FFCP PHASE1:Hg19::chr2:37544209..37544230,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23683 | |EntrezGene=23683 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9408 | |HGNC=9408 | ||
|TSSclassifier=strong | |||
|UniProt=O94806 | |UniProt=O94806 | ||
|association_with_transcript=0bp_to_ENST00000234179,NM_005813,uc002rqd.2,uc002rqf.1_5end | |||
|cluster_id=chr2:37544209..37544230,- | |||
|description=CAGE_peak_13_at_PRKD3_5end | |||
|id=chr2:37544209..37544230,- | |||
|ontology_enrichment_celltype=CL:0000148!5.95e-07!10;CL:0000541!5.95e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0002567;1.53e-44;3!CL:0000148;3.47e-14;10!CL:0000147;1.99e-10;14!CL:0000710;1.38e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,1.22e-44,3;CL:0000148,3.25e-14,10;CL:0000541,3.25e-14,10;CL:0000147,1.90e-10,14;CL:0000710,1.33e-07,20 | |||
|ontology_enrichment_development_v019=UBERON:0007297;1.07e-17;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1909;5.96e-18;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,5.48e-18,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001301;7.05e-34;1!UBERON:0003135;4.95e-13;11!UBERON:0002106;2.89e-12;3!UBERON:0006947;2.89e-12;3!UBERON:0004054;2.89e-12;3!UBERON:0005904;1.57e-09;4!UBERON:0004177;7.01e-08;5!UBERON:0005057;7.01e-08;5!UBERON:0003101;5.32e-07;22!UBERON:0000079;5.32e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,9.85e-34,1;UBERON:0003135,5.42e-13,11;UBERON:0002106,2.89e-12,3;UBERON:0004854,2.89e-12,3;UBERON:0009034,2.89e-12,3;UBERON:0002095,2.89e-12,3;UBERON:0004782,2.89e-12,3;UBERON:0003281,2.89e-12,3;UBERON:0009664,2.89e-12,3;UBERON:0002296,2.89e-12,3;UBERON:0005602,2.89e-12,3;UBERON:0001179,2.89e-12,3;UBERON:0006293,2.89e-12,3;UBERON:0006947,3.24e-12,3;UBERON:0004054,3.24e-12,3;UBERON:0003887,6.34e-12,12;UBERON:0005904,1.70e-09,4;UBERON:0003101,5.57e-07,22;UBERON:0000079,5.57e-07,22 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0.281908808191942,0,0,0,0,0.631719873426831,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447830948479849,0,0,0.290796477559129,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0.188242339542605,0.272906150057846,0,0.612167784741805,0,0,0,0,0,0.580418477257168,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0.853460445133014,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0.167186495390678,0,0,0,0.111410456885174,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.144846518960824,0,0,0,0,0,0.0654895377488563,0,0,0,0.348259474598534,0.132957960518865,0,0,0,0,0,0,0,0.419499436209906,0.275118041940067,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206651562351531,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0.211931901159562,0,0.103052529238439,0,0.18611685633159,0,0,0,0.0920498986422993,0,0,0.10075209822764,0,0.193260853163297,0,0,0,0,0,0.10366105501537,0.252320850875628,0,0,0.643240938192885,0,0,0,0.118306800039844,0,0,0,0,0.237270619111097,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0.100528972411631,0.0925884451585296,0,0,0,0,0.117408694235822,0,0,0,0,0,0.246217006087397,0,0.148631162288728,0,0,0,0,0,0,0,0.176096868026452,0.414656231081544,0.864719720501769,0.25248486685276,0.190493682876507,1.90994212779139,3.51652341630141,0,0.102827492703324,0.300343057843917,0.571652865261156,0,0,0,0.129271715757778,0,0.845302752556,0,0,0,0,0.266422179016099,0.285955987316295,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0.224170287987055,0,0,0.128343036279748,0.254094624222463,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0.117141414992713,0.300946099727719,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0.30239029332968,0.248107807818777,0,0.280660094433074,0.128139149255701,0,0.160853921143607,0,0,0,0.164254312027618,0,0,0.483437798366489,0,0.184161977871793,0.114814448164607,0,0.131124414959424,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0.082509499920588,0,0,0,0.193341436584244,0,0,0,0,0,0,0.267096106940212,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0.211