FFCP PHASE1:Hg19::chr6:75915872..75915881,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:75915872..75915881,- to FFCP PHASE1:Hg19::chr6:75915872..75915881,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1303 | |EntrezGene=1303 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2188 | |HGNC=2188 | ||
|TSSclassifier=strong | |||
|UniProt=Q99715 | |UniProt=Q99715 | ||
|association_with_transcript=-105bp_to_ENST00000322507_5end | |||
|cluster_id=chr6:75915872..75915881,- | |||
|coexpression_cluster_id=C1280 | |||
|description=CAGE_peak_3_at_COL12A1_5end | |||
|id=chr6:75915872..75915881,- | |||
|ontology_enrichment_celltype=CL:0000055!1.70e-25!180;CL:0000057!3.94e-21!75;CL:0002620!4.53e-10!23;CL:0000136!8.95e-07!15;CL:0000499!9.18e-07!27 | |||
|ontology_enrichment_celltype_v019=CL:0002620;4.32e-10;23!CL:0000057;2.25e-09;73!CL:0000349;2.95e-09;19!CL:0002320;1.85e-08;188!CL:0002334;1.52e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.80e-23,76;CL:0002620,4.66e-10,23;CL:0000349,2.99e-09,19;CL:0002334,1.41e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004923!4.09e-10!57;UBERON:0000475!4.91e-10!365;UBERON:0003102!4.93e-10!95;UBERON:0000468!5.97e-09!659;UBERON:0005256!7.36e-09!143;UBERON:0000914!8.62e-08!83;UBERON:0002329!8.62e-08!83;UBERON:0003077!8.62e-08!83;UBERON:0003059!8.62e-08!83;UBERON:0007282!8.62e-08!83;UBERON:0009618!8.62e-08!83;UBERON:0007285!8.62e-08!83;UBERON:0002100!1.61e-07!216;UBERON:0002199!2.73e-07!45;UBERON:0002416!2.73e-07!45;UBERON:0000481!3.64e-07!347;UBERON:0005631!8.99e-07!14;UBERON:0000158!8.99e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0002384;4.66e-08;198!UBERON:0000478;4.35e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004923,1.94e-10,66;UBERON:0003102,1.18e-07,99;UBERON:0002199,1.99e-07,46;UBERON:0002416,1.99e-07,46;UBERON:0000478,4.37e-07,24;UBERON:0002097,4.48e-07,41;UBERON:0005631,8.23e-07,14;UBERON:0000158,8.23e-07,14 | |||
|phase1_expression=40.8776353358752,28.0471686297188,29.318516051962,26.0190575718139,22.7950158157917,27.9148327712118,5.06599756336621,0.631719873426831,1.30592814099919,0.491467873003018,0,5.67947567538448,2.11013582582763,1.73272894144065,3.97676850873499,0,0.602694528023977,0,0.487932798790507,1.47745269692145,1.83600622119828,1.25381888591235,0,1.23186982565596,0.627713197974014,0,0,0,0,0,2.63187409637329,0.919421224478927,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,1.34140171940727,3.32442660793179,12.6503703334598,6.51739283826656,14.774344934004,7.95285947051099,15.0856809793817,18.9069634328136,17.9600811944677,27.9314618504141,2.42311289670768,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0.417989933073621,0.516833518338658,1.42306505074684,1.33888245105868,0.402829317109147,0,0,0,3.24056779152704,0.446498641420399,0.673588117878509,0.337834441449967,0,1.89853131913626,0.183201743930407,0,0,0,39.7577561356255,1.8994576749687,1.05927344650575,4.87622255272983,1.06400514659507,1.68203280042692,0,1.2333377420858,2.8008993185979,1.48181739276657,2.61539044981534,2.4217188423189,2.30470369792,2.81185718200556,0.624320153660641,0,0.149448680551801,6.57633192405083,6.151171885989,7.86524517532592,2.44985005505872,4.05353247128834,1.54988671763648,14.2560342873846,4.94533858557114,2.73048408581408,1.43723628363248,5.89176398839232,7.88246675193374,2.49357703935765,10.0964852802593,5.21029252858333,6.00952235626387,3.28953331164061,79.4696086101658,87.9856441932498,20.3454625113179,23.4071054945834,23.7020817248409,120.8334132814,78.7274302282625,23.2911338492947,18.2207199651441,37.8650661366172,43.2634523618807,16.1646056818812,83.782263833921,27.5053228161458,9.49539316938731,1.54608682530637,2.18196896472668,1.43402297694502,0.121973706129595,0.397589304964456,0.232387885739037,0.932949495138334,0.504641701751257,0.72995471815166,0,8.36213219650751,2.76269842704961,1.85747171212792,0,