804269605718038,0,0.462629081407967,3.9063579568888,0.410635780069046,2.59627214591811,0.348631135379878,0.604297247958111,6.21570057940183,1.38121483403844,0,0.182091168006717,1.44236856455367,0.451199612907412,0.0770153371044148,1.56869953835371,0,0.211103257785751,0,0.510281115829547,0.647747748306418,12.3381802152231,0,0,0,0,1.11937377361089,0,0,0,0.328014645699706,0.325378394664303,0.103041011647722,0,0,0,0.650060246036521,1.6068392984416,4.35018232314549,0,0.15350367472613,0.137836572484531,0.429680979473094,0.145016693914229,0.340906509664404,0.534192213880424,3.96683796866347,1.15314040419064,0,1.11273558941105,0,1.5740617341532,1.3940745403212,0.924100740528266,1.06461206063404,0.869932992075073,2.22389062924704,1.5743737541619,0.372158369359667,0.632758849437452,0.571890581771475,0,0.42793898803392,0.318203247925937,2.35484592059769,0.179872457583315,0.274537029736055,0.117812402345686,1.2130948894399,1.58510321173008,2.10629228119491,0,3.1682753652067,1.05650146756755,0.136499911407986,0.565621727814851,3.39024349860728,1.10273068709225,0,0,0.578775534266688,0.655894752046633,0.405820753925408,0.30982349809975,1.69017361519345,0.286822704408103,0,0,0,2.53329162357197,1.64647446479951,0,0.699869440489966,0.769776901804097,0.670302275535787,0,0.282431402330337,1.29151611801369,0,1.33029046061003,0.229723400206959,0,0,0,0,0,0,0,0,0.427296284509893,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.23874448473769,7.42411702081597,0.307160702099232,0,0,1.33570446027487,0,0.211125408127993,0.398495976502139,0,0,0.306806047506464,0,2.79935628895627,0,0,0,0.0986434056369336,0,0,0,0,1.99613798001194,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0.538651809526579,0,0,0.98733408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| ||
|short_description=p@chr1:17303641..17303660,- | |||
}} | }} |
Latest revision as of 00:29, 28 July 2015
Short description: | p@chr1:17303641..17303660, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:17303641..17303660, - |
Coexpression cluster: | C315_Osteoblast_Preadipocyte_mesenchymal_Smooth_Cardiac_leiomyoma_Adipocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 3.81e-10 | 19 |
fat cell | 1.33e-08 | 15 |
vascular associated smooth muscle cell | 4.91e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
splanchnic layer of lateral plate mesoderm | 1.92e-11 | 83 |
artery | 1.15e-10 | 42 |
arterial blood vessel | 1.15e-10 | 42 |
arterial system | 1.15e-10 | 42 |
epithelial tube open at both ends | 1.33e-09 | 59 |
blood vessel | 1.33e-09 | 59 |
blood vasculature | 1.33e-09 | 59 |
vascular cord | 1.33e-09 | 59 |
systemic artery | 3.59e-09 | 33 |
systemic arterial system | 3.59e-09 | 33 |
vessel | 3.31e-08 | 68 |
extraembryonic structure | 2.14e-07 | 24 |
vasculature | 5.61e-07 | 78 |
vascular system | 5.61e-07 | 78 |