FFCP PHASE1:Hg19::chr2:209118974..209118991,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:209118974..209118991,- to FFCP PHASE1:Hg19::chr2:209118974..209118991,-: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3417 | |EntrezGene=3417 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5382 | |HGNC=5382 | ||
|TSSclassifier=strong | |||
|UniProt=O75874 | |UniProt=O75874 | ||
|association_with_transcript=54bp_to_ENST00000415913_5end | |||
|cluster_id=chr2:209118974..209118991,- | |||
|coexpression_cluster_id=C4177 | |||
|description=CAGE_peak_7_at_IDH1_5end | |||
|id=chr2:209118974..209118991,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002322;1.06e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.56e-08,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!1.87e-25!239;DOID:162!5.19e-24!235;DOID:0050687!2.76e-19!143;DOID:305!1.24e-16!106;DOID:0050686!2.91e-09!137;DOID:8692!7.26e-08!31 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,4.87e-13,239;DOID:162,6.70e-12,235;DOID:0050687,1.54e-09,143;DOID:305,4.57e-08,106;DOID:0050686,2.92e-07,137 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0.642301571672949,0.422863212287913,1.0007329835313,1.34088328328186,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0.136874425072884,0,0.0764134057479513,0.0821005894499457,0,0,0,0,0,0,0.369754010166788,0,0,0.293600439334847,0,0,0,0.671746422719773,0.647787332037959,0,0,0,0,0,0,0,0,0.512321413058201,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0.790152254325231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0,0,0,0.869079113764942,0,0,0.0945348171640679,0,0.087834785693126,0.0654895377488563,0,0,0.97364218096405,1.0447784237956,0.398873881556595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0.225222960966644,0,0,0.183201743930407,0,0,0,0.496971951695318,0.506522046658319,0.397227542439656,1.14734648299525,0.354668382198357,0,0,0.24666754841716,0.311211035399766,1.21239604862719,0.163461903113459,0.151357427644931,0,1.87457145467037,0,0,0,0.23486899728753,0.323745888736263,0,0,0.122834317311768,0.516628905878827,0,0.247266929278557,0,0,0,0,0,0,0.30648779579902,0,0,0,0.640672166455702,0,0,0.103052529238439,0.257640540045629,0.18611685633159,0.337552664482532,0.194874010322397,0.252433774244115,0.0920498986422993,0.161646056818812,0.355009592516614,0.10075209822764,0,0,0,0.286804595389004,1.34171076742555,0.530119073285941,1.16193942869518,1.24393266018445,2.01856680700503,0.36497735907583,0,0,0,0,0,0.236613600079688,0.674338760312407,0.482022059766964,0,0.871517776369625,0,0.134831308160164,0,0.38474715694639,0,0,0,0,0,0,0,0,0.491953754172454,0,0,0,0,0,1.95484983186195,0,0,0.115930404975077,0.352226082707465,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0.880484340132261,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0.646358578788889,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0.099972991182057,0,0,0,0,1.14861935834114,0,0.144781306667579,0,0,0,0,0,0.256686072559497,0.254094624222463,0,0,0,0,0,0,0,0.24538298343828,0.500170521059677,1.35632511849868,0.207970861530807,0,0.157702415033935,0.117141414992713,0.300946099727719,0,1.03473071292505,0,0,0.173767228936166,0,0,0,0.215714200818617,0,0,1.66435439510497,0,0.248107807818777,0.153461973288062,0.561320188866147,0.128139149255701,0