FFCP PHASE1:Hg19::chr20:48807779..48807802,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr20:48807779..48807802,+ to FFCP PHASE1:Hg19::chr20:48807779..48807802,+: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1051 | |EntrezGene=1051 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1834 | |HGNC=1834 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=403bp_to_uc002xvh.2_5end | |||
|cluster_id=chr20:48807779..48807802,+ | |||
|description=CAGE_peak_10_at_CEBPB_5end | |||
|id=chr20:48807779..48807802,+ | |||
|ontology_enrichment_celltype=CL:0002057!3.01e-17!42;CL:0000860!3.96e-16!45;CL:0000766!4.13e-11!76;CL:0002194!4.19e-10!63;CL:0000576!4.19e-10!63;CL:0000040!4.19e-10!63;CL:0000559!4.19e-10!63;CL:0002009!5.49e-09!65;CL:0000839!1.97e-08!70;CL:0000557!1.41e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.06e-12;33!CL:0002057;8.06e-12;33!CL:0000576;7.78e-10;48!CL:0000473;2.49e-09;39!CL:0000234;2.49e-09;39!CL:0000766;1.70e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.38e-20,42;CL:0002057,5.38e-20,42;CL:0000473,4.31e-18,48;CL:0000234,4.31e-18,48;CL:0000766,2.96e-14,72;CL:0002194,4.71e-13,59;CL:0000576,4.71e-13,59;CL:0000040,4.71e-13,59;CL:0000559,4.71e-13,59;CL:0002009,3.56e-12,61;CL:0000839,3.01e-10,66;CL:0000557,6.66e-10,67;CL:0002393,3.29e-08,9;CL:0002397,3.29e-08,9 | |||
|ontology_enrichment_development_v019=CL:0002057;5.82e-15;42 | |||
|ontology_enrichment_disease=DOID:0050687!6.24e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004765,4.58e-08,90;UBERON:0002371,7.31e-08,76;UBERON:0001474,1.14e-07,82 | |||
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| ||
|short_description=p10@CEBPB | |||
}} | }} |
Latest revision as of 20:56, 16 September 2015
Short description: | p10@CEBPB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_CEBPB_5end |
Coexpression cluster: | NA |
Association with transcript: | 403bp_to_uc002xvh.2_5end |
EntrezGene: | CEBPB |
HGNC: | 1834 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.38e-20 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.38e-20 | 42 |
defensive cell | 4.31e-18 | 48 |
phagocyte | 4.31e-18 | 48 |
myeloid leukocyte | 2.96e-14 | 72 |
monopoietic cell | 4.71e-13 | 59 |
monocyte | 4.71e-13 | 59 |
monoblast | 4.71e-13 | 59 |
promonocyte | 4.71e-13 | 59 |
macrophage dendritic cell progenitor | 3.56e-12 | 61 |
myeloid lineage restricted progenitor cell | 3.01e-10 | 66 |
granulocyte monocyte progenitor cell | 6.66e-10 | 67 |
intermediate monocyte | 3.29e-08 | 9 |
CD14-positive, CD16-positive monocyte | 3.29e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
skeletal element | 4.58e-08 | 90 |
bone marrow | 7.31e-08 | 76 |
bone element | 1.14e-07 | 82 |