FFCP PHASE1:Hg19::chr4:174254864..174254925,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr4:174254864..174254925,- to FFCP PHASE1:Hg19::chr4:174254864..174254925,-: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3148 | |EntrezGene=3148 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5000 | |HGNC=5000 | ||
|TSSclassifier=strong | |||
|UniProt=P26583 | |UniProt=P26583 | ||
|association_with_transcript=0bp_to_NM_001130689,uc011ckc.1_5end | |||
|cluster_id=chr4:174254864..174254925,- | |||
|coexpression_cluster_id=C4393 | |||
|description=CAGE_peak_3_at_HMGB2_5end | |||
|id=chr4:174254864..174254925,- | |||
|ontology_enrichment_celltype=CL:0000542!8.20e-08!53;CL:0000051!8.20e-08!53;CL:0000838!2.14e-07!52 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,1.20e-09,53;CL:0000051,1.20e-09,53;CL:0000838,3.98e-09,52 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.44e-17!235;DOID:14566!8.97e-17!239;DOID:2531!1.49e-15!51;DOID:0060083!1.49e-15!51;DOID:0050686!1.06e-14!137;DOID:1240!2.57e-12!39;DOID:8692!6.78e-09!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;1.15e-11;39!DOID:2531;1.40e-11;51!DOID:0060083;1.40e-11;51!DOID:8692;3.05e-10;31 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,9.75e-19,51;DOID:0060083,9.75e-19,51;DOID:1240,7.20e-15,39;DOID:0050686,1.17e-14,137;DOID:162,2.90e-14,235;DOID:14566,4.14e-13,239;DOID:8692,6.70e-11,31 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.181678379270557,0,0,1.0007329835313,0,0,0,0,0,0.737201809504527,0,4.58726881473362,0.791300934685361,0.37129905888014,0.331397375727916,0,0,0.730310090387373,0,4.67860020691794,4.28401451612931,1.25381888591235,2.86235987131057,5.33810257784248,3.38965126905968,6.18948586558405,7.06065069269533,6.37557328640802,1.96682138424452,1.15148819429164,0.309632246632152,0,0.30120591877825,0,7.51431845628926,1.56386155736164,3.52320527201817,0,0.601633342410425,0.217010870715852,0.447830948479849,0,0.257575567634187,0.726991193897824,0.377875943688809,0,0.232429036905685,0,0,0,0,0,0,0,1.35426486594342,0.188242339542605,0.818718450173537,0,0.306083892370903,0,0,0,0.797854630486527,0.426224750532694,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0.838634582033504,1.12328631146495,0.600707571366025,1.92870704036496,0.285012743741249,0.19891667719909,0.182664153764634,1.75996244461323,2.73069305631066,0,0.426730222566507,0,1.14950487990897,0,0,0,0.587237189370939,0,1.32171328579026,1.12101712596307,5.00429761072646,1.37696839079683,0.786021525498329,1.23360899399706,3.34372990781356,1.62961133316795,0.473447805734733,1.94826728407911,6.23898558556972,2.06224135232386,1.99380505125259,1.89562704635511,7.55738786381483,8.9740949816316,11.675091226861,11.3303507292198,7.82468331484642,0.296573126324121,0.535081656179426,0,13.0305744102201,6.89796888483458,3.4362744548263,3.28925599625354,1.27426165729639,4.55758417699493,1.90090408889675,2.10805166708882,2.17577238962511,2.49861453104692,1.65744076430812,4.92676798152628,0.604820229674197,0.534880391567015,1.01377082717959,0,0.670700859703636,0.12786256184353,0,0,0.579386075843295,2.3858578411533,0,3.59232305223458,0.886917589850256,0.790513071238134,0.523916301990851,0,0.741568885568859,0.324547393654683,0,0.132957960518865,0.238490624305342,2.28797964312051,0.371457501329565,1.39133685156694,0.860234595106124,2.08284300964557,0,0.419499436209906,1.10047216776027,0.208994966536811,1.03366703667732,1.77883131343355,1.00416183829401,1.61131726843659,0.760272105718513,1.46437234528902,2.57364156242108,0,2.94689103337463,2.69435247151404,3.71617885594963,0,3.79706263827252,1.28241220751285,0,0,0.872188104285069,0,1.51956613997496,0,0.573673241497627,0.709336764