FFCP PHASE1:Hg19::chr3:98595244..98595257,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:98595244..98595257,- to FFCP PHASE1:Hg19::chr3:98595244..98595257,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr3:98595244..98595257,- | |||
|description=CAGE_peak_at_chr3:98595244..98595257,- | |||
|id=chr3:98595244..98595257,- | |||
|ontology_enrichment_celltype=CL:0000055!3.32e-11!180;CL:0000220!4.73e-10!246;CL:0002321!6.92e-10!248;CL:0000243!2.00e-08!15;CL:0000125!2.00e-08!15;CL:0000030!2.00e-08!15;CL:0000339!2.00e-08!15;CL:0002319!1.04e-07!25;CL:0000095!2.84e-07!17;CL:0000123!2.84e-07!17 | |||
|ontology_enrichment_celltype_v019=CL:0000243;6.91e-10;15!CL:0000125;6.91e-10;15!CL:0002319;1.42e-08;25!CL:0000095;1.67e-08;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000243,6.58e-10,15;CL:0000125,6.58e-10,15;CL:0000030,6.58e-10,15;CL:0000339,6.58e-10,15;CL:0002319,1.29e-08,25;CL:0000095,1.60e-08,17;CL:0000123,1.60e-08,17;CL:0002321,2.38e-07,250;CL:0000133,5.03e-07,59 | |||
|ontology_enrichment_development_v019=CL:0000339;6.91e-10;15 | |||
|ontology_enrichment_disease=DOID:2394!5.27e-09!14;DOID:120!4.19e-07!27;DOID:14566!4.47e-07!239;DOID:193!4.90e-07!29 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.03e-15;14!DOID:120;4.71e-12;27!DOID:193;7.29e-11;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,4.70e-16,14;DOID:120,2.43e-12,27;DOID:193,3.99e-11,29 | |||
|ontology_enrichment_uberon=UBERON:0000475!9.03e-09!365;UBERON:0000119!5.10e-08!312;UBERON:0000483!5.54e-08!309;UBERON:0000992!6.07e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0000992;3.92e-10;13!UBERON:0001134;1.08e-07;16!UBERON:0002036;1.08e-07;16!UBERON:0002118;1.71e-07;5!UBERON:0002119;7.39e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000992,2.13e-10,13;UBERON:0002118,8.33e-08,5;UBERON:0002119,6.29e-07,4 | |||
|phase1_expression=1.81678379270557,0.214100523890983,0.281908808191942,0,0.446961094427288,0.872338524100369,0,0,0.261185628199839,2.45733936501509,0,0.218441372130172,0,0,0,0,2.41077811209591,0.730310090387373,1.95173119516203,0.861847406537515,1.42800483870977,1.88072832886853,0.286235987131057,3.42186062682211,1.50651167513763,0,0.164201178899891,0,0,0,0,0,0,0,0,0.284338464974843,0.293600439334847,0,0,0,0.671746422719773,0,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0.263384084775077,0.196709770113833,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0.328875809207352,0.276350017785848,0,0.14828656316206,0,0,0.113309342697566,0,0,0.253019692019503,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0.795285947051099,0.486634870302636,19.1905678843058,9.53436409089025,11.4185221401064,0.458426764241994,0.364295288292542,0,0,0,0,0,0,0,0.39752481473341,0,0,0,0.419499436209906,0,0.208994966536811,1.29208379584664,1.42306505074684,0.66944122552934,0,0,0,0.367663080345869,0,0.625098097988558,0,0.337834441449967,0,0,0.183201743930407,0,0,0,0,0.25326102332916,7.54732330635347,4.87622255272983,0.709336764396714,0,0,0.24666754841716,0.622422070799533,1.21239604862719,1.14423332179421,0.605429710579726,0,0,0.936480230490962,0.570471821544449,0.597794722207204,2.70099346880659,1.13311061057692,1.96631129383148,1.02077085627447,2.82518929817066,0,1.18800285728205,0,0,0,0.336672227908132,0.625592599359821,0.554128230968366,0,0,0.150238058906597,0.567160915800105,6.81680615617675,0.427114777637135,0.423863802319124,0.900273288253207,0.103052529238439,0.257640540045629,0.18611685633159,2.19409231913646,0.292311015483596,3.78650661366172,1.10459878370759,0.161646056818812,1.77504796258307,0.906768884048762,0,0.386521706326594,1.09098448236334,1.43402297694502,0,0.397589304964456,0.116193942869518,0.310983165046111,0,0.72995471815166,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0.196221465125346,0.38474715694639,0,0,0.4115740113314,0,1.26755034821831,0,0.590789906681404,0.441463099414651,0.122988438543114