FFCP PHASE1:Hg19::chr7:27212407..27212421,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:27212407..27212421,- to FFCP PHASE1:Hg19::chr7:27212407..27212421,-: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3206 | |EntrezGene=3206 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5100 | |HGNC=5100 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=86bp_to_ENST00000519593,ENST00000521421_5end | |||
|cluster_id=chr7:27212407..27212421,- | |||
|description=CAGE_peak_9_at_HOXA10_5end | |||
|id=chr7:27212407..27212421,- | |||
|ontology_enrichment_celltype=CL:0002620!1.15e-11!23;CL:0000499!2.11e-08!27 | |||
|ontology_enrichment_celltype_v019=CL:0002540;2.32e-12;6!CL:0002092;1.28e-07;10!CL:0002537;1.63e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002540,1.54e-12,6;CL:0002092,1.01e-07,10;CL:0002537,1.77e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0009847;1.97e-11;3!UBERON:0003353;1.97e-11;3!UBERON:0005795;6.67e-08;10 | |||
|ontology_enrichment_disease=DOID:17!2.22e-08!5;DOID:450!2.22e-08!5;DOID:66!2.22e-08!5;DOID:423!2.22e-08!5;DOID:0080000!2.22e-08!5;DOID:11722!2.22e-08!5 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006554!3.01e-09!44;UBERON:0001008!6.19e-09!45;UBERON:0002367!2.89e-07!11;UBERON:0010147!2.89e-07!11;UBERON:0009846!2.89e-07!11;UBERON:0003353!2.89e-07!11;UBERON:0004902!2.89e-07!11;UBERON:0003820!2.89e-07!11;UBERON:0009847!2.89e-07!11;UBERON:0000162!5.26e-07!14;UBERON:0001353!5.26e-07!14;UBERON:0000163!5.26e-07!14;UBERON:0006866!5.26e-07!14;UBERON:0000164!5.26e-07!14;UBERON:0000931!5.26e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0005795;1.07e-09;1!UBERON:0006834;1.07e-09;1!UBERON:0004765;2.09e-07;26!UBERON:0011135;3.34e-07;5!UBERON:0002216;3.34e-07;5!UBERON:0011134;3.34e-07;5!UBERON:0002209;3.34e-07;5!UBERON:0002213;3.34e-07;5!UBERON:0007844;3.34e-07;5!UBERON:0011138;3.34e-07;5!UBERON:0001130;3.34e-07;5!UBERON:0001066;3.34e-07;5!UBERON:0001468;3.34e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006834,8.68e-10,1;UBERON:0011135,4.16e-07,5;UBERON:0002216,4.16e-07,5;UBERON:0011134,4.16e-07,5;UBERON:0002209,4.16e-07,5;UBERON:0002213,4.16e-07,5;UBERON:0005856,4.16e-07,5;UBERON:0005866,4.16e-07,5;UBERON:0005863,4.16e-07,5;UBERON:0007844,4.16e-07,5;UBERON:0011138,4.16e-07,5;UBERON:0001130,4.16e-07,5;UBERON:0001066,4.16e-07,5;UBERON:0001468,4.16e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0.618831764800233,1.32558950291166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.2529523714611,3.00802746381534,0.434539556882471,0,0,0,0,0,0.72038491523742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0,0.179389635688862,0.85422955527427,0.211931901159562,0.300091096084402,0.309157587715317,0.772921620136887,0.558350568994769,0,0.292311015483596,0,1.10459878370759,0,0.355009592516614,1.0075209822764,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0.241011029883482,0.110293972732394,0,0.237270619111097,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,2.12750493267896,3.12022310734098,1.80045161983499,0,1.8649552531127,0,1.62786481617433,0.823240336780769,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,1.00034104211935,0.813795071099207,0,0,0,0,1.20378439891088,0,0,0.664225598535437,0.368738337083406,0.695068915744663,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0,0.511707249066704,0,0,0.154209693802656,0,0,0,0.116210378459959,0,0,0,0.34444334449382,0.728364672026868,0.131124414959424,0,0,0,0,0.211103257785751,0,0,0,0,0.270946437543853,1.00337954770971,0.254876273045038,0,0.223874754722178,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0.154048617114644,0,0.137836572484531,0.107420244868274,0,0.255679882248303,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0.235624804691373,0,0,0,0,0,0,0.682499557039929,0.282810863907425,0,0,0,0,0,0,0,0,0,0.286822704408103,0.589494246078727,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0.199579371432817,0.191505370132367,0.211673582723883,0,0,0.228234679033192,0,0,0,0,0,0,0.343505344755765,0,0,0.500547425135725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0.520874984799877,0,0,0,0,0,0,0,0,3.92446318369365,0,0,0,0,0,0.549585560411174,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0.442287822516696,0,0,0,0,0,0,0,0,0,0,0.789168805698781,0,0,0,0.150323419414493,3.00695755052017,0,0,0,0,0.569219092059585,0,0,0,0,0.17472666824203,0,0.290268993867255,0,0.0821154570532092,0,0,0,0,0,0,0,0,0,0,0,0,0.343189995723929,0,0,0,2.31037150325144,2.61507115780833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472834243795189,1.52118305591495,0,0,0,0,0,0,0,0,1.63293680054705,0,0,0.340776043570843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0.378806010550178,1.25783950876288