396714,0.560677600142307,1.06748995729705,0.24666754841716,0,0.269421344139376,1.79808093424805,1.36221684880438,0,1.87457145467037,0.624320153660641,0,0.448346041655403,2.93586246609412,3.72307772046703,3.93262258766296,0.61246251376468,4.17636678860011,0.516628905878827,1.18800285728205,0.494533858557114,1.82032272387605,0,4.71341119071385,4.25402967564678,1.6623846929051,3.07284334616587,1.5324389789951,0.901428353439581,2.1552114800404,0.717558542755448,0,0.423863802319124,0.300091096084402,0.618315175430633,0,0.18611685633159,0.675105328965065,1.94874010322397,0,0.184099797284599,0.323292113637624,0,2.01504196455281,2.03472710772585,0.386521706326594,0,0,0.365921118388786,1.06023814657188,0.580969714347592,0.829288440122964,0.756962552626885,0.72995471815166,1.56449532329816,0,1.38134921352481,0.928735856063958,0.721879481669586,0.946454400318751,0.674338760312407,1.44606617930089,1.54411561825352,0.435758888184812,1.18635309555548,0.943819157121151,2.15843611637881,1.15424147083917,5.90524363699719,0,0.8231480226628,0,0,0,0,8.38779888887836,0.860919069801795,1.02940686179115,0.109750285408626,0,0.804231779293047,0.833296006426766,1.95484983186195,1.03993478527958,0,1.62302566965108,0.234817388471643,1.29929802984966,0.925971025153221,0.951270761172991,0.790204397959275,0,0.984868024349589,0.468008530278475,1.48631162288728,0,0,0.141775097242386,0.358234090811393,0,0.383382679165211,3.94130590316755,4.0502279646084,0.621984346622316,0.576479813667846,0.6312121671319,2.73040945456327,0.381988425558278,1.17217447210047,0,2.77634230298973,1.50171528921959,0.571652865261156,2.91540819297938,2.1798003441664,3.44689943358465,0,0,1.690605505112,0,0,2.05765899409714,1.41849132023278,1.5985330740966,0.285955987316295,0,0,0.977208552881205,0.355391948742546,1.58390374586686,0.301439377059586,0,0.399891964728228,0,0,0,0.239624855491583,0,2.85273810081437,0.289562613335158,1.43833425785268,0.358121926479791,7.17344921558575,1.18218456121156,1.07813787429759,1.54011643535698,2.28685161800217,2.60279707715243,1.54657762555539,1.34013012267479,0.637938751653163,0.749007023947182,2.99161459204025,3.31532410748828,0.981531933753119,0,0.813795071099207,0,0,0.315404830067869,0.468565659970853,0,0,1.03473071292505,4.64957918974806,0.553107505625109,1.39013783148933,0.195801157462741,0,2.06768026122887,0.431428401637234,0.74709290462411,0.606255142892519,1.66435439510497,2.41912234663744,0,0,0,0,0,0,0,1.3878872442239,0.532685175939381,2.21743321237285,0.519254429183621,2.32420756919918,0.120859449591622,0.200506470303285,0.0920809889358963,0.803701137152247,1.82091168006717,0.262248829918848,0,1.69433741629712,0.784349769176855,0,1.68882606228601,2.27466768141793,1.19065593693561,1.29549549661284,1.54227252690289,1.89662506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| ||
|short_description=p3@HMGB2 | |||
}} | }} |
Latest revision as of 19:06, 16 September 2015
Short description: | p3@HMGB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_HMGB2_5end |
Coexpression cluster: | C4393_Reticulocytes_Burkitt_Dendritic_non_lymphoma_acute_NK |
Association with transcript: | 0bp_to_NM_001130689, uc011ckc.1_5end |
EntrezGene: | HMGB2 |
HGNC: | 5000 |
UniProt: | P26583 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 1.20e-09 | 53 |
common lymphoid progenitor | 1.20e-09 | 53 |
lymphoid lineage restricted progenitor cell | 3.98e-09 | 52 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 9.75e-19 | 51 |
immune system cancer | 9.75e-19 | 51 |
leukemia | 7.20e-15 | 39 |
organ system cancer | 1.17e-14 | 137 |
cancer | 2.90e-14 | 235 |
disease of cellular proliferation | 4.14e-13 | 239 |
myeloid leukemia | 6.70e-11 | 31 |