FFCP PHASE1:Hg19::chr6:43738506..43738520,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:43738506..43738520,+ to FFCP PHASE1:Hg19::chr6:43738506..43738520,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7422 | |EntrezGene=7422 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12680 | |HGNC=12680 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000372077_5end | |||
|cluster_id=chr6:43738506..43738520,+ | |||
|description=CAGE_peak_2_at_VEGFA_5end | |||
|id=chr6:43738506..43738520,+ | |||
|ontology_enrichment_celltype=CL:0000055!5.67e-12!180;CL:0000057!3.76e-09!75;CL:0000359!1.65e-07!32;CL:0000192!7.22e-07!42;CL:0000514!7.22e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000359;3.95e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.06e-09,76;CL:0000359,1.49e-07,32;CL:0000192,4.90e-07,43;CL:0000514,4.90e-07,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002100!1.62e-12!216;UBERON:0003104!1.63e-12!238;UBERON:0009142!1.63e-12!238;UBERON:0000926!1.05e-10!448;UBERON:0004120!1.05e-10!448;UBERON:0006603!1.05e-10!448;UBERON:0005256!1.07e-10!143;UBERON:0000468!2.04e-09!659;UBERON:0000481!5.67e-09!347;UBERON:0000480!7.76e-09!626;UBERON:0000467!1.03e-08!625;UBERON:0003914!2.66e-08!118;UBERON:0000062!3.50e-08!511;UBERON:0001048!2.41e-07!168;UBERON:0000475!2.63e-07!365;UBERON:0001007!9.05e-07!155;UBERON:0001555!9.05e-07!155;UBERON:0007026!9.05e-07!155 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,8.90e-12,199;UBERON:0003104,2.30e-10,160;UBERON:0009142,2.30e-10,160;UBERON:0005256,1.02e-09,122;UBERON:0003914,6.75e-08,117 | |||
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| ||
|short_description=p2@VEGFA | |||
}} | }} |
Latest revision as of 22:57, 18 September 2015
Short description: | p2@VEGFA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_VEGFA_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000372077_5end |
EntrezGene: | VEGFA |
HGNC: | 12680 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.06e-09 | 76 |
vascular associated smooth muscle cell | 1.49e-07 | 32 |
smooth muscle cell | 4.90e-07 | 43 |
smooth muscle myoblast | 4.90e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
trunk | 8.90e-12 | 199 |
mesenchyme | 2.30e-10 | 160 |
entire embryonic mesenchyme | 2.30e-10 | 160 |
trunk mesenchyme | 1.02e-09 | 122 |
epithelial tube | 6.75e-08 | 117 |