.511707249066704,0,1.48418066444991,0,0,0.164254312027618,0.519254429183621,0,0.604297247958111,0,3.59115856849996,0.803701137152247,0.182091168006717,0.262248829918848,0,0.0770153371044148,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,2.27764876265012,0.618246069886334,0.0915694648183434,0.082509499920588,0,0,0,0.48335359146061,0.462145851343933,0.307007349452259,0.137836572484531,0.322260734604821,0.290033387828457,0,0.267096106940212,1.32227932288782,0.768760269460425,0,1.31505115112215,0,0.62962469366128,0,0,0,0,0,0.286249773483982,0.372158369359667,0,0,0,0.855877976067841,0,0,0,0,0.235624804691373,0,0,0,0,0.243713489631284,1.05650146756755,0.9554993798559,0.707027159768564,0,0,0,0,0.578775534266688,0,0.202910376962704,0,0,0.430234056612155,0.0982490410131212,0,0.354761064070598,0.422215270595328,0,0.379473173765715,0,0.384888450902048,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0.854592569019785,0.962479855263359,0.245040215981032,0,0,0.0711418433484141,0,0.199579371432817,0.383010740264733,2.54008299268659,0.324621940274555,1.40398589056729,0.228234679033192,0.313359791546046,0,0.169291777801603,0,0,0.425846237690326,0,0.614481528616916,0.671028323677248,0.166849141711909,0.976940477010201,1.11362469558097,1.23087398947712,0.811367035427949,0,1.4098700508785,0,0.146508179271894,0,0.111443384277478,0,0,0,0,0,0,0.222617410045812,0,0.211125408127993,0,0,0.251932747854276,0.20453736500431,0,0.311039587661807,0.0898683511473268,5.37063524026827,1.02314474045374,0.295930216910801,0,0,0,0,0,0.260427761085233,0,0,0.682760689712998,0,0.236387681767936,0.689486746482929,0,0.347249989866585,0,0,0,0,0,0,3.15921544205071,1.25481369850743,0,0.341826167541004,0,0.269272933229316,0.651884231532048,0,0,0,0,0.31396051279005,0.997270091400938,1.35357396370308,0.980312671588698,0.503464760927528,0,0.953619473882272,0,0.652931232636591,1.69623685720729,2.380275037163,0,0,0,0.296521128680622,0.123563938946503,0,0,0.802577647298789,0,0,0.586993856796269,0.971121518136371,0,0,0,0,0.150323419414493,0.72581733978073,0.664653872707185,0,0.627865836814451,0,1.42304773014896,1.10939738410511,0,0.195984794828755,0.0870592065804026,0.17472666824203,0.343972064943233,0.387025325156341,0.438535902517113,0.246346371159628,0,2.38291542067051,0,0.274083849293502,0.397429223405979,0,0.195551382734803,0.561111741760736,0,0.799238438328521,2.4495370916198,0.80175617316141,0.857974989309823,2.3048767678104,1.11827282008889,0.471388069233591,0,0,0.509991088181609,1.15580235960608,0.600420288709789,0.136905378891993,0,0,0,0.279282401272254,0.458320848023367,0,0.399358000997982,0,0.223171457441873,0.335917362433631,0,1.16495949527454,0.315132729228895,0.329663433524666,0.539228350833479,3.24810688998671,0.677386656526276,0,0,0.964518890790115,1.10031549277787,0.83088067605837,0,0,0,0,0.0788057072991982,0.209818352539992,0,4.30289614398828,0.383830394638891,0,0,0,1.08599920350743,2.5926644736038,0,0,2.21649806023215,0.340776043570843,0.339936274560377,0,0,0,0,7.01456035325751,0,0,0,0,0,0,0,1.91502377331055,0,1.0027595760908,1.53172788381731,0.983617892129413,1.72759505875258,0.886068179966986,0,0,0.573409195690071,0.110929051536852,0,2.21357815897969,0,1.21319294033318,0.856396000634902,0.470531639396343,0,0,0,0.467426619694449,0.554805861502613,0,0,0,5.94984177