1.53798840051797,1.51726221070292,0.964044119533928,1.21323370005633,1.52515610864684,0.474541238222193,1.07865046528132,1.37355025587742,0.38474715694639,0,1.40241773803446,0.4115740113314,2.94017422771084,0,0,0,0,0.860919069801795,3.43135620597051,2.52425656439839,0,1.00528972411631,0.185176890317059,3.25808305310325,1.03993478527958,7.21656710126366,12.9842053572086,22.6598779875136,0.144366447761074,0,1.52203321787679,0.790204397959275,0.858486162094873,0,0,0,0,2.51973192298289,0.850650583454319,0.53735113621709,1.45316969256981,2.30029607499127,0,0,0,0,0,0.190493682876507,0,0,1.71072446022705,0.719792448923265,0.600686115687835,0,1.45770409648969,1.30788020649984,2.56684000373325,16.0296927539644,0,4.22651376278,14.6265964121679,11.4408180602503,0.771622122786426,1.41849132023278,0,4.43231780340257,5.42621605391443,4.93944202068461,1.30294473717494,4.6200953336531,0,0,0.871533458600294,0,0,0,0,2.39624855491583,6.89171615004683,2.85273810081437,1.15825045334063,1.2328579353023,0.358121926479791,0,0,0,0,0.76228387266739,0,0,0.335032530668698,0.637938751653163,0,0,0,4.78496817704646,0,0.813795071099207,8.11086359970148,7.85087550707512,9.93525214713788,13.2369798941766,10.8340595901979,2.27407504055985,0,9.96338397803155,9.03408925854345,2.25897397617015,1.37060810223918,2.40200396667599,0,0,0,6.36567900037145,11.6504807657348,19.9577593597589,52.1026396419431,195.510553968992,45.1862752037248,17.8113417465424,36.8429219328026,35.7095704938809,16.325987308949,1.54209693802656,1.42049380250502,2.54594183642808,2.07701771673448,1.62694529843943,1.32945394550784,2.80709058424599,0.184161977871793,2.75554675595056,0.728364672026868,0.655622074797121,0.451199612907412,1.61732207919271,1.56869953835371,1.46139224653261,0.633309773357254,1.13733384070897,1.02056223165909,6.0456456508599,0,3.79325012561394,1.50506932156456,0.254876273045038,0,1.56712328305525,0,0,3.59030175162945,1.64007322849853,0.325378394664303,0.103041011647722,23.8996303175876,26.238020974747,1.72279661398852,0,0,1.93341436584244,1.23238893691716,1.5350367472613,1.37836572484531,2.14840489736547,2.0302337147992,1.78975917573812,4.71869788927708,0,0,0,0.30347334256665,0,5.66662224295152,3.485186350803,0.924100740528266,0.532306030317022,0,0.55597265731176,0.429374660225974,3.34942532423701,0.632758849437452,3.0500831027812,0,2.56763392820352,1.27281299170375,0,8.81375042158242,6.86342574340137,6.47968212901275,0.808729926293264,0,1.26377536871694,1.95053495635836,0.243713489631284,1.05650146756755,7.50749512743922,6.50464986987079,0,3.85955740482287,1.32687795048244,0.876901770507525,0,0.655894752046633,1.62328301570163,0.30982349809975,2.25356482025793,8.17444707563094,13.0671224547451,0.7133421029625,4.25713276884717,4.43326034125095,2.96365403663912,1.13841952129715,6.64875968465468,0.0962221127255121,0,0,0.188287601553558,0,0,0,0.229723400206959,0,0,0,0,0,0,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| ||
|short_description=p3@COL12A1 | |||
}} | }} |
Latest revision as of 20:34, 19 September 2015
Short description: | p3@COL12A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_COL12A1_5end |
Coexpression cluster: | C1280_Preadipocyte_Fibroblast_Adipocyte_leiomyoblastoma_Ewing_Chondrocyte_spindle |
Association with transcript: | -105bp_to_ENST00000322507_5end |
EntrezGene: | COL12A1 |
HGNC: | 2188 |
UniProt: | Q99715 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.80e-23 | 76 |
skin fibroblast | 4.66e-10 | 23 |
extraembryonic cell | 2.99e-09 | 19 |
preadipocyte | 1.41e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
organ component layer | 1.94e-10 | 66 |
surface structure | 1.18e-07 | 99 |
integument | 1.99e-07 | 46 |
integumental system | 1.99e-07 | 46 |
extraembryonic structure | 4.37e-07 | 24 |
skin of body | 4.48e-07 | 41 |
extraembryonic membrane | 8.23e-07 | 14 |
membranous layer | 8.23e-07 | 14 |