FFCP PHASE1:Hg19::chr6:26383404..26383454,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:26383404..26383454,+ to FFCP PHASE1:Hg19::chr6:26383404..26383454,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10385 | |EntrezGene=10385 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1137 | |HGNC=1137 | ||
|TSSclassifier=strong | |||
|UniProt=Q8WVV5,F8WC65,C9JAJ6 | |UniProt=Q8WVV5,F8WC65,C9JAJ6 | ||
|association_with_transcript=0bp_to_ENST00000416795,ENST00000471116,ENST00000494184,NM_001197237,uc003nhs.2_5end | |||
|cluster_id=chr6:26383404..26383454,+ | |||
|description=CAGE_peak_2_at_BTN2A2_5end | |||
|id=chr6:26383404..26383454,+ | |||
|ontology_enrichment_celltype=CL:0000220!2.75e-21!246;CL:0002321!2.89e-21!248;CL:0000548!5.72e-15!679;CL:0000004!5.72e-15!679;CL:0000255!5.72e-15!679;CL:0000012!1.54e-14!682;CL:0000144!3.83e-14!625;CL:0000222!8.27e-13!119;CL:0002371!8.71e-12!591;CL:0000055!1.06e-11!180;CL:0000359!1.82e-09!32;CL:0000221!2.26e-08!71;CL:0000213!1.64e-07!57;CL:0000215!1.64e-07!57;CL:0000133!1.97e-07!59;CL:0000393!4.44e-07!60;CL:0000211!4.44e-07!60;CL:0000076!8.11e-07!62 | |||
|ontology_enrichment_celltype_v019=CL:0000359;7.74e-10;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.83e-20,250;CL:0000222,2.66e-12,121;CL:0000359,1.09e-09,32;CL:0000221,1.01e-08,72;CL:0000133,1.42e-07,59;CL:0000213,5.59e-07,58;CL:0000215,5.59e-07,58;CL:0000393,5.84e-07,61;CL:0000211,5.84e-07,61 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!1.62e-13!79;UBERON:0007798!1.62e-13!79;UBERON:0000055!6.19e-13!69;UBERON:0001981!1.09e-10!60;UBERON:0007500!1.09e-10!60;UBERON:0004537!1.09e-10!60;UBERON:0006965!1.09e-10!60;UBERON:0001637!2.26e-10!42;UBERON:0003509!2.26e-10!42;UBERON:0004572!2.26e-10!42;UBERON:0004573!1.71e-09!33;UBERON:0004571!1.71e-09!33;UBERON:0004535!2.56e-07!110;UBERON:0004872!6.71e-07!84 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;2.10e-08;33!UBERON:0004571;2.10e-08;33!UBERON:0001637;1.54e-07;42!UBERON:0003509;1.54e-07;42!UBERON:0004572;1.54e-07;42!UBERON:0002049;3.22e-07;75!UBERON:0007798;3.22e-07;75!UBERON:0000055;4.83e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,2.43e-13,78;UBERON:0007798,2.43e-13,78;UBERON:0000055,1.59e-12,68;UBERON:0001637,7.79e-11,42;UBERON:0003509,7.79e-11,42;UBERON:0004572,7.79e-11,42;UBERON:0007500,2.54e-10,59;UBERON:0001981,2.54e-10,59;UBERON:0004537,2.54e-10,59;UBERON:0006965,2.54e-10,59;UBERON:0004573,7.04e-10,33;UBERON:0004571,7.04e-10,33;UBERON:0004535,9.60e-08,109;UBERON:0001009,6.91e-07,112 | |||
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| ||
|short_description=p2@BTN2A2 | |||
}} | }} |
Latest revision as of 09:49, 17 September 2015
Short description: | p2@BTN2A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_BTN2A2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000416795, ENST00000471116, ENST00000494184, NM_001197237, uc003nhs.2_5end |
EntrezGene: | BTN2A2 |
HGNC: | 1137 |
UniProt: | Q8WVV5F8WC65C9JAJ6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.83e-20 | 250 |
mesodermal cell | 2.66e-12 | 121 |
vascular associated smooth muscle cell | 1.09e-09 | 32 |
ectodermal cell | 1.01e-08 | 72 |
neurectodermal cell | 1.42e-07 | 59 |
lining cell | 5.59e-07 | 58 |
barrier cell | 5.59e-07 | 58 |
electrically responsive cell | 5.84e-07 | 61 |
electrically active cell | 5.84e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
vasculature | 2.43e-13 | 78 |
vascular system | 2.43e-13 | 78 |
vessel | 1.59e-12 | 68 |
artery | 7.79e-11 | 42 |
arterial blood vessel | 7.79e-11 | 42 |
arterial system | 7.79e-11 | 42 |
epithelial tube open at both ends | 2.54e-10 | 59 |
blood vessel | 2.54e-10 | 59 |
blood vasculature | 2.54e-10 | 59 |
vascular cord | 2.54e-10 | 59 |
systemic artery | 7.04e-10 | 33 |
systemic arterial system | 7.04e-10 | 33 |
cardiovascular system | 9.60e-08 | 109 |
circulatory system | 6.91e-07 | 112 |