FFCP PHASE1:Hg19::chr4:120549947..120549969,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr4:120549947..120549969,- to FFCP PHASE1:Hg19::chr4:120549947..120549969,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8654 | |EntrezGene=8654 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8784 | |HGNC=8784 | ||
|TSSclassifier=strong | |||
|UniProt=O76074 | |UniProt=O76074 | ||
|association_with_transcript=11bp_to_NM_001083,uc003idh.2_5end | |||
|cluster_id=chr4:120549947..120549969,- | |||
|coexpression_cluster_id=C1933 | |||
|description=CAGE_peak_2_at_PDE5A_5end | |||
|id=chr4:120549947..120549969,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!2.64e-15!169;UBERON:0000925!2.64e-15!169;UBERON:0006595!2.64e-15!169;UBERON:0001007!1.02e-13!155;UBERON:0001555!1.02e-13!155;UBERON:0007026!1.02e-13!155;UBERON:0000481!1.07e-09!347;UBERON:0005156!3.33e-09!59;UBERON:0000990!3.33e-09!59;UBERON:0000161!4.09e-09!35;UBERON:0001046!1.68e-08!19;UBERON:0003102!3.49e-08!95;UBERON:0000468!4.19e-08!659;UBERON:0004921!6.32e-08!129;UBERON:0004185!6.32e-08!129;UBERON:0004122!1.30e-07!15;UBERON:0003101!1.88e-07!22;UBERON:0000079!1.88e-07!22;UBERON:0000077!2.80e-07!130;UBERON:0000162!3.23e-07!14;UBERON:0001353!3.23e-07!14;UBERON:0000163!3.23e-07!14;UBERON:0006866!3.23e-07!14;UBERON:0000164!3.23e-07!14;UBERON:0000931!3.23e-07!14;UBERON:0000475!4.65e-07!365;UBERON:0003104!8.78e-07!238;UBERON:0009142!8.78e-07!238;UBERON:0001444!9.00e-07!48 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;1.73e-09;17!UBERON:0005409;1.08e-08;22!UBERON:0001555;1.74e-08;54!UBERON:0004921;3.67e-08;33!UBERON:0003937;1.56e-07;12!UBERON:0005399;1.56e-07;12!UBERON:0000075;2.42e-07;16!UBERON:0003101;3.92e-07;22!UBERON:0000079;3.92e-07;22!UBERON:0002367;5.50e-07;11!UBERON:0010147;5.50e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.03e-16,160;UBERON:0000925,2.03e-16,160;UBERON:0006595,2.03e-16,160;UBERON:0001007,1.55e-15,145;UBERON:0001555,1.55e-15,145;UBERON:0007026,1.55e-15,145;UBERON:0000160,1.52e-09,17;UBERON:0004122,4.34e-09,15;UBERON:0001046,5.53e-09,19;UBERON:0004921,7.62e-09,118;UBERON:0003102,8.26e-09,99;UBERON:0000161,1.36e-08,36;UBERON:0000162,1.43e-08,14;UBERON:0001353,1.43e-08,14;UBERON:0000163,1.43e-08,14;UBERON:0006866,1.43e-08,14;UBERON:0000164,1.43e-08,14;UBERON:0000931,1.43e-08,14;UBERON:0005156,1.10e-07,59;UBERON:0000990,1.10e-07,59;UBERON:0003937,1.52e-07,12;UBERON:0005399,1.52e-07,12;UBERON:0000075,1.91e-07,16;UBERON:0003101,3.35e-07,22;UBERON:0000079,3.35e-07,22;UBERON:0002367,5.38e-07,11;UBERON:0010147,5.38e-07,11;UBERON:0009846,5.38e-07,11;UBERON:0003353,5.38e-07,11;UBERON:0004902,5.38e-07,11;UBERON:0003820,5.38e-07,11;UBERON:0009847,5.38e-07,11;UBERON:0005409,5.53e-07,25 | |||
|phase1_expression=0.363356758541113,0.214100523890983,1.12763523276777,0,0.446961094427288,0,0,0,0,0.737201809504527,0,2.62129646556207,1.31883489114227,3.46545788288131,4.30816588446291,1.34465029290355,0,0,0.975865597581014,0.123121058076788,0.204000691244253,0,0,0.136874425072884,0.87879847716362,0,0.0821005894499457,0,0,0,0.154816123316076,2.75826367343678,0,0,0,0,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0,0.400395987036012,0.574752439954483,0,0,0.569212969109448,1.17447437874188,0,0,0,0.526768169550154,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0.651083453856419,0,0,0,0,0,0,0,0,0,0,0,0.639312809217652,0.361439152384566,1.50401373190767,1.15877215168659,0,0,1.70162670895322,3.32594096193846,2.0202000709419,1.0478326039817,0,1.11235332835329,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