FFCP PHASE1:Hg19::chr20:62791809..62791857,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr20:62791809..62791857,+ | |||
|coexpression_cluster_id=C171 | |||
|description=CAGE_peak_at_chr20:62791809..62791857,+ | |||
|id=chr20:62791809..62791857,+ | |||
|ontology_enrichment_celltype=CL:0002322!2.23e-15!5;CL:0002319!3.51e-13!25;CL:0000242!2.57e-11!2;CL:0000095!8.33e-09!17;CL:0000123!8.33e-09!17;CL:0000133!1.53e-07!59;CL:0002605!2.80e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000123;2.55e-45;2!CL:0000242;2.55e-45;2!CL:0002553;4.10e-23;1!CL:0000312;7.92e-19;5!CL:0000240;7.23e-16;6!CL:0000311;7.23e-16;6!CL:0000079;7.23e-16;6!CL:0000237;7.23e-16;6!CL:0000047;2.90e-12;2!CL:0000362;6.54e-11;9!CL:0002319;4.76e-08;25!CL:0002159;2.44e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,2.55e-45,2;CL:0002553,4.10e-23,1;CL:0000312,7.92e-19,5;CL:0000240,7.23e-16,6;CL:0000311,7.23e-16,6;CL:0000079,7.23e-16,6;CL:0000237,7.23e-16,6;CL:0000036,7.23e-16,6;CL:0000357,7.23e-16,6;CL:0000114,7.23e-16,6;CL:0000362,6.54e-11,9;CL:0002319,4.88e-08,25;CL:0002159,2.44e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000357;7.23e-16;6!CL:0000114;7.23e-16;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1324;8.83e-07;15!DOID:5409;9.10e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,8.14e-07,4;DOID:1324,8.33e-07,15 | |||
|ontology_enrichment_uberon=UBERON:0001017!5.94e-37!82;UBERON:0005743!5.51e-35!86;UBERON:0001049!3.84e-33!57;UBERON:0005068!3.84e-33!57;UBERON:0006241!3.84e-33!57;UBERON:0007135!3.84e-33!57;UBERON:0000955!9.22e-32!69;UBERON:0006238!9.22e-32!69;UBERON:0000073!3.75e-31!94;UBERON:0001016!3.75e-31!94;UBERON:0001893!4.31e-30!34;UBERON:0002616!9.67e-29!59;UBERON:0001869!3.36e-28!32;UBERON:0002780!9.40e-28!41;UBERON:0001890!9.40e-28!41;UBERON:0006240!9.40e-28!41;UBERON:0000956!2.33e-27!25;UBERON:0000203!2.33e-27!25;UBERON:0002791!3.47e-27!33;UBERON:0003080!5.11e-27!42;UBERON:0002020!1.73e-26!34;UBERON:0003528!1.73e-26!34;UBERON:0003075!1.22e-22!86;UBERON:0007284!1.22e-22!86;UBERON:0002619!3.84e-22!22;UBERON:0002346!2.05e-21!90;UBERON:0001950!3.53e-20!20;UBERON:0003056!5.57e-20!61;UBERON:0004121!8.92e-18!169;UBERON:0000033!2.77e-17!123;UBERON:0000924!3.20e-17!173;UBERON:0006601!3.20e-17!173;UBERON:0000153!3.11e-16!129;UBERON:0007811!3.11e-16!129;UBERON:0001872!4.69e-15!5;UBERON:0007023!1.40e-12!115;UBERON:0000200!2.63e-12!6;UBERON:0000025!3.25e-08!194;UBERON:0003076!2.08e-07!15;UBERON:0003057!2.08e-07!15;UBERON:0000988!4.62e-07!3;UBERON:0002771!4.62e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001003;6.59e-07;15!UBERON:0007376;6.59e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001003,6.59e-07,15;UBERON:0007376,6.59e-07,15;UBERON:0007383,6.59e-07,15 | |||
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|short_description=p@chr20:62791809..62791857,+ | |||
}} | }} |
Latest revision as of 16:31, 28 July 2015
Short description: | p@chr20:62791809..62791857, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:62791809..62791857, + |
Coexpression cluster: | C171_merkel_neuroblastoma_pineal_retinoblastoma_carcinoid_small_eye |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 2.55e-45 | 2 |
lung fibroblast | 4.10e-23 | 1 |
keratinocyte | 7.92e-19 | 5 |
stratified squamous epithelial cell | 7.23e-16 | 6 |
keratin accumulating cell | 7.23e-16 | 6 |
stratified epithelial cell | 7.23e-16 | 6 |
keratinizing barrier epithelial cell | 7.23e-16 | 6 |
epithelial fate stem cell | 7.23e-16 | 6 |
stratified epithelial stem cell | 7.23e-16 | 6 |
surface ectodermal cell | 7.23e-16 | 6 |
epidermal cell | 6.54e-11 | 9 |
neural cell | 4.88e-08 | 25 |
general ecto-epithelial cell | 2.44e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
skin epidermis | 6.59e-07 | 15 |
outer epithelium | 6.59e-07 | 15 |
enveloping layer of ectoderm | 6.59e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 8.14e-07 | 4 |
lung cancer | 8.33e-07 | 15 |