FFCP PHASE1:Hg19::chr4:140223670..140223682,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr4:140223670..140223682,- to FFCP PHASE1:Hg19::chr4:140223670..140223682,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4717 | |EntrezGene=4717 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7705 | |HGNC=7705 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000394225_5end | |||
|cluster_id=chr4:140223670..140223682,- | |||
|description=CAGE_peak_5_at_NDUFC1_5end | |||
|id=chr4:140223670..140223682,- | |||
|ontology_enrichment_celltype=CL:0000222!6.12e-07!119;CL:0000003!7.61e-07!722 | |||
|ontology_enrichment_celltype_v019=CL:1000497;1.66e-11;17!CL:0002518;1.66e-11;17!CL:1000449;1.63e-09;15!CL:0002681;1.78e-08;12!CL:0002584;1.78e-08;12!CL:1000746;8.03e-08;7!CL:1000612;8.03e-08;7 | |||
|ontology_enrichment_celltype_v019_2=CL:1000497,2.61e-11,17;CL:0002518,2.61e-11,17;CL:1000449,1.67e-09,15;CL:0002681,2.63e-08,12;CL:0002584,2.63e-08,12;CL:1000746,1.15e-07,7;CL:1000612,1.15e-07,7 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;1.63e-09;15!UBERON:0004819;1.63e-09;15!UBERON:0001285;1.63e-09;15!UBERON:0007684;1.63e-09;15!UBERON:0001225;1.78e-08;12!UBERON:0008987;1.78e-08;12!UBERON:0001851;5.94e-08;15!UBERON:0000074;8.03e-08;7!UBERON:0001229;8.03e-08;7!UBERON:0002113;5.25e-07;24!UBERON:0011143;5.25e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004211,1.67e-09,15;UBERON:0009773,1.67e-09,15;UBERON:0001231,1.67e-09,15;UBERON:0001285,1.67e-09,15;UBERON:0007684,1.67e-09,15;UBERON:0004208,1.67e-09,15;UBERON:0006555,1.05e-08,16;UBERON:0004819,1.05e-08,16;UBERON:0001225,2.63e-08,12;UBERON:0008987,2.63e-08,12;UBERON:0001851,8.66e-08,15;UBERON:0010532,1.15e-07,7;UBERON:0000074,1.15e-07,7;UBERON:0001229,1.15e-07,7;UBERON:0001230,1.15e-07,7;UBERON:0003220,1.15e-07,7;UBERON:0005749,1.15e-07,7;UBERON:0004199,1.15e-07,7;UBERON:0004209,1.15e-07,7;UBERON:0004198,1.15e-07,7 | |||
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| ||
|short_description=p5@NDUFC1 | |||
}} | }} |
Latest revision as of 07:02, 25 September 2015
Short description: | p5@NDUFC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_NDUFC1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000394225_5end |
EntrezGene: | NDUFC1 |
HGNC: | 7705 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cell | 2.61e-11 | 17 |
kidney epithelial cell | 2.61e-11 | 17 |
epithelial cell of nephron | 1.67e-09 | 15 |
kidney cortical cell | 2.63e-08 | 12 |
renal cortical epithelial cell | 2.63e-08 | 12 |
glomerular cell | 1.15e-07 | 7 |
kidney corpuscule cell | 1.15e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
nephron epithelium | 1.67e-09 | 15 |
renal tubule | 1.67e-09 | 15 |
nephron tubule | 1.67e-09 | 15 |
nephron | 1.67e-09 | 15 |
uriniferous tubule | 1.67e-09 | 15 |
nephrogenic mesenchyme | 1.67e-09 | 15 |
excretory tube | 1.05e-08 | 16 |
kidney epithelium | 1.05e-08 | 16 |
cortex of kidney | 2.63e-08 | 12 |
renal parenchyma | 2.63e-08 | 12 |
cortex | 8.66e-08 | 15 |
primitive nephron | 1.15e-07 | 7 |
renal glomerulus | 1.15e-07 | 7 |
renal corpuscle | 1.15e-07 | 7 |
glomerular capsule | 1.15e-07 | 7 |
metanephric mesenchyme | 1.15e-07 | 7 |
glomerular tuft | 1.15e-07 | 7 |
S-shaped body | 1.15e-07 | 7 |
renal vesicle | 1.15e-07 | 7 |
comma-shaped body | 1.15e-07 | 7 |