107635297664,0,0,0.349934720244983,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0.439524537815682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0.394573622547734,0,0,0,0,0,0,0,0,0,0,0,0,0,0.520874984799877,0,0,0,0.110579259931225,0,0,0,0.278847488557207,0.615602068030377,0,0,0.179515288819544,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0,0,0.123563938946503,0,0.067401132980677,0,0,0,0,0,0,0,0,0.063186579628488,0.60129367765797,0.207376382794494,0,0,0,0,0,0,0,0,0,1.04836000945218,0,0,0.146178634172371,0,0.193978032976839,0,0.225980740780532,0.137041924646751,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0.407712618220842,0,0.101998217636322,0,0,0,0,0,0,0,0.458320848023367,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.136203406111576,0.160753148465019,0.137539436597234,0,0,0,0.0607495566580247,0,0.157611414598396,0,0,0,0,0,0.662091970365432,0.25426853765475,0,0,0,0,0,0.170388021785422,0,0.58620893471233,0,0,0,0,0,0.961086713109252,0.157204305099666,0,0.496166021811951,0,0,0,0,0,0,0,0.157054096250234,0,0.122026264901963,0.1251909307065,0,0,0.0620964029413835,0.138348634936231,0,0.909894705249887,4.56744533671948,0,0,0,0,0,0,0,0,0,0.228840068396924,0.151230923763239,0,0.147855149989634,0,0,0.155262956876259,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0.327609848846413,0.245772908753719,0,0,0,0,0,0,0,0,0.127894371303652,0,0.157265941855896,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0.504143392443436,0,0,0,0.0981477185010256,0,0.183428598521679,0,0,0,0.198916222116275,0.601682626794058,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0.227662191351298,0.177404740325278,0,0,0,0,0,0.111231401892069,0.313972371402056,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0.3414369541879,0,0,0.118332000730565,0,0,0,0.31020638566432,0,0,0,0,0,0.410651227424988,0,0.485710993059139,0,0.198950775161368,0,0.11294608203896,0,0,0.154348316215889,0,0,0,0,0,0,0,0,1.12780701575824,0,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380095503034311,0.101988829741982,0,0.18378979906969,0.250707539292375,4.16782840200317,0.267964130156178,0,0,0,0,0.581300188524055,0.31037357147929,0,0.190941474834495,0,0,0,0,0.143444410785353,0,0.0814032686109745,0,0,0,0,0,0,0.665756774185513,0,0 | |phase1_expression=0.363356758541113,0.214100523890983,0.281908808191942,0,0,0,0,0.631719873426831,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447830948479849,0,0,0.290796477559129,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0.188242339542605,0.272906150057846,0,0.612167784741805,0,0,0,0,0,0.580418477257168,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0.853460445133014,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0.167186495390678,0,0,0,0.111410456885174,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.144846518960824,0,0,0,0,0,0.0654895377488563,0,0,0,0.348259474598534,0.132957960518865,0,0,0,0,0,0,0,0.419499436209906,0.275118041940067,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206651562351531,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0.211931901159562,0,0.103052529238439,0,0.18611685633159,0,0,0,0.0920498986422993,0,0,0.10075209822764,0,0.193260853163297,0,0,0,0,0,0.10366105501537,0.252320850875628,0,0,0.643240938192885,0,0,0,0.118306800039844,0,0,0,0,0.237270619111097,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0.100528972411631,0.0925884451585296,0,0,0,0,0.117408694235822,0,0,0,0,0,0.246217006087397,0,0.148631162288728,0,0,0,0,0,0,0,0.176096868026452,0.414656231081544,0.864719720501769,0.25248486685276,0.190493682876507,1.90994212779139,3.51652341630141,0,0.102827492703324,0.300343057843917,0.571652865261156,0,0,0,0.129271715757778,0,0.845302752556,0,0,0,0,0.266422179016099,0.285955987316295,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0.224170287987055,0,0,0.128343036279748,0.254094624222463,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0.117141414992713,0.300946099727719,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