FFCP PHASE1:Hg19::chr3:37262958..37262962,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:37262958..37262962,+ to FFCP PHASE1:Hg19::chr3:37262958..37262962,+: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr3:37262958..37262962,+ | |||
|coexpression_cluster_id=C513 | |||
|description=CAGE_peak_at_chr3:37262958..37262962,+ | |||
|id=chr3:37262958..37262962,+ | |||
|ontology_enrichment_celltype=CL:0000066!8.79e-18!254;CL:0002076!7.91e-14!43;CL:0002368!1.25e-13!13;CL:0000223!2.67e-13!59;CL:0002202!1.30e-11!9;CL:0002632!1.30e-11!9 | |||
|ontology_enrichment_celltype_v019=CL:0000307;1.63e-15;3!CL:0002368;1.81e-13;13!CL:0002202;2.69e-11;9!CL:0002632;2.69e-11;9!CL:0002076;1.42e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,1.69e-15,3;CL:0000069,1.69e-15,3;CL:0000307,1.69e-15,3;CL:0000377,1.69e-15,3;CL:0002368,1.73e-13,13;CL:0002076,1.08e-11,42;CL:0002202,2.60e-11,9;CL:0002632,2.60e-11,9;CL:0000223,9.14e-11,58 | |||
|ontology_enrichment_development_v019=CL:0000377;1.63e-15;3!CL:0000223;5.29e-07;58 | |||
|ontology_enrichment_disease=DOID:0050687!2.34e-26!143;DOID:305!4.75e-25!106;DOID:162!1.23e-22!235;DOID:14566!1.98e-22!239;DOID:1749!2.80e-12!14;DOID:3908!8.26e-08!5;DOID:299!3.09e-07!25;DOID:7!5.34e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.88e-12;14!DOID:0060085;1.13e-11;1!DOID:3165;1.13e-11;1!DOID:0060121;1.13e-11;1!DOID:2438;1.13e-11;1!DOID:4418;1.13e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,2.00e-12,14;DOID:0060085,1.07e-11,1;DOID:3165,1.07e-11,1;DOID:0060121,1.07e-11,1;DOID:2438,1.07e-11,1;DOID:4418,1.07e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0000065!1.81e-07!53;UBERON:0007196!8.58e-07!14;UBERON:0001558!8.58e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0003126;3.78e-07;7!UBERON:0001005;3.78e-07;7!UBERON:0007196;5.63e-07;15!UBERON:0001558;5.63e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,3.84e-07,7;UBERON:0001005,3.84e-07,7;UBERON:0007196,5.52e-07,15;UBERON:0001558,5.52e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0.263766978228454,0,0.331397375727916,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0.919421224478927,0.6024118375565,1.47901604066715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0.103052529238439,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0.171567810298526,0,0,0.301586917234893,0.462942225792648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985143749731331,1.16253575405585,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.771048469013278,0,0.0821271560138091,0.519254429183621,0.232420756919918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0.223874754722178,0,0,0.256450125116389,0,0.650756789328606,0,0,0,0,0.650060246036521,0,0,0.308097234229289,0,0.275673144969061,0,0,0,0,0.165284915360978,0,4.08360679982669,0.10115778085555,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288666338176536,4.02181365321472,8.71127878890581,0,0,0,0,0,0,0,0,0,0,0,0,0,0.640944426764839,0,0.735120647943095,0,0,0,0.637705090915289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0.852408440419239,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0.102268682502155,0,0,0.808815160325942,0,0,0,0,0,0,0,0,0,0,0,2.27586896570999,0.254253650292766,0.236387681767936,0.689486746482929,0.291604613383254,0,0,0,0,0,0,0,0.10893846351899,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,2.84630599086278,0.158936578980379,0.210998064528027,0,0.989471500037586,0,0,0,0,1.48260564340311,0.247127877893006,0.208843899010911,0,0,0,0,0.978323094660449,0,0,0,0,0,0.901940516486955,0,1.32930774541437,0,0,0,0,0,0.173559738335131,0.195984794828755,0.69647365264322,0,0.343972064943233,0,0,0.164230914106418,0,0,0,0.822251547880505,1.39100228192093,0,0,0.0801588202515337,0,0.39961921916426,0,0,0.171594997861965,0,0.124252535565433,0,0.407712618220842,0.523014231561666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.32991899054908,0.0787831823072236,0,0.0674035438541849,0,0,0,0,0,0.275078873194468,0,0.2249738915515,1.5476039091159,0,0,0,0,0.316801009558219,0.179287339332845,0.383830394638891,0,0,0,0,0,0,0,0.246277562248017,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,2.55336503108073,0,0,0,0,0,0,0,0,0,0,0,0,0.999843263696853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.813741466409323,0.181848659202559,0.214821114084977,0,0,0,0,0,0,0,0.643324774124777,0,0,0,0.244736704506468,0,0,0.438568099157414,0,0.192914038270915,0.168942440653073,0.256241518587947,0,0,0,0,0,0,0.327609848846413,0.245772908753719,0.633936370075881,0.19998739585493,0,0,0,0,0,0,0,0.107824811396682,0.471797825567689,0,0,0.425149840203366,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0.366857197043358,2.77261598760812,0,0,0,0,0,0,0,0.163771917510097,0.147856086217045,0,0,0,0,0,0,0,0,1.27762427639595,0,0,0,0,0,0.115233987555779,0,0,0.0657727735628491,0.709163045303809,1.77970243027311,0,0,0,0,0,0,0,0,0.23248285073625,0,0,0,0.17071847709395,0,0,0,0.0852134047591577,0,1.14553434272025