FFCP PHASE1:Hg19::chr7:69432481..69432497,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:69432481..69432497,+ to FFCP PHASE1:Hg19::chr7:69432481..69432497,+: NSchange) |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr7:69432481..69432497,+ | |||
|description=CAGE_peak_at_chr7:69432481..69432497,+ | |||
|id=chr7:69432481..69432497,+ | |||
|ontology_enrichment_celltype=CL:0000064!1.48e-07!3;CL:0005012!1.48e-07!3;CL:0000067!1.48e-07!3;CL:0002304!1.48e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002549;1.53e-20;2!CL:0002575;1.68e-20;2!CL:0000064;1.12e-13;3!CL:0000067;1.12e-13;3!CL:0005012;1.12e-13;3!CL:0002304;1.12e-13;3!CL:0000669;9.98e-11;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002575,1.39e-20,2;CL:0002549,1.69e-20,2;CL:0000064,7.92e-14,3;CL:0000067,7.92e-14,3;CL:0005012,7.92e-14,3;CL:0002304,7.92e-14,3;CL:0000669,9.07e-11,4 | |||
|ontology_enrichment_development_v019=UBERON:0004140;2.79e-11;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1287;4.62e-22;4!DOID:114;1.16e-19;2!DOID:2355;2.53e-11;1!DOID:178;1.05e-10;1!DOID:326;1.05e-10;1!DOID:3978;1.05e-10;1!DOID:3394;1.05e-10;1!DOID:5844;1.05e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1287,5.74e-22,4;DOID:114,1.55e-19,2;DOID:2355,2.53e-11,1;DOID:178,1.10e-10,1;DOID:326,1.10e-10,1;DOID:3978,1.10e-10,1;DOID:3394,1.10e-10,1;DOID:5844,1.10e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!6.04e-44!115;UBERON:0002346!1.52e-21!90;UBERON:0003075!2.53e-20!86;UBERON:0007284!2.53e-20!86;UBERON:0001049!2.35e-19!57;UBERON:0005068!2.35e-19!57;UBERON:0006241!2.35e-19!57;UBERON:0007135!2.35e-19!57;UBERON:0005743!1.06e-18!86;UBERON:0001017!1.60e-18!82;UBERON:0002616!4.86e-17!59;UBERON:0000073!4.68e-16!94;UBERON:0001016!4.68e-16!94;UBERON:0000955!6.42e-16!69;UBERON:0006238!6.42e-16!69;UBERON:0000924!2.51e-15!173;UBERON:0006601!2.51e-15!173;UBERON:0000153!7.43e-15!129;UBERON:0007811!7.43e-15!129;UBERON:0004121!2.60e-14!169;UBERON:0003056!1.32e-13!61;UBERON:0003080!2.85e-13!42;UBERON:0000033!4.55e-13!123;UBERON:0002780!4.24e-12!41;UBERON:0001890!4.24e-12!41;UBERON:0006240!4.24e-12!41;UBERON:0001893!2.20e-10!34;UBERON:0000477!5.41e-10!286;UBERON:0002619!7.99e-10!22;UBERON:0002791!2.12e-09!33;UBERON:0001950!4.68e-09!20;UBERON:0003103!5.13e-09!69;UBERON:0001869!1.90e-08!32;UBERON:0000956!2.24e-08!25;UBERON:0000203!2.24e-08!25;UBERON:0000025!2.37e-08!194;UBERON:0002300!8.20e-08!3;UBERON:0002020!8.29e-08!34;UBERON:0003528!8.29e-08!34;UBERON:0004111!9.81e-08!241;UBERON:0001778!1.48e-07!3;UBERON:0001775!1.48e-07!3;UBERON:0000062!1.59e-07!511;UBERON:0003076!1.75e-07!15;UBERON:0003057!1.75e-07!15;UBERON:0000475!1.93e-07!365;UBERON:0002240!2.99e-07!3;UBERON:0000119!5.84e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0005629;1.53e-20;2!UBERON:0005358;1.53e-20;2!UBERON:0001886;1.53e-20;2!UBERON:0004086;1.53e-20;2!UBERON:0005282;1.53e-20;2!UBERON:0005281;1.53e-20;2!UBERON:0006876;2.81e-14;11!UBERON:0001778;1.12e-13;3!UBERON:0001775;1.12e-13;3!UBERON:0001301;1.05e-10;1!UBERON:0002171;1.05e-10;1!UBERON:0006518;1.05e-10;1!UBERON:0008949;1.05e-10;1!UBERON:0000101;1.05e-10;1!UBERON:0002167;1.05e-10;1!UBERON:0000488;1.73e-10;4!UBERON:0005284;9.00e-09;5!UBERON:0002203;2.82e-07;6!UBERON:0001768;2.82e-07;6!UBERON:0002200;2.82e-07;6!UBERON:0000020;7.90e-07;23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005629,1.69e-20,2;UBERON:0005358,1.69e-20,2;UBERON:0001886,1