0.30239029332968,0.248107807818777,0,0.280660094433074,0.128139149255701,0,0.160853921143607,0,0,0,0.164254312027618,0,0,0.483437798366489,0,0.184161977871793,0.114814448164607,0,0.131124414959424,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0.082509499920588,0,0,0,0.193341436584244,0,0,0,0,0,0,0.267096106940212,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0.211107635297664,0,0,0.349934720244983,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0.439524537815682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0.394573622547734,0,0,0,0,0,0,0,0,0,0,0,0,0,0.520874984799877,0,0,0,0.110579259931225,0,0,0,0.278847488557207,0.615602068030377,0,0,0.179515288819544,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0,0,0.123563938946503,0,0.067401132980677,0,0,0,0,0,0,0,0,0.063186579628488,0.60129367765797,0.207376382794494,0,0,0,0,0,0,0,0,0,1.04836000945218,0,0,0.146178634172371,0,0.193978032976839,0,0.225980740780532,0.137041924646751,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0.407712618220842,0,0.101998217636322,0,0,0,0,0,0,0,0.458320848023367,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.136203406111576,0.160753148465019,0.137539436597234,0,0,0,0.0607495566580247,0,0.157611414598396,0,0,0,0,0,0.662091970365432,0.25426853765475,0,0,0,0,0,0.170388021785422,0,0.58620893471233,0,0,0,0,0,0.961086713109252,0.157204305099666,0,0.496166021811951,0,0,0,0,0,0,0,0.157054096250234,0,0.122026264901963,0.1251909307065,0,0,0.0620964029413835,0.138348634936231,0,0.909894705249887,4.56744533671948,0,0,0,0,0,0,0,0,0,0.228840068396924,0.151230923763239,0,0.147855149989634,0,0,0.155262956876259,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0.327609848846413,0.245772908753719,0,0,0,0,0,0,0,0,0.127894371303652,0,0.157265941855896,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0.504143392443436,0,0,0,0.0981477185010256,0,0.183428598521679,0,0,0,0.198916222116275,0.601682626794058,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0.227662191351298,0.177404740325278,0,0,0,0,0,0.111231401892069,0.313972371402056,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0.3414369541879,0,0,0.118332000730565,0,0,0,0.31020638566432,0,0,0,0,0,0.410651227424988,0,0.485710993059139,0,0.198950775161368,0,0.11294608203896,0,0,0.154348316215889,0,0,0,0,0,0,0,0,1.12780701575824,0,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380095503034311,0.101988829741982,0,0.18378979906969,0.250707539292375,4.16782840200317,0.267964130156178,0,0,0,0,0.581300188524055,0.31037357147929,0,0.190941474834495,0,0,0,0,0.143444410785353,0,0.0814032686109745,0,0,0,0,0,0,0.665756774185513,0,0 | ||
|short_description=p13@PRKD3 | |||
}} | }} |
Latest revision as of 02:05, 17 September 2015
Short description: | p13@PRKD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_PRKD3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000234179, NM_005813, uc002rqd.2, uc002rqf.1_5end |
EntrezGene: | PRKD3 |
HGNC: | 9408 |
UniProt: | O94806 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 1.22e-44 | 3 |
melanocyte | 3.25e-14 | 10 |
melanoblast | 3.25e-14 | 10 |
pigment cell | 1.90e-10 | 14 |
neurecto-epithelial cell | 1.33e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
epididymis | 9.85e-34 | 1 |
male reproductive organ | 5.42e-13 | 11 |
spleen | 2.89e-12 | 3 |
gastrointestinal system mesentery | 2.89e-12 | 3 |
stomach region | 2.89e-12 | 3 |
mesentery | 2.89e-12 | 3 |
gastrointestinal system serosa | 2.89e-12 | 3 |
mesentery of stomach | 2.89e-12 | 3 |
gut mesentery | 2.89e-12 | 3 |
dorsal mesentery | 2.89e-12 | 3 |
dorsal mesogastrium | 2.89e-12 | 3 |
peritoneal cavity | 2.89e-12 | 3 |
spleen primordium | 2.89e-12 | 3 |
male genital duct | 3.24e-12 | 3 |
internal male genitalia | 3.24e-12 | 3 |
intraembryonic coelom | 6.34e-12 | 12 |
duct of male reproductive system | 1.70e-09 | 4 |
male organism | 5.57e-07 | 22 |
male reproductive system | 5.57e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
melanoma | 5.48e-18 | 2 |