FFCP PHASE1:Hg19::chr6:3410707..3410744,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr6:3410707..3410744,- | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_at_chr6:3410707..3410744,- | |||
|id=chr6:3410707..3410744,- | |||
|ontology_enrichment_celltype=CL:0000764!3.35e-12!2;CL:0000765!3.35e-12!2;CL:0000050!3.35e-12!2;CL:0000038!3.35e-12!2;CL:0000558!3.35e-12!2;CL:0000547!3.35e-12!2;CL:0000549!3.35e-12!2;CL:0000550!3.35e-12!2;CL:0000552!3.35e-12!2;CL:0000181!2.78e-11!12;CL:0000417!2.78e-11!12;CL:0000668!2.78e-11!12;CL:0000414!2.78e-11!12;CL:0000412!2.78e-11!12;CL:0000182!2.78e-11!12 | |||
|ontology_enrichment_celltype_v019=CL:0000764;2.99e-10;2!CL:0000558;2.99e-10;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,3.58e-10,2;CL:0000765,3.58e-10,2;CL:0000050,3.58e-10,2;CL:0000038,3.58e-10,2;CL:0000558,3.58e-10,2;CL:0000547,3.58e-10,2;CL:0000549,3.58e-10,2;CL:0000550,3.58e-10,2;CL:0000552,3.58e-10,2 | |||
|ontology_enrichment_development_v019=UBERON:0006242;3.91e-19;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.42e-18!27;UBERON:0000059!3.49e-18!11;UBERON:0001155!9.29e-16!9;UBERON:0005409!5.01e-14!35;UBERON:0009854!8.55e-11!23;UBERON:0004907!1.25e-10!5;UBERON:0009497!6.86e-10!25;UBERON:0000015!6.86e-10!25;UBERON:0002423!6.86e-10!25;UBERON:0006235!6.86e-10!25;UBERON:0004161!6.86e-10!25;UBERON:0002107!8.37e-10!19;UBERON:0006925!8.37e-10!19;UBERON:0008836!8.37e-10!19;UBERON:0009856!1.91e-09!26;UBERON:0005057!2.64e-09!26;UBERON:0004921!1.13e-08!129;UBERON:0004185!1.13e-08!129;UBERON:0008835!2.18e-08!22;UBERON:0003894!2.18e-08!22;UBERON:0001007!1.18e-07!155;UBERON:0001555!1.18e-07!155;UBERON:0007026!1.18e-07!155;UBERON:0004119!1.20e-07!169;UBERON:0000925!1.20e-07!169;UBERON:0006595!1.20e-07!169;UBERON:0007499!2.60e-07!25;UBERON:0001154!5.89e-07!1;UBERON:0001153!5.89e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;2.15e-25;17!UBERON:0005409;6.39e-20;22!UBERON:0001155;6.40e-19;9!UBERON:0000059;1.31e-15;11!UBERON:0002108;1.45e-15;4!UBERON:0004921;3.50e-12;33!UBERON:0002114;2.47e-07;2!UBERON:0002110;2.97e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.20e-25,17;UBERON:0001155,6.80e-19,9;UBERON:0005409,1.23e-17,25;UBERON:0000059,1.38e-15,11;UBERON:0002108,1.40e-15,4;UBERON:0002114,2.47e-07,2;UBERON:0002110,2.79e-07,3;UBERON:0006242,2.79e-07,3 | |||
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|short_description=p@chr6:3410707..3410744,- | |||
}} | }} |
Latest revision as of 00:49, 31 July 2015
Short description: | p@chr6:3410707..3410744, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:3410707..3410744, - |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 3.58e-10 | 2 |
erythroblast | 3.58e-10 | 2 |
megakaryocyte-erythroid progenitor cell | 3.58e-10 | 2 |
erythroid progenitor cell | 3.58e-10 | 2 |
reticulocyte | 3.58e-10 | 2 |
proerythroblast | 3.58e-10 | 2 |
basophilic erythroblast | 3.58e-10 | 2 |
polychromatophilic erythroblast | 3.58e-10 | 2 |
orthochromatic erythroblast | 3.58e-10 | 2 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.20e-25 | 17 |
colon | 6.80e-19 | 9 |
gastrointestinal system | 1.23e-17 | 25 |
large intestine | 1.38e-15 | 11 |
small intestine | 1.40e-15 | 4 |
duodenum | 2.47e-07 | 2 |
gallbladder | 2.79e-07 | 3 |
gall bladder primordium | 2.79e-07 | 3 |