832001,0.302461847526478,0,0,0,1.34940933649081,0,0,0.265841714557995,0,0,1.52322084867518,0,0,0.537052785212442,0,0.398095888698616,0,1.71697852591396,0.673498977531838,0,0,0.643324774124777,0.521988583930423,0.226705925512272,0,0,0,0.308801447160972,0.877136198314828,0,0,0.506827321959218,1.28120759293973,0.345430341731199,0,0,0,0,0,2.6208787907713,0,0.845248493434508,0,0.213383459388282,0.172214979660816,0,0,2.79759015438889,0,1.02315497042921,0,0.629063767423586,0.109209638192014,0.33946505990805,0,0,0,0,0.867479195013787,0.80057074828547,0.705351887381368,0.3062454773532,0.0642292250964595,0,0,0,0.252071696221718,0,0,1.42769420259154,2.35554524402461,1.88751557356385,0.183428598521679,0.115525666150338,0.762764190934334,0.690359926060101,0,0.0752103283492573,0,0.781514011233092,0,0,0.147856086217045,0,0,0,0,0,0,0.992422356778588,0,0.894336993477167,0,0,0,0,0,0.115233987555779,0.171488009437418,0,0.0657727735628491,0.354581522651905,0.222462803784138,0.39246546425257,0,0.280272163313789,0,0,1.43325506366115,0.214429632529969,0,0,0.173858272302579,0.801711364730253,0.207216164163037,0.17071847709395,0,0,0.709992004383392,0.340853619036631,0,0,0,0,0.223710863595585,0.883352102537187,0.609589624911347,0,0,0,0.971421986118279,0,0.198950775161368,0,2.59775988689608,0.109940516745429,0.754814217833368,0,0,1.41095188908457,0,5.4205605833374,0,0,0,0.169927114687817,0.0939839179798536,0.128915775947154,0,0.71421575442263,0,0.722172300202514,0,0.458729283404541,0.143339583151451,0,0.0679914901909147,0,0,0,0,0,0.756998549010474,2.18531143927391,0.126698501011437,1.32585478664576,7.21486994217013,4.41095517767256,0.752122617877125,0.151557396436479,0,0,0,0,0.714193294391221,0.0645889098360061,0.124149428591716,0.560659312903067,0,0,0,0,0.0673520530145875,0,0,0.244209805832924,3.30854772220918,0,2.96423166951737,0,0.244482888365733,0,0.665756774185513,0,0 | |phase1_expression=0,0.642301571672949,0.422863212287913,1.0007329835313,1.34088328328186,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0.136874425072884,0,0.0764134057479513,0.0821005894499457,0,0,0,0,0,0,0.369754010166788,0,0,0.293600439334847,0,0,0,0.671746422719773,0.647787332037959,0,0,0,0,0,0,0,0,0.512321413058201,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0.790152254325231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0,0,0,0.869079113764942,0,0,0.0945348171640679,0,0.087834785693126,0.0654895377488563,0,0,0.97364218096405,1.0447784237956,0.398873881556595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0.225222960966644,0,0,0.183201743930407,0,0,0,0.496971951695318,0.506522046658319,0.397227542439656,1.14734648299525,0.354668382198357,0,0,0.24666754841716,0.311211035399766,1.21239604862719,0.163461903113459,0.151357427644931,0,1.87457145467037,0,0,0,0.23486899728753,0.323745888736263,0,0,0.122834317311768,0.516628905878827,0,0.247266929278557,0,0,0,0,0,0,0.30648779579902,0,0,0,0.640672166455702,0,0,0.103052529238439,0.257640540045629,0.18611685633159,0.337552664482532,0.194874010322397,0.252433774244115,0.0920498986422993,0.161646056818812,0.355009592516614,0.10075209822764,0,0,0,0.286804595389004,1.34171076742555,0.530119073285941,1.16193942869518,1.24393266018445,2.01856680700503,0.36497735907583,0,0,0,0,0,0.236613600079688,0.674338760312407,0.482022059766964,