,1.49091585508596,4.68532893158945,5.95841313659485,4.01571269048339,3.54668382198357,2.80338800071154,0,0.49333509683432,0.311211035399766,0.134710672069688,0.326923806226917,0.605429710579726,0.576175924479999,0.70296429550139,0,0,0,0,0.161872944368132,0,3.87892925384297,2.08818339430006,2.06651562351531,3.56400857184616,5.68713937340681,0.910161361938026,2.15585442544872,2.18836948140286,2.25213335769535,4.71008996323111,12.7303510055443,8.58165828237255,2.55404700141215,0.453728732640084,3.94657198515496,1.06778694409284,1.48352330811693,3.00091096084402,1.64884046781502,7.21393512127762,2.23340227597908,0.168776332241266,0.779496041289589,5.3011092591264,1.65689817556139,6.30419621593366,1.06502877754984,1.5112814734146,2.03472710772585,0.386521706326594,0,1.14721838155602,3.65921118388786,4.90360142789496,2.32387885739037,3.31715376049185,1.7662459561294,5.10968302706162,0,0.643240938192885,1.38134921352481,2.3218396401599,0.721879481669586,0.828147600278907,1.18009283054671,0.482022059766964,0.661763836394364,0,1.18635309555548,0.943819157121151,0.196221465125346,0.38474715694639,0,0,0,0,0,0,1.18157981336281,0,3.44367627920718,2.91665277507493,1.64625428112938,0,0.703702806881416,2.03694579348765,0.325808305310325,1.03993478527958,5.77325368101093,1.15930404975077,3.05262605013136,0,0,0.380508304469197,2.37061319387782,1.71697232418975,0,0,0,1.87467667973554,2.68771405118175,2.1266264586358,0.358234090811393,0.581267877027924,0.383382679165211,0,0.088048434013226,0.621984346622316,1.72943944100354,1.13618190083742,0.190493682876507,0.381988425558278,0,1.71072446022705,0,0,0,0.112131084345361,0.87192013766656,0.22001485746285,1.93907573636667,0,0,3.72313363218819,6.24044621468197,0.257207374262142,0,0,5.86209773998405,0,0.823240336780769,0,7.81862287233601,0,2.41151501647669,0.871533458600294,1.29964888536674,0,0,0,3.11512312139057,0,0,0.289562613335158,0.61642896765115,0.358121926479791,0,0,0.215627574859517,0,0.254094624222463,0,0,0,0,0,0,0,5.15304265220388,6.5022167737758,3.7977103317963,0.623912584592421,1.60586089917446,0.946214490203608,1.87426263988341,0.601892199455438,0,2.0694614258501,1.99267679560631,0.921845842708516,1.30325421702124,1.17480694477644,0.686286847621712,0,0,0.213455115606889,1.21251028578504,1.66435439510497,0.907170879989041,2.23297027036899,3.37616341233737,1.68396056659844,3.58789617915963,0,3.53878626515936,1.48418066444991,0.462629081407967,0.355123450626254,0.657017248110473,1.55776328755086,0.813472649219715,1.45031339509947,3.20810352485256,2.3941057123333,17.3369816728556,12.20010825645,16.6528006998469,0.902399225814824,0.539107359730903,0,0,0.105551628892876,0,0,0.215915916102139,0,0.812839312631559,0,0,0,0.223874754722178,0,0,0.256450125116389,0.328014645699706,0.976135183992909,3.40035338437484,3.93748698718877,4.37300349579116,1.14853107599234,0.650060246036521,3.21367859688319,0,0.616194468458578,0.15350367472613,0.413509717453592,0.429680979473094,0.580066775656914,0.170453254832202,0.445160178233687,1.15699440752685,0.768760269460425,2.16941611240793,2.6301023022443,2.78907329578371,7.55549632393536,1.3940745403212,0.924100740528266,0.532306030317022,1.73986598415015,0,2.28999818787186,0.744316738719335,0,0.953150969619124,0,1.71175595213568,2.22742273548156,0,14.0300516914985,14.5504625760109,13.4306138674083,0.808729926293264,4.75530963519025,0.842516912477962,2.92580243453754,1.21856744815642,1.05650146756755,11.4659925582708,12.8678943077879,0,0.551365343546124,1.99031692572366,0.876901770507525,0.578775534266688,4.59126326