FFCP PHASE1:Hg19::chr5:60608545..60608547,+: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr5:60608545..60608547,+ to FFCP PHASE1:Hg19::chr5:60608545..60608547,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr5:60608545..60608547,+ | |||
|description=CAGE_peak_at_chr5:60608545..60608547,+ | |||
|id=chr5:60608545..60608547,+ | |||
|ontology_enrichment_celltype=CL:0002139!4.68e-16!24;CL:0000071!1.46e-12!18;CL:0002546!1.46e-12!18;CL:1000413!6.43e-12!9;CL:0000115!1.23e-10!35;CL:0002544!1.92e-10!6;CL:0002564!9.54e-10!3;CL:0002078!3.21e-08!44;CL:0000342!1.69e-07!1;CL:0002565!1.69e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0002544;8.35e-34;6!CL:0000071;1.59e-25;18!CL:1000413;5.74e-23;9!CL:0002139;2.06e-19;24!CL:0000115;4.77e-11;36!CL:0002078;1.55e-10;45!CL:0002543;1.38e-09;6!CL:0000213;3.85e-08;58!CL:0000215;3.85e-08;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0002544,9.87e-34,6;CL:0000071,1.81e-25,18;CL:0002546,1.81e-25,18;CL:1000413,6.41e-23,9;CL:0002139,2.27e-19,24;CL:0000115,3.02e-13,36;CL:0002078,8.78e-11,45;CL:0002543,1.44e-09,6;CL:0000213,1.46e-08,58;CL:0000215,1.46e-08,58;CL:0000076,6.00e-08,63 | |||
|ontology_enrichment_development_v019=CL:0002546;1.59e-25;18!UBERON:0007123;3.10e-11;5 | |||
|ontology_enrichment_disease=DOID:2394!5.66e-11!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!1.46e-12!18;UBERON:0004638!1.46e-12!18;UBERON:0004852!1.46e-12!18;UBERON:0003915!6.43e-12!9;UBERON:0004700!6.43e-12!9;UBERON:0001917!6.43e-12!9;UBERON:0000487!3.57e-10!22;UBERON:0002242!9.54e-10!3;UBERON:0003068!9.54e-10!3;UBERON:0002328!9.54e-10!3;UBERON:0004880!9.54e-10!3;UBERON:0002049!2.66e-09!79;UBERON:0007798!2.66e-09!79;UBERON:0000055!3.62e-09!69;UBERON:0006914!6.99e-09!25;UBERON:0005705!9.44e-08!1;UBERON:0008193!9.44e-08!1;UBERON:0002514!9.44e-08!1;UBERON:0003462!9.44e-08!1;UBERON:0008001!9.44e-08!1;UBERON:0007914!9.44e-08!1;UBERON:0003457!9.44e-08!1;UBERON:0009292!9.44e-08!1;UBERON:0007375!9.44e-08!1;UBERON:0003323!9.44e-08!1;UBERON:0002397!9.44e-08!1;UBERON:0001709!9.44e-08!1;UBERON:0004066!9.44e-08!1;UBERON:0002244!9.44e-08!1;UBERON:0005620!9.44e-08!1;UBERON:0004068!9.44e-08!1;UBERON:0004362!9.44e-08!1;UBERON:0002506!1.69e-07!1;UBERON:0001769!1.69e-07!1;UBERON:0004535!3.16e-07!110;UBERON:0001981!3.24e-07!60;UBERON:0007500!3.24e-07!60;UBERON:0004537!3.24e-07!60;UBERON:0006965!3.24e-07!60;UBERON:0002119!4.76e-07!4;UBERON:0004531!4.76e-07!4;UBERON:0001009!5.70e-07!113;UBERON:0001638!8.55e-07!9;UBERON:0003920!8.55e-07!9;UBERON:0004582!8.55e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.59e-25;18!UBERON:0001986;1.59e-25;18!UBERON:0004852;1.59e-25;18!UBERON:0003915;5.74e-23;9!UBERON:0004700;5.74e-23;9!UBERON:0001917;5.74e-23;9!UBERON:0000487;4.42e-21;22!UBERON:0006914;1.12