0,0.871517776369625,0,0.134831308160164,0,0.38474715694639,0,0,0,0,0,0,0,0,0.491953754172454,0,0,0,0,0,1.95484983186195,0,0,0.115930404975077,0.352226082707465,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0.880484340132261,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0.646358578788889,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0.099972991182057,0,0,0,0,1.14861935834114,0,0.144781306667579,0,0,0,0,0,0.256686072559497,0.254094624222463,0,0,0,0,0,0,0,0.24538298343828,0.500170521059677,1.35632511849868,0.207970861530807,0,0.157702415033935,0.117141414992713,0.300946099727719,0,1.03473071292505,0,0,0.173767228936166,0,0,0,0.215714200818617,0,0,1.66435439510497,0,0.248107807818777,0.153461973288062,0.561320188866147,0.128139149255701,0.511707249066704,0,1.48418066444991,0,0,0.164254312027618,0.519254429183621,0,0.604297247958111,0,3.59115856849996,0.803701137152247,0.182091168006717,0.262248829918848,0,0.0770153371044148,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,2.27764876265012,0.618246069886334,0.0915694648183434,0.082509499920588,0,0,0,0.48335359146061,0.462145851343933,0.307007349452259,0.137836572484531,0.322260734604821,0.290033387828457,0,0.267096106940212,1.32227932288782,0.768760269460425,0,1.31505115112215,0,0.62962469366128,0,0,0,0,0,0.286249773483982,0.372158369359667,0,0,0,0.855877976067841,0,0,0,0,0.235624804691373,0,0,0,0,0.243713489631284,1.05650146756755,0.9554993798559,0.707027159768564,0,0,0,0,0.578775534266688,0,0.202910376962704,0,0,0.430234056612155,0.0982490410131212,0,0.354761064070598,0.422215270595328,0,0.379473173765715,0,0.384888450902048,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0.854592569019785,0.962479855263359,0.245040215981032,0,0,0.0711418433484141,0,0.199579371432817,0.383010740264733,2.54008299268659,0.324621940274555,1.40398589056729,0.228234679033192,0.313359791546046,0,0.169291777801603,0,0,0.425846237690326,0,0.614481528616916,0.671028323677248,0.166849141711909,0.976940477010201,1.11362469558097,1.23087398947712,0.811367035427949,0,1.4098700508785,0,0.146508179271894,0,0.111443384277478,0,0,0,0,0,0,0.222617410045812,0,0.211125408127993,0,0,0.251932747854276,0.20453736500431,0,0.311039587661807,0.0898683511473268,5.37063524026827,1.02314474045374,0.295930216910801,0,0,0,0,0,0.260427761085233,0,0,0.682760689712998,0,0.236387681767936,0.689486746482929,0,0.347249989866585,0,0,0,0,0,0,3.15921544205071,1.25481369850743,0,0.341826167541004,0,0.269272933229316,0.651884231532048,0,0,0,0,0.31396051279005,0.997270091400938,1.35357396370308,0.980312671588698,0.503464760927528,0,0.953619473882272,0,0.652931232636591,1.69623685720729,2.380275037163,0,0,0,0.296521128680622,0.123563938946503,0,0,0.802577647298789,0,0,0.586993856796269,0.971121518136371,0,0,0,0,0.150323419414493,0.72581733978073,0.664653872707185,0,0.627865836814451,0,1.42304773014896,1.10939738410511,0,0.195984794828755,0.0870592065804026,0.17472666824203,0.343972064943233,0.387025325156341,0.438535902517113,0.246346371159628,0,2.38291542067051,0,0.274083849293502,0.397429223405979,0,0.195551382734803,0.561111741760736,0,0.799238438328521,2.4495370916198,0.80175617316141,0.857974989309823,2.3048767678104,1.11827282008889,0.471388069233591,0,0,0.509991088181609,1.15580235960608,0.600420288709789,0.136905378