FFCP PHASE1:Hg19::chr2:70520832..70520881,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:70520832..70520881,- to FFCP PHASE1:Hg19::chr2:70520832..70520881,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6637 | |EntrezGene=6637 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11163 | |HGNC=11163 | ||
|TSSclassifier=strong | |||
|UniProt=C9JVQ0,P62308 | |UniProt=C9JVQ0,P62308 | ||
|association_with_transcript=0bp_to_ENST00000429728,ENST00000454893,ENST00000480370,ENST00000488400,NM_003096,uc002sgp.2_5end | |||
|cluster_id=chr2:70520832..70520881,- | |||
|description=CAGE_peak_1_at_SNRPG_5end | |||
|id=chr2:70520832..70520881,- | |||
|ontology_enrichment_celltype=CL:0000012!9.63e-18!682;CL:0000548!1.97e-17!679;CL:0000004!1.97e-17!679;CL:0000255!1.97e-17!679;CL:0000066!4.14e-14!254;CL:0000003!1.52e-10!722;CL:0000063!3.50e-08!578;CL:0002321!3.45e-07!248;CL:0000144!3.63e-07!625;CL:0000220!6.21e-07!246 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.16e-14,253;CL:0002321,2.22e-07,250 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.36e-34!235;DOID:14566!2.25e-34!239;DOID:0050687!3.64e-19!143;DOID:0050686!1.87e-17!137;DOID:305!3.30e-14!106;DOID:2531!1.10e-12!51;DOID:0060083!1.10e-12!51;DOID:1240!4.94e-10!39;DOID:8692!3.00e-08!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;1.74e-08;39!DOID:2531;2.08e-08;51!DOID:0060083;2.08e-08;51!DOID:8692;4.43e-08;31 | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.36e-34,235;DOID:14566,2.25e-34,239;DOID:0050687,3.64e-19,143;DOID:0050686,1.87e-17,137;DOID:305,3.30e-14,106;DOID:2531,1.10e-12,51;DOID:0060083,1.10e-12,51;DOID:1240,4.94e-10,39;DOID:8692,3.00e-08,31 | |||
|ontology_enrichment_uberon=UBERON:0003104!3.84e-07!238;UBERON:0009142!3.84e-07!238 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005177,7.37e-08,101 | |||
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|short_description=p1@SNRPG | |||
}} | }} |
Latest revision as of 06:43, 18 September 2015
Short description: | p1@SNRPG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SNRPG_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000429728, ENST00000454893, ENST00000480370, ENST00000488400, NM_003096, uc002sgp.2_5end |
EntrezGene: | SNRPG |
HGNC: | 11163 |
UniProt: | C9JVQ0P62308 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.16e-14 | 253 |
embryonic cell | 2.22e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
trunk region element | 7.37e-08 | 101 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.36e-34 | 235 |
disease of cellular proliferation | 2.25e-34 | 239 |
cell type cancer | 3.64e-19 | 143 |
organ system cancer | 1.87e-17 | 137 |
carcinoma | 3.30e-14 | 106 |
hematologic cancer | 1.10e-12 | 51 |
immune system cancer | 1.10e-12 | 51 |
leukemia | 4.94e-10 | 39 |
myeloid leukemia | 3.00e-08 | 31 |