432643,0.811641507850816,1.54911749049875,0.563391205064483,0.860468113224309,0.0982490410131212,1.426684205925,2.48332744849418,0.844430541190656,1.31717957183961,0.75894634753143,1.04980416073495,1.05844323998063,0,0,1.97701981631236,0.43050537267123,1.68471475667626,0.443430153536676,2.98640420269047,2.53723804616085,3.0585488285695,0.569647187174163,1.66762242820452,0.822724546172388,1.94541993357815,4.32025149790492,3.17250070517708,0,0,0.490080431962063,0,0,0.569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|phase1_expression=0.363356758541113,0.214100523890983,1.12763523276777,0,0.446961094427288,0,0,0,0,0.737201809504527,0,2.62129646556207,1.31883489114227,3.46545788288131,4.30816588446291,1.34465029290355,0,0,0.975865597581014,0.123121058076788,0.204000691244253,0,0,0.136874425072884,0.87879847716362,0,0.0821005894499457,0,0,0,0.154816123316076,2.75826367343678,0,0,0,0,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0,0.400395987036012,0.574752439954483,0,0,0.569212969109448,1.17447437874188,0,0,0,0.526768169550154,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0.651083453856419,0,0,0,0,0,0,0,0,0,0,0,0.639312809217652,0.361439152384566,1.50401373190767,1.15877215168659,0,0,1.70162670895322,3.32594096193846,2.0202000709419,1.0478326039817,0,1.11235332835329,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,1.49091585508596,4.68532893158945,5.95841313659485,4.01571269048339,3.54668382198357,2.80338800071154,0,0.49333509683432,0.311211035399766,0.134710672069688,0.326923806226917,0.605429710579726,0.576175924479999,0.70296429550139,0,0,0,0,0.161872944368132,0,3.87892925384297,2.08818339430006,2.06651562351531,3.56400857184616,5.68713937340681,0.910161361938026,2.15585442544872,2.18836948140286,2.25213335769535,4.71008996323111,12.7303510055443,8.58165828237255,2.55404700141215,0.453728732640084,3.94657198515496,1.06778694409284,1.48352330811693,3.00091096084402,1.64884046781502,7.21393512127762,2.23340227597908,0.168776332241266,0.779496041289589,5.3011092591264,1.65689817556139,6.30419621593366,1.06502877754984,1.5112814734146,2.03472710772585,0.386521706326594,0,1.14721838155602,3.65921118388786,4.90360142789496,2.32387885739037,3.31715376049185,1.7662459561294,5.10968302706162,0,0.643240938192885,1.38134921352481,2.3218396401599,0.721879481669586,0.828147600278907,1.18009283054671,0.482022059766964,0.661763836394364,0,1.18635309555548,0.943819157121151,0.196221465125346,0.38474715694639,0,0,0,0,0,0,1.18157981336281,0,3.44367627920718,2.91665277507493,1.64625428112938,0,0.703702806881416,2.03694579348765,0.325808305310325,1.03993478527958,5.77325368101093,1.15930404975077,3.05262605013136,0,0,0.380508304469197,2.37061319387782,1.71697232418975,0,0,0,1.87467667973554,2.68771405118175,2.1266264586358,0.358234090811393,0.581267877027924,0.383382679165211,0,0.088048434013226,0.621984346622316,1.72943944100354,1.13618190083742,0.190493682876507,0.381988425558278,0,1.71072446022705,0,0,0,0.112131084345361,0.87192013766656,0.22001485746285,1.93907573636667,0,0,3.72313363218819,6.24044621468197,0.257207374262142,0,0,5.86209773998405,0,0.823240336780769,0,7.81862287233601,0,2.41151501647669,0.871533458600294,1.29964888536674,0,0,0,3.11512312139057,0,0,0.289562613335158,0.61642896765115,0.358121926479791,0,0,0.215627574859517,0,0.254094624222463,0,0,0,0,0,0,0,5.15304265220388,6.5022167737758,3.7977103317963,0.623912584592421,1.60586089917446,0.946214490203608,1.87426263988341,0.601892199455438,0,2.0694614258501,1.99267679560631,0.921845842708516,1.30325421702124,