891993,0,0,0,0.279282401272254,0.458320848023367,0,0.399358000997982,0,0.223171457441873,0.335917362433631,0,1.16495949527454,0.315132729228895,0.329663433524666,0.539228350833479,3.24810688998671,0.677386656526276,0,0,0.964518890790115,1.10031549277787,0.83088067605837,0,0,0,0,0.0788057072991982,0.209818352539992,0,4.30289614398828,0.383830394638891,0,0,0,1.08599920350743,2.5926644736038,0,0,2.21649806023215,0.340776043570843,0.339936274560377,0,0,0,0,7.01456035325751,0,0,0,0,0,0,0,1.91502377331055,0,1.0027595760908,1.53172788381731,0.983617892129413,1.72759505875258,0.886068179966986,0,0,0.573409195690071,0.110929051536852,0,2.21357815897969,0,1.21319294033318,0.856396000634902,0.470531639396343,0,0,0,0.467426619694449,0.554805861502613,0,0,0,5.94984177832001,0.302461847526478,0,0,0,1.34940933649081,0,0,0.265841714557995,0,0,1.52322084867518,0,0,0.537052785212442,0,0.398095888698616,0,1.71697852591396,0.673498977531838,0,0,0.643324774124777,0.521988583930423,0.226705925512272,0,0,0,0.308801447160972,0.877136198314828,0,0,0.506827321959218,1.28120759293973,0.345430341731199,0,0,0,0,0,2.6208787907713,0,0.845248493434508,0,0.213383459388282,0.172214979660816,0,0,2.79759015438889,0,1.02315497042921,0,0.629063767423586,0.109209638192014,0.33946505990805,0,0,0,0,0.867479195013787,0.80057074828547,0.705351887381368,0.3062454773532,0.0642292250964595,0,0,0,0.252071696221718,0,0,1.42769420259154,2.35554524402461,1.88751557356385,0.183428598521679,0.115525666150338,0.762764190934334,0.690359926060101,0,0.0752103283492573,0,0.781514011233092,0,0,0.147856086217045,0,0,0,0,0,0,0.992422356778588,0,0.894336993477167,0,0,0,0,0,0.115233987555779,0.171488009437418,0,0.0657727735628491,0.354581522651905,0.222462803784138,0.39246546425257,0,0.280272163313789,0,0,1.43325506366115,0.214429632529969,0,0,0.173858272302579,0.801711364730253,0.207216164163037,0.17071847709395,0,0,0.709992004383392,0.340853619036631,0,0,0,0,0.223710863595585,0.883352102537187,0.609589624911347,0,0,0,0.971421986118279,0,0.198950775161368,0,2.59775988689608,0.109940516745429,0.754814217833368,0,0,1.41095188908457,0,5.4205605833374,0,0,0,0.169927114687817,0.0939839179798536,0.128915775947154,0,0.71421575442263,0,0.722172300202514,0,0.458729283404541,0.143339583151451,0,0.0679914901909147,0,0,0,0,0,0.756998549010474,2.18531143927391,0.126698501011437,1.32585478664576,7.21486994217013,4.41095517767256,0.752122617877125,0.151557396436479,0,0,0,0,0.714193294391221,0.0645889098360061,0.124149428591716,0.560659312903067,0,0,0,0,0.0673520530145875,0,0,0.244209805832924,3.30854772220918,0,2.96423166951737,0,0.244482888365733,0,0.665756774185513,0,0 | ||
|short_description=p7@IDH1 | |||
}} | }} |
Latest revision as of 20:17, 19 September 2015
Short description: | p7@IDH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_IDH1_5end |
Coexpression cluster: | C4177_lung_bile_mesenchymal_somatostatinoma_testicular_hepatoma_large |
Association with transcript: | 54bp_to_ENST00000415913_5end |
EntrezGene: | IDH1 |
HGNC: | 5382 |
UniProt: | O75874 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.56e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 4.87e-13 | 239 |
cancer | 6.70e-12 | 235 |
cell type cancer | 1.54e-09 | 143 |
carcinoma | 4.57e-08 | 106 |
organ system cancer | 2.92e-07 | 137 |