.69e-20,2;UBERON:0004086,1.69e-20,2;UBERON:0005282,1.69e-20,2;UBERON:0005281,1.69e-20,2;UBERON:0006876,2.41e-14,11;UBERON:0001778,7.92e-14,3;UBERON:0001775,7.92e-14,3;UBERON:0001301,7.46e-11,1;UBERON:0000488,1.33e-10,4;UBERON:0002171,1.46e-10,1;UBERON:0006518,1.46e-10,1;UBERON:0008949,1.46e-10,1;UBERON:0000101,1.46e-10,1;UBERON:0002167,1.46e-10,1;UBERON:0005284,9.36e-09,5;UBERON:0002203,2.37e-07,6;UBERON:0001768,2.37e-07,6;UBERON:0002200,2.37e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378139268656271,1.99556457716308,2.54720878510066,0.785874452986276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0.622422070799533,0,0,7.7192288098915,2.30470369792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0.448524337381443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.52442083432933,2.74514739048685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0.994147647766298,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0.969332746095218,0,0,0,0.0874599999961957,0.724999575434793,0,0,0,0.344743373241465,0,0,0,0,1.52581736317083,0,0.295547618953547,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0.30607276163049,0.695052375913368,0,0.103688191397247,0,0,0,0,0,0,0,0,0,1.57254001417827,0,0,0,0,0,0,0.451961481561065,0,0,0.316553979779393,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0.687481272035051,0,1.39775300349294,1.28767814440971,0.89268582976749,8.1963836433806,0,0,0,0,0,0,11.8542664892098,0.795229689809303,0,0,0,0,0,0,0.485996453264197,0,0.0788057072991982,1.52118305591495,0,0,0,0.714695326373367,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,1.72924735609633,1.24271716604159,0,0,0,0,0,0,0,0,0,0,0.366078794705889,0.250381861413,0,0.110929051536852,0.310482014706917,0.415045904808692,0,0,0,0,0.936669811613763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169732529954025,0,0.123935764259002,0,0,0,0,0,0,0.385375350578757,0,0,0.205116364240755,0,0.0691572524642179,0.484426936895553,0,0,0,0,0,0,0,0,0.526472298444801,0,0,0,0,0,0.202612753855184,0,0,0.317079050969534,0,0,0.496211178389294,0,0,0,0,0.606965604236632,1.36597314810779,0,0,0,0.203909198930495,0.394636641377094,0,0,0,0,0,0,0,0,2.64463213453628,0,0,0.173858272302579,0,0,0,0,0.860454717640555,0,0,0.846774100381858,0,0,0,0,0,0,0,0,1.1598144313382,0.485710993059139,0,0,0,0,0,0.603851374266694,0,0,0,0,0,0.785233868459781,0.297046400327086,2.113278637917,0,0.0939839179798536,0.644578879735772,0,0,0,0,0,0,0.286679166302903,0,0.339957450954573,0,0.5290268405154,0,0,0,0,0.109265571963696,0,0,0,0,0,0.909344378618873,0.535928260312357,0,0.20686599172379,0.426467963801962,1.42838658878244,0,0.124149428591716,0,0,0.606351566874658,0,1.02669990325584,0.0673520530145875,0.0717222053926763,0.99798106963804,0,0,0,0,0,0.122241444182866,0,0,0.402547587182052,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378139268656271,1.99556457716308,2.54720878510066,0.785874452986276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0.622422070799533,0,0,7.7192288098915,2.30470369792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0.448524337381443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.52442083432933,2.74514739048685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0.994147647766298,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0.969332746095218,0,0,0,0.0874599999961957,0.724999575434793,0,0,0,0.344743373241465,0,0,0,0,1.52581736