e-18;25!UBERON:0000490;9.84e-16;33!UBERON:0002046;3.10e-11;5!UBERON:0000947;1.69e-10;21!UBERON:0010191;1.69e-10;21!UBERON:0007500;8.10e-08;56!UBERON:0001981;8.10e-08;56!UBERON:0004537;8.10e-08;56!UBERON:0004573;1.17e-07;33!UBERON:0004571;1.17e-07;33!UBERON:0001638;8.14e-07;9!UBERON:0003920;8.14e-07;9!UBERON:0004582;8.14e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,1.81e-25,18;UBERON:0001986,1.81e-25,18;UBERON:0004852,1.81e-25,18;UBERON:0003915,6.41e-23,9;UBERON:0004700,6.41e-23,9;UBERON:0001917,6.41e-23,9;UBERON:0000487,4.90e-21,22;UBERON:0006914,1.23e-18,25;UBERON:0002046,2.66e-11,5;UBERON:0004117,2.66e-11,5;UBERON:0007689,2.66e-11,5;UBERON:0007123,2.66e-11,5;UBERON:0003091,2.66e-11,5;UBERON:0000947,1.77e-10,21;UBERON:0010191,1.77e-10,21;UBERON:0007500,1.98e-08,59;UBERON:0001981,1.98e-08,59;UBERON:0004537,1.98e-08,59;UBERON:0006965,1.98e-08,59;UBERON:0000055,2.01e-07,68;UBERON:0004573,4.89e-07,33;UBERON:0004571,4.89e-07,33;UBERON:0001638,8.37e-07,9;UBERON:0003920,8.37e-07,9;UBERON:0004582,8.37e-07,9 | |||
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|short_description=p@chr5:60608545..60608547,+ | |||
}} | }} |
Latest revision as of 15:37, 30 July 2015
Short description: | p@chr5:60608545..60608547, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:60608545..60608547, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
aortic endothelial cell | 9.87e-34 | 6 |
blood vessel endothelial cell | 1.81e-25 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.81e-25 | 18 |
endothelial cell of artery | 6.41e-23 | 9 |
endothelial cell of vascular tree | 2.27e-19 | 24 |
endothelial cell | 3.02e-13 | 36 |
meso-epithelial cell | 8.78e-11 | 45 |
vein endothelial cell | 1.44e-09 | 6 |
lining cell | 1.46e-08 | 58 |
barrier cell | 1.46e-08 | 58 |
squamous epithelial cell | 6.00e-08 | 63 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 1.81e-25 | 18 |
endothelium | 1.81e-25 | 18 |
cardiovascular system endothelium | 1.81e-25 | 18 |
endothelial tube | 6.41e-23 | 9 |
arterial system endothelium | 6.41e-23 | 9 |
endothelium of artery | 6.41e-23 | 9 |
simple squamous epithelium | 4.90e-21 | 22 |
squamous epithelium | 1.23e-18 | 25 |
thyroid gland | 2.66e-11 | 5 |
pharyngeal pouch | 2.66e-11 | 5 |
thyroid diverticulum | 2.66e-11 | 5 |
pharyngeal pouch 2 | 2.66e-11 | 5 |
thyroid primordium | 2.66e-11 | 5 |
aorta | 1.77e-10 | 21 |
aortic system | 1.77e-10 | 21 |
epithelial tube open at both ends | 1.98e-08 | 59 |
blood vessel | 1.98e-08 | 59 |
blood vasculature | 1.98e-08 | 59 |
vascular cord | 1.98e-08 | 59 |
vessel | 2.01e-07 | 68 |
systemic artery | 4.89e-07 | 33 |
systemic arterial system | 4.89e-07 | 33 |
vein | 8.37e-07 | 9 |
venous blood vessel | 8.37e-07 | 9 |
venous system | 8.37e-07 | 9 |