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0.368211900503681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.596748666348824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66847102838104,1.49136876415977,0,0,0.913158720509496,0,0,0,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205325613712494,0,0,0,3.18321240258189,0,0,0,0.452888530700021,0,0,0,0.490296643507811,0,0,0,0.4226557275834,0.169927114687817,0,0,0,0,0,0,0,0,0,0.315543124386369,0,0,0,0.743990036333503,0.462175628631418,0.432626562123789,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.78948476966886,3.66206560484165,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0.618831764800233,1.32558950291166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.2529523714611,3.00802746381534,0.434539556882471,0,0,0,0,0,0.72038491523742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0,0.179389635688862,0.85422955527427,0.211931901159562,0.300091096084402,0.309157587715317,0.772921620136887,0.558350568994769,0,0.292311015483596,0,1.10459878370759,0,0.355009592516614,1.0075209822764,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0.241011029883482,0.110293972732394,0,0.237270619111097,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,2.12750493267896,3.12022310734098,1.80045161983499,0,1.8649552531127,0,1.62786481617433,0.823240336780769,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,1.00034104211935,0.813795071099207,0,0,0,0,1.20378439891088,0,0,0.664225598535437,0.368738337083406,0.695068915744663,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0,0.511707249066704,0,0,0.154209693802656,0,0,0,0.116210378459959,0,0,0,0.34444334449382,0.728364672026868,0.131124414959424,0,0,0,0,0.211103257785751,0,0,0,0,0.270946437543853,1.00337954770971,0.254876273045038,0,0.223874754722178,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0.154048617114644,0,0.137836572484531,0.107420244868274,0,0.255679882248303,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0.235624804691373,0,0,0,0,0,0,0.682499557039929,0.282810863907425,0,0,0,0,0,0,0,0,0,0.286822704408103,0.589494246078727,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0.199579371432817,0.191505370132367,0.211673582723883,0,0,0.228234679033192,0,0,0,0,0,0,0.343505344755765,0,0,0.500547425135725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0.520874984799877,0,0,0,0,0,0,0,0,3.92446318369365,0,0,0,0,0,0.549585560411174,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0.442287822516696,0,0,0,0,0,0,0,0,0,0,0.789168805698781,0,0,0,0.150323419414493,3.00695755052017,0,0,0,0,0.569219092059585,0,0,0,0,0.17472666824203,0,0.290268993867255,0,0.0821154570532092,0,0,0,0,0,0,0,0,0,0,0,0,0.343189995723929,0,0,0,2.31037150325144,2.61507115780833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472834243795189,1.52118305591495,0,0,0,0,0,0,0,0,1.63293680054705,0,0,0.340776043570843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0.378806010550178,1.25783950876288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0.368211900503681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.596748666348824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66847102838104,1.49136876415977,0,0,0.913158720509496,0,0,0,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205325613712494,0,0,0,3.18321240258189,0,0,0,0.452888530700021,0,0,0,0.490296643507811,0,0,0,0.4226557275834,0.169927114687817,0,0,0,0,0,0,0,0,0,0.315543124386369,0,0,0,0.743990036333503,0.462175628631418,0.432626562123789,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.78948476966886,3.66206560484165,0,0,0 | ||
|short_description=p9@HOXA10 | |||
}} | }} |
Latest revision as of 01:49, 18 September 2015
Short description: | p9@HOXA10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_HOXA10_5end |
Coexpression cluster: | NA |
Association with transcript: | 86bp_to_ENST00000519593, ENST00000521421_5end |
EntrezGene: | HOXA10 |
HGNC: | 5100 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal stem cell of the bone marrow | 1.54e-12 | 6 |
bone marrow cell | 1.01e-07 | 10 |
amnion mesenchymal stem cell | 1.77e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
uterus or analog | 8.68e-10 | 1 |
intervertebral cartilage | 4.16e-07 | 5 |
symphysis | 4.16e-07 | 5 |
nonsynovial joint | 4.16e-07 | 5 |
fibrous joint | 4.16e-07 | 5 |
cartilaginous joint | 4.16e-07 | 5 |
developing mesenchymal condensation | 4.16e-07 | 5 |
pre-cartilage condensation | 4.16e-07 | 5 |
cartilaginous condensation | 4.16e-07 | 5 |
cartilage element | 4.16e-07 | 5 |
post-cranial axial skeletal system | 4.16e-07 | 5 |
vertebral column | 4.16e-07 | 5 |
intervertebral disk | 4.16e-07 | 5 |
intervertebral joint | 4.16e-07 | 5 |