FFCP PHASE1:Hg19::chr7:15601583..15601592,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=392636 | |EntrezGene=392636 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=33784 | |HGNC=33784 | ||
|TSSclassifier=strong | |||
|UniProt=Q6ZNB7 | |UniProt=Q6ZNB7 | ||
|association_with_transcript=47bp_to_ENST00000342526,NM_001004320,uc003stb.1_5end | |||
|cluster_id=chr7:15601583..15601592,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_4_at_AGMO_5end | |||
|id=chr7:15601583..15601592,- | |||
|ontology_enrichment_celltype=CL:0000181!8.19e-11!12;CL:0000417!8.19e-11!12;CL:0000668!8.19e-11!12;CL:0000414!8.19e-11!12;CL:0000412!8.19e-11!12;CL:0000182!8.19e-11!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;3.26e-13;12!CL:0002564;7.70e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.13e-13,12;CL:0002564,8.15e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0004161;6.45e-07;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!9.32e-11!19;UBERON:0006925!9.32e-11!19;UBERON:0008836!9.32e-11!19;UBERON:0009497!1.40e-09!25;UBERON:0000015!1.40e-09!25;UBERON:0002423!1.40e-09!25;UBERON:0006235!1.40e-09!25;UBERON:0004161!1.40e-09!25;UBERON:0008835!4.89e-09!22;UBERON:0003894!4.89e-09!22;UBERON:0009854!1.45e-08!23;UBERON:0007499!9.81e-08!25;UBERON:0005057!2.28e-07!26;UBERON:0009856!2.28e-07!26;UBERON:0005172!8.81e-07!55;UBERON:0005173!8.81e-07!55 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;6.63e-22;19!UBERON:0006925;6.63e-22;19!UBERON:0002423;1.11e-16;25!UBERON:0002365;1.88e-13;31!UBERON:0002330;1.88e-13;31!UBERON:0002368;1.15e-11;33!UBERON:0000949;1.49e-08;43!UBERON:0002242;7.70e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,6.49e-22,19;UBERON:0006925,6.49e-22,19;UBERON:0008836,6.49e-22,19;UBERON:0008835,6.01e-19,22;UBERON:0003894,6.01e-19,22;UBERON:0009854,3.95e-18,23;UBERON:0007499,1.09e-16,25;UBERON:0009497,1.09e-16,25;UBERON:0000015,1.09e-16,25;UBERON:0002423,1.09e-16,25;UBERON:0006235,1.09e-16,25;UBERON:0004161,1.09e-16,25;UBERON:0009856,4.72e-16,26;UBERON:0002365,1.77e-13,31;UBERON:0002330,1.77e-13,31;UBERON:0002368,6.04e-12,35;UBERON:0000949,2.69e-09,45;UBERON:0003929,9.56e-08,54;UBERON:0005172,9.56e-08,54;UBERON:0005173,9.56e-08,54;UBERON:0002530,4.36e-07,59;UBERON:0002417,5.74e-07,60;UBERON:0000916,5.74e-07,60;UBERON:0002242,8.15e-07,3;UBERON:0003068,8.15e-07,3;UBERON:0002328,8.15e-07,3;UBERON:0004880,8.15e-07,3 | |||
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| ||
|short_description=p4@AGMO | |||
}} | }} |
Latest revision as of 10:32, 17 September 2015
Short description: | p4@AGMO |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_AGMO_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 47bp_to_ENST00000342526, NM_001004320, uc003stb.1_5end |
EntrezGene: | AGMO |
HGNC: | 33784 |
UniProt: | Q6ZNB7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.13e-13 | 12 |
nucleus pulposus cell of intervertebral disc | 8.15e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
liver | 6.49e-22 | 19 |
digestive gland | 6.49e-22 | 19 |
liver bud | 6.49e-22 | 19 |
hepatic diverticulum | 6.01e-19 | 22 |
liver primordium | 6.01e-19 | 22 |
digestive tract diverticulum | 3.95e-18 | 23 |
epithelial sac | 1.09e-16 | 25 |
epithelium of foregut-midgut junction | 1.09e-16 | 25 |
anatomical boundary | 1.09e-16 | 25 |
hepatobiliary system | 1.09e-16 | 25 |
foregut-midgut junction | 1.09e-16 | 25 |
septum transversum | 1.09e-16 | 25 |
sac | 4.72e-16 | 26 |
exocrine gland | 1.77e-13 | 31 |
exocrine system | 1.77e-13 | 31 |
endocrine gland | 6.04e-12 | 35 |
endocrine system | 2.69e-09 | 45 |
gut epithelium | 9.56e-08 | 54 |
abdomen element | 9.56e-08 | 54 |
abdominal segment element | 9.56e-08 | 54 |
gland | 4.36e-07 | 59 |
abdominal segment of trunk | 5.74e-07 | 60 |
abdomen | 5.74e-07 | 60 |
nucleus pulposus | 8.15e-07 | 3 |
axial mesoderm | 8.15e-07 | 3 |
notochord | 8.15e-07 | 3 |
chordamesoderm | 8.15e-07 | 3 |