,0.514703430895577,0.329250856225877,0,0.301586917234893,0,0,0,0,4.9850074139283,0.117408694235822,0.433099343283221,1.38895653772983,1.90254152234598,0,0,0,0,0,0,0.839910640994298,0.425325291727159,0.806026704325635,0,0,3.4486426652716,1.14462964217194,0.621984346622316,0.288239906833923,0.50496973370552,0.126995788584338,0.381988425558278,0,0,0,0.300343057843917,0,0.224262168690721,0.43596006883328,0.1466765716419,7.23921608243556,0,0,0,0,0,0,0.799266537048298,0,0,0,0.65147236858747,0.355391948742546,0,4.82303003295338,1.74306691720059,2.19940580600526,0,0.502257091432126,0,0.479249710983165,1.14861935834114,1.42636905040718,3.90909528002464,7.80810025691457,1.43248770591916,0,0,0,0,0,2.60279707715243,2.31986643833309,0.502548796003046,2.55175500661265,0,0,0,0,0.500170521059677,0,0.207970861530807,0.892144943985809,0.157702415033935,0.117141414992713,0.300946099727719,0,0,0,0.184369168541703,0.521301686808497,0,1.02943027143257,0.206768026122887,0.215714200818617,0,0,0,0,0.248107807818777,0.460385919864187,0,0,0.511707249066704,0.64341568457443,0,1.23367755042124,0.532685175939381,0.739144404124282,1.55776328755086,0.464841513839837,0.483437798366489,2.20557117333613,0.736647911487171,0.459257792658427,0.546273504020151,1.57349297951309,1.80479845162965,0.693138033939733,0,0,1.05551628892876,0,0.680374821106063,0.863663664408557,0,1.35473218771926,0,1.52925763827023,0.831076008928724,1.56712328305525,0.219259876645935,0,0.512900250232778,0.656029291399411,0.325378394664303,0.206082023295445,0.27470839445503,0.577566499444116,1.72279661398852,0,0,0.870036464629098,2.15668063960502,1.84204409671355,1.37836572484531,0.751941714077915,1.0151168573996,1.96021243057032,0.623224249527161,0.330569830721956,0.960950336825531,2.67986696238627,0,0,3.77774816196768,0,0.308033580176089,0,0,0.37064843820784,2.00374841438788,0.744316738719335,1.89827654831236,1.14378116354295,0,0,0.318203247925937,0,1.07923474549989,0.823611089208164,0.589062011728432,0.808729926293264,0,0.842516912477962,0,1.46228093778771,1.05650146756755,0.409499734223957,0.282810863907425,1.13008116620243,0.551365343546124,0,2.63070531152258,0.578775534266688,0,0.811641507850816,0.92947049429925,0.563391205064483,0.860468113224309,0,0.35667105148125,2.48332744849418,0,0.329294892959902,0,0,0.384888450902048,0.670302275535787,0,0.188287601553558,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,1.71528151186722,0,0.28853842595289,0.213425530045242,0,0,0,0,0.324621940274555,0,0,0.313359791546046,0,0,0,0.80719882876419,0,0,0,0,0,0.19538809540204,0,0,0.540911356951966,0,1.4098700508785,0,0,0.36408156524854,0.445773537109913,12.5019904594822,0.23874448473769,0,0.921482106297696,0,0,2.22617410045812,0.16480387422676,1.68900326502395,0,0.552567831062295,0,2.0453736500431,0,0.311039587661807,7.09959974063882,0.716084698702437,0,0.0986434056369336,0,0,0,0,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|short_description=p@chr3:98595244..98595257,- | |||
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Latest revision as of 00:08, 30 July 2015
Short description: | p@chr3:98595244..98595257, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:98595244..98595257, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glial cell (sensu Vertebrata) | 6.58e-10 | 15 |
glial cell | 6.58e-10 | 15 |
glioblast | 6.58e-10 | 15 |
glioblast (sensu Vertebrata) | 6.58e-10 | 15 |
neural cell | 1.29e-08 | 25 |
neuron associated cell | 1.60e-08 | 17 |
neuron associated cell (sensu Vertebrata) | 1.60e-08 | 17 |
embryonic cell | 2.38e-07 | 250 |
neurectodermal cell | 5.03e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
female gonad | 2.13e-10 | 13 |
right ovary | 8.33e-08 | 5 |
left ovary | 6.29e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 4.70e-16 | 14 |
female reproductive organ cancer | 2.43e-12 | 27 |
reproductive organ cancer | 3.99e-11 | 29 |