FFCP PHASE1:Hg19::chr1:22755393..22755415,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:22755393..22755415,+ to FFCP PHASE1:Hg19::chr1:22755393..22755415,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:22755393..22755415,+ | |||
|description=CAGE_peak_at_chr1:22755393..22755415,+ | |||
|id=chr1:22755393..22755415,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.56e-21!254;CL:0000548!4.27e-09!679;CL:0000004!4.27e-09!679;CL:0000255!4.27e-09!679;CL:0000012!8.96e-09!682;CL:0000039!2.39e-08!7;CL:0000586!2.39e-08!7;CL:0000063!7.55e-07!578 | |||
|ontology_enrichment_celltype_v019=CL:0000039;1.49e-27;7!CL:0000586;1.49e-27;7!CL:0002322;1.24e-19;5!CL:0002618;5.18e-12;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,2.42e-28,7;CL:0000586,2.42e-28,7;CL:0002322,5.85e-20,5;CL:0000066,1.96e-12,253;CL:0002618,9.80e-12,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!1.13e-30!239;DOID:162!3.33e-30!235;DOID:0050687!2.10e-25!143;DOID:305!2.48e-24!106;DOID:0050686!2.09e-11!137 | |||
|ontology_enrichment_disease_v019=DOID:3095;1.55e-10;22!DOID:2994;1.55e-10;22!DOID:1909;5.81e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,1.13e-20,143;DOID:14566,4.69e-16,239;DOID:305,2.45e-15,106;DOID:162,3.10e-14,235;DOID:3095,8.25e-11,22;DOID:2994,8.25e-11,22;DOID:1909,3.76e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.02e-08!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.16e-14;9!UBERON:0001557;1.16e-14;9!UBERON:0000473;5.98e-08;8!UBERON:0002066;2.20e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.07e-14,9;UBERON:0000473,2.83e-08,8;UBERON:0002066,3.19e-07,5 | |||
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| ||
|short_description=p@chr1:22755393..22755415,+ | |||
}} | }} |
Latest revision as of 04:39, 28 July 2015
Short description: | p@chr1:22755393..22755415, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:22755393..22755415, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 2.42e-28 | 7 |
germ cell | 2.42e-28 | 7 |
embryonic stem cell | 5.85e-20 | 5 |
epithelial cell | 1.96e-12 | 253 |
endothelial cell of umbilical vein | 9.80e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
larynx | 2.07e-14 | 9 |
testis | 2.83e-08 | 8 |
umbilical vein | 3.19e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 1.13e-20 | 143 |
disease of cellular proliferation | 4.69e-16 | 239 |
carcinoma | 2.45e-15 | 106 |
cancer | 3.10e-14 | 235 |
germ cell and embryonal cancer | 8.25e-11 | 22 |
germ cell cancer | 8.25e-11 | 22 |
melanoma | 3.76e-09 | 2 |