,0,0.955538938977433,0,0.196300467230486,0.243835849964539,0,0,0,0,0,0,0,0,0,0,0,0.437119121007915,0,0,0,0,0,0,0,0,0,0,0.178553938605658,2.11736923029415,0,0,0,0,0,0,0,0,0,0,0,0.378499274505237,0.437062287854782,0.253397002022874,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0,1.00918676322552,0,0,0.435433495793923,0,0,0,0,0.569822880276821,0.106727345877715,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0.263766978228454,0,0.331397375727916,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0.919421224478927,0.6024118375565,1.47901604066715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0.103052529238439,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0.171567810298526,0,0,0.301586917234893,0.462942225792648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985143749731331,1.16253575405585,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.771048469013278,0,0.0821271560138091,0.519254429183621,0.232420756919918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0.223874754722178,0,0,0.256450125116389,0,0.650756789328606,0,0,0,0,0.650060246036521,0,0,0.308097234229289,0,0.275673144969061,0,0,0,0,0.165284915360978,0,4.08360679982669,0.10115778085555,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288666338176536,4.02181365321472,8.71127878890581,0,0,0,0,0,0,0,0,0,0,0,0,0,0.640944426764839,0,0.735120647943095,0,0,0,0.637705090915289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0.852408440419239,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0.102268682502155,0,0,0.808815160325942,0,0,0,0,0,0,0,0,0,0,0,2.27586896570999,0.254253650292766,0.236387681767936,0.689486746482929,0.291604613383254,0,0,0,0,0,0,0,0.10893846351899,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,2.84630599086278,0.158936578980379,0.210998064528027,0,0.989471500037586,0,0,0,0,1.48260564340311,0.247127877893006,0.208843899010911,0,0,0,0,0.978323094660449,0,0,0,0,0,0.901940516486955,0,1.32930774541437,0,0,0,0,0,0.173559738335131,0.195984794828755,0.69647365264322,0,0.343972064943233,0,0,0.164230914106418,0,0,0,0.822251547880505,1.39100228192093,0,0,0.0801588202515337,0,0.39961921916426,0,0,0.171594997861965,0,0.124252535565433,0,0.407712618220842,0.523014231561666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.32991899054908,0.0787831823072236,0,0.0674035438541849,0,0,0,0,0,0.275078873194468,0,0.2249738915515,1.5476039091159,0,0,0,0,0.316801009558219,0.179287339332845,0.383830394638891,0,0,0,0,0,0,0,0.246277562248017,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,2.55336503108073,0,0,0,0,0,0,0,0,0,0,0,0,0.999843263696853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.813741466409323,0.181848659202559,0.214821114084977,0,0,0,0,0,0,0,0.643324774124777,0,0,0,0.244736704506468,0,0,0.438568099157414,0,0.192914038270915,0.168942440653073,0.256241518587947,0,0,0,0,0,0,0.327609848846413,0.245772908753719,0.633936370075881,0.19998739585493,0,0,0,0,0,0,0,0.107824811396682,0.471797825567689,0,0,0.425149840203366,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0.366857197043358,2.77261598760812,0,0,0,0,0,0,0,0.163771917510097,0.147856086217045,0,0,0,0,0,0,0,0,1.27762427639595,0,0,0,0,0,0.115233987555779,0,0,0.0657727735628491,0.709163045303809,1.77970243027311,0,0,0,0,0,0,0,0,0.23248285073625,0,0,0,0.17071847709395,0,0,0,0.0852134047591577,0,1.14553434272025,0,0.955538938977433,0,0.196300467230486,0.243835849964539,0,0,0,0,0,0,0,0,0,0,0,0.437119121007915,0,0,0,0,0,0,0,0,0,0,0.178553938605658,2.11736923029415,0,0,0,0,0,0,0,0,0,0,0,0.378499274505237,0.437062287854782,0.253397002022874,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0,1.00918676322552,0,0,0.435433495793923,0,0,0,0,0.569822880276821,0.106727345877715,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr3:37262958..37262962,+ | |||
}} | }} |
Latest revision as of 20:42, 29 July 2015
Short description: | p@chr3:37262958..37262962, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:37262958..37262962, + |
Coexpression cluster: | C513_Tracheal_Bronchial_squamous_bronchial_Small_oral_medulloblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 1.69e-15 | 3 |
branched duct epithelial cell | 1.69e-15 | 3 |
tracheal epithelial cell | 1.69e-15 | 3 |
tracheoblast | 1.69e-15 | 3 |
respiratory epithelial cell | 1.73e-13 | 13 |
endo-epithelial cell | 1.08e-11 | 42 |
epithelial cell of tracheobronchial tree | 2.60e-11 | 9 |
epithelial cell of lower respiratory tract | 2.60e-11 | 9 |
endodermal cell | 9.14e-11 | 58 |
Ontology term | p-value | n |
---|---|---|
trachea | 3.84e-07 | 7 |
respiratory airway | 3.84e-07 | 7 |
tracheobronchial tree | 5.52e-07 | 15 |
lower respiratory tract | 5.52e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 2.00e-12 | 14 |
organ system benign neoplasm | 1.07e-11 | 1 |
skin benign neoplasm | 1.07e-11 | 1 |
integumentary system benign neoplasm | 1.07e-11 | 1 |
dermis tumor | 1.07e-11 | 1 |
cutaneous fibrous histiocytoma | 1.07e-11 | 1 |