317083,0,0.295547618953547,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0.30607276163049,0.695052375913368,0,0.103688191397247,0,0,0,0,0,0,0,0,0,1.57254001417827,0,0,0,0,0,0,0.451961481561065,0,0,0.316553979779393,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0.687481272035051,0,1.39775300349294,1.28767814440971,0.89268582976749,8.1963836433806,0,0,0,0,0,0,11.8542664892098,0.795229689809303,0,0,0,0,0,0,0.485996453264197,0,0.0788057072991982,1.52118305591495,0,0,0,0.714695326373367,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,1.72924735609633,1.24271716604159,0,0,0,0,0,0,0,0,0,0,0.366078794705889,0.250381861413,0,0.110929051536852,0.310482014706917,0.415045904808692,0,0,0,0,0.936669811613763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169732529954025,0,0.123935764259002,0,0,0,0,0,0,0.385375350578757,0,0,0.205116364240755,0,0.0691572524642179,0.484426936895553,0,0,0,0,0,0,0,0,0.526472298444801,0,0,0,0,0,0.202612753855184,0,0,0.317079050969534,0,0,0.496211178389294,0,0,0,0,0.606965604236632,1.36597314810779,0,0,0,0.203909198930495,0.394636641377094,0,0,0,0,0,0,0,0,2.64463213453628,0,0,0.173858272302579,0,0,0,0,0.860454717640555,0,0,0.846774100381858,0,0,0,0,0,0,0,0,1.1598144313382,0.485710993059139,0,0,0,0,0,0.603851374266694,0,0,0,0,0,0.785233868459781,0.297046400327086,2.113278637917,0,0.0939839179798536,0.644578879735772,0,0,0,0,0,0,0.286679166302903,0,0.339957450954573,0,0.5290268405154,0,0,0,0,0.109265571963696,0,0,0,0,0,0.909344378618873,0.535928260312357,0,0.20686599172379,0.426467963801962,1.42838658878244,0,0.124149428591716,0,0,0.606351566874658,0,1.02669990325584,0.0673520530145875,0.0717222053926763,0.99798106963804,0,0,0,0,0,0.122241444182866,0,0,0.402547587182052,0 | ||
|short_description=p@chr7:69432481..69432497,+ | |||
}} | }} |
Latest revision as of 11:18, 31 July 2015
Short description: | p@chr7:69432481..69432497, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:69432481..69432497, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system pericyte | 1.39e-20 | 2 |
fibroblast of choroid plexus | 1.69e-20 | 2 |
ciliated cell | 7.92e-14 | 3 |
ciliated epithelial cell | 7.92e-14 | 3 |
multi-ciliated epithelial cell | 7.92e-14 | 3 |
non-pigmented ciliary epithelial cell | 7.92e-14 | 3 |
pericyte cell | 9.07e-11 | 4 |
Ontology term | p-value | n |
---|---|---|
vascular plexus | 1.69e-20 | 2 |
ventricle of nervous system | 1.69e-20 | 2 |
choroid plexus | 1.69e-20 | 2 |
brain ventricle | 1.69e-20 | 2 |
ventricular system of brain | 1.69e-20 | 2 |
ventricular system of central nervous system | 1.69e-20 | 2 |
vasculature of organ | 2.41e-14 | 11 |
ciliary epithelium | 7.92e-14 | 3 |
ciliary body | 7.92e-14 | 3 |
epididymis | 7.46e-11 | 1 |
atypical epithelium | 1.33e-10 | 4 |
lower lobe of right lung | 1.46e-10 | 1 |
right lung lobe | 1.46e-10 | 1 |
lower lobe of lung | 1.46e-10 | 1 |
lobe of lung | 1.46e-10 | 1 |
right lung | 1.46e-10 | 1 |
brain vasculature | 9.36e-09 | 5 |
vasculature of eye | 2.37e-07 | 6 |
uvea | 2.37e-07 | 6 |
vasculature of head | 2.37e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
cardiovascular system disease | 5.74e-22 | 4 |
heart disease | 1.55e-19 | 2 |
anemia | 2.53e-11 | 1 |
vascular disease | 1.10e-10 | 1 |
ischemia | 1.10e-10 | 1 |
extrinsic cardiomyopathy | 1.10e-10 | 1 |
myocardial ischemia | 1.10e-10 | 1 |
myocardial infarction | 1.10e-10 | 1 |