FFCP PHASE1:Hg19::chr2:52565599..52565602,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:52565599..52565602,+ | |||
|coexpression_cluster_id=C49 | |||
|description=CAGE_peak_at_chr2:52565599..52565602,+ | |||
|id=chr2:52565599..52565602,+ | |||
|ontology_enrichment_celltype=CL:0002322!1.28e-18!5;CL:0001014!9.55e-13!2;CL:0001016!9.55e-13!2;CL:0000540!9.93e-10!6;CL:0000031!9.93e-10!6;CL:0000404!9.93e-10!6;CL:0000039!1.92e-08!7;CL:0000586!1.92e-08!7;CL:0000047!2.12e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000540;2.38e-27;6!CL:0000404;2.38e-27;6!CL:0000039;1.28e-23;7!CL:0000586;1.28e-23;7!CL:0002319;6.82e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.38e-27,6;CL:0000031,2.38e-27,6;CL:0000404,2.38e-27,6;CL:0000039,1.28e-23,7;CL:0000586,1.28e-23,7;CL:0000047,8.12e-21,8;CL:0002319,6.82e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000031;2.38e-27;6!UBERON:0009117;6.93e-17;10!UBERON:0005564;6.93e-17;10 | |||
|ontology_enrichment_disease=DOID:3095!1.97e-12!22;DOID:2994!1.97e-12!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;5.72e-17;22!DOID:2994;5.72e-17;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,5.72e-17,22;DOID:2994,5.72e-17,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!1.95e-07!8;UBERON:0002134!2.37e-07!1;UBERON:0005208!2.37e-07!1;UBERON:0005946!2.37e-07!1;UBERON:0005965!2.37e-07!1;UBERON:0002078!2.37e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;8.12e-21;8!UBERON:0003135;1.88e-15;11!UBERON:0000991;1.37e-08;21!UBERON:0003101;3.04e-08;22!UBERON:0000079;3.04e-08;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,8.12e-21,8;UBERON:0003135,1.88e-15,11;UBERON:0000991,1.37e-08,21;UBERON:0009196,1.37e-08,21;UBERON:0009117,1.37e-08,21;UBERON:0005564,1.37e-08,21;UBERON:0004176,3.04e-08,22;UBERON:0003101,3.04e-08,22;UBERON:0000079,3.04e-08,22 | |||
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|short_description=p@chr2:52565599..52565602,+ | |||
}} | }} |
Latest revision as of 10:45, 29 July 2015
Short description: | p@chr2:52565599..52565602, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:52565599..52565602, + |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.38e-27 | 6 |
neuroblast | 2.38e-27 | 6 |
electrically signaling cell | 2.38e-27 | 6 |
germ line cell | 1.28e-23 | 7 |
germ cell | 1.28e-23 | 7 |
neuronal stem cell | 8.12e-21 | 8 |
neural cell | 6.82e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
testis | 8.12e-21 | 8 |
male reproductive organ | 1.88e-15 | 11 |
gonad | 1.37e-08 | 21 |
indifferent external genitalia | 1.37e-08 | 21 |
indifferent gonad | 1.37e-08 | 21 |
gonad primordium | 1.37e-08 | 21 |
external genitalia | 3.04e-08 | 22 |
male organism | 3.04e-08 | 22 |
male reproductive system | 3.04e-08 | 22 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 5.72e-17 | 22 |
germ cell cancer | 5.72e-17 | 22 |