1.17480694477644,0.686286847621712,0,0,0.213455115606889,1.21251028578504,1.66435439510497,0.907170879989041,2.23297027036899,3.37616341233737,1.68396056659844,3.58789617915963,0,3.53878626515936,1.48418066444991,0.462629081407967,0.355123450626254,0.657017248110473,1.55776328755086,0.813472649219715,1.45031339509947,3.20810352485256,2.3941057123333,17.3369816728556,12.20010825645,16.6528006998469,0.902399225814824,0.539107359730903,0,0,0.105551628892876,0,0,0.215915916102139,0,0.812839312631559,0,0,0,0.223874754722178,0,0,0.256450125116389,0.328014645699706,0.976135183992909,3.40035338437484,3.93748698718877,4.37300349579116,1.14853107599234,0.650060246036521,3.21367859688319,0,0.616194468458578,0.15350367472613,0.413509717453592,0.429680979473094,0.580066775656914,0.170453254832202,0.445160178233687,1.15699440752685,0.768760269460425,2.16941611240793,2.6301023022443,2.78907329578371,7.55549632393536,1.3940745403212,0.924100740528266,0.532306030317022,1.73986598415015,0,2.28999818787186,0.744316738719335,0,0.953150969619124,0,1.71175595213568,2.22742273548156,0,14.0300516914985,14.5504625760109,13.4306138674083,0.808729926293264,4.75530963519025,0.842516912477962,2.92580243453754,1.21856744815642,1.05650146756755,11.4659925582708,12.8678943077879,0,0.551365343546124,1.99031692572366,0.876901770507525,0.578775534266688,4.59126326432643,0.811641507850816,1.54911749049875,0.563391205064483,0.860468113224309,0.0982490410131212,1.426684205925,2.48332744849418,0.844430541190656,1.31717957183961,0.75894634753143,1.04980416073495,1.05844323998063,0,0,1.97701981631236,0.43050537267123,1.68471475667626,0.443430153536676,2.98640420269047,2.53723804616085,3.0585488285695,0.569647187174163,1.66762242820452,0.822724546172388,1.94541993357815,4.32025149790492,3.17250070517708,0,0,0.490080431962063,0,0,0.569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| ||
|short_description=p2@PDE5A | |||
}} | }} |
Latest revision as of 23:06, 24 September 2015
Short description: | p2@PDE5A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PDE5A_5end |
Coexpression cluster: | C1933_glioblastoma_small_Prostate_Smooth_rhabdomyosarcoma_normal_sacrococcigeal |
Association with transcript: | 11bp_to_NM_001083, uc003idh.2_5end |
EntrezGene: | PDE5A |
HGNC: | 8784 |
UniProt: | O76074 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 2.03e-16 | 160 |
endoderm | 2.03e-16 | 160 |
presumptive endoderm | 2.03e-16 | 160 |
digestive system | 1.55e-15 | 145 |
digestive tract | 1.55e-15 | 145 |
primitive gut | 1.55e-15 | 145 |
intestine | 1.52e-09 | 17 |
genitourinary system | 4.34e-09 | 15 |
hindgut | 5.53e-09 | 19 |
subdivision of digestive tract | 7.62e-09 | 118 |
surface structure | 8.26e-09 | 99 |
orifice | 1.36e-08 | 36 |
cloaca | 1.43e-08 | 14 |
anal region | 1.43e-08 | 14 |
embryonic cloaca | 1.43e-08 | 14 |
terminal part of digestive tract | 1.43e-08 | 14 |
primitive urogenital sinus | 1.43e-08 | 14 |
proctodeum | 1.43e-08 | 14 |
reproductive structure | 1.10e-07 | 59 |
reproductive system | 1.10e-07 | 59 |
sex gland | 1.52e-07 | 12 |
male reproductive gland | 1.52e-07 | 12 |
subdivision of skeletal system | 1.91e-07 | 16 |
male organism | 3.35e-07 | 22 |
male reproductive system | 3.35e-07 | 22 |
prostate gland | 5.38e-07 | 11 |
male accessory sex gland | 5.38e-07 | 11 |
embryonic cloacal epithelium | 5.38e-07 | 11 |
epithelium of hindgut | 5.38e-07 | 11 |
urogenital sinus epithelium | 5.38e-07 | 11 |
prostate bud | 5.38e-07 | 11 |
prostate field | 5.38e-07 | 11 |
gastrointestinal system | 5.53e-07 | 25 |