FFCP PHASE1:Hg19::chr8:21646742..21646752,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2675 | |EntrezGene=2675 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4244 | |HGNC=4244 | ||
|TSSclassifier=strong | |||
|UniProt=E5RGR6 | |UniProt=E5RGR6 | ||
|association_with_transcript=12bp_to_ENST00000522071_5end | |||
|cluster_id=chr8:21646742..21646752,- | |||
|description=CAGE_peak_7_at_GFRA2_5end | |||
|id=chr8:21646742..21646752,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000333;2.71e-40;5!CL:0000047;4.90e-26;2!CL:0002321;2.94e-14;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000133,3.34e-08,59;CL:0000047,1.59e-07,8;CL:0000221,6.64e-07,72 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:171!3.44e-09!10 | |||
|ontology_enrichment_disease_v019=DOID:169;8.35e-34;6!DOID:171;8.54e-21;10!DOID:3095;4.53e-10;22!DOID:2994;4.53e-10;22 | |||
|ontology_enrichment_disease_v019_2=DOID:169,8.35e-34,6;DOID:171,8.54e-21,10;DOID:3095,4.53e-10,22;DOID:2994,4.53e-10,22 | |||
|ontology_enrichment_uberon=UBERON:0002346!1.15e-24!90;UBERON:0007023!1.73e-24!115;UBERON:0001950!1.04e-21!20;UBERON:0001893!1.78e-21!34;UBERON:0001049!6.41e-21!57;UBERON:0005068!6.41e-21!57;UBERON:0006241!6.41e-21!57;UBERON:0007135!6.41e-21!57;UBERON:0001869!3.44e-20!32;UBERON:0003075!3.62e-20!86;UBERON:0007284!3.62e-20!86;UBERON:0002616!4.79e-20!59;UBERON:0002619!1.39e-19!22;UBERON:0000073!1.63e-19!94;UBERON:0001016!1.63e-19!94;UBERON:0002791!1.75e-19!33;UBERON:0002020!5.10e-19!34;UBERON:0003528!5.10e-19!34;UBERON:0005743!2.43e-18!86;UBERON:0001017!1.02e-17!82;UBERON:0002780!2.99e-17!41;UBERON:0001890!2.99e-17!41;UBERON:0006240!2.99e-17!41;UBERON:0000956!5.19e-17!25;UBERON:0000203!5.19e-17!25;UBERON:0003080!9.27e-17!42;UBERON:0000955!3.92e-16!69;UBERON:0006238!3.92e-16!69;UBERON:0003056!2.27e-15!61;UBERON:0000200!2.84e-14!6;UBERON:0000924!1.40e-13!173;UBERON:0006601!1.40e-13!173;UBERON:0000153!2.17e-12!129;UBERON:0007811!2.17e-12!129;UBERON:0002771!3.86e-11!3;UBERON:0004121!7.09e-11!169;UBERON:0000033!7.00e-10!123;UBERON:0000064!2.74e-08!219;UBERON:0004177!4.76e-08!7;UBERON:0002021!2.80e-07!5;UBERON:0001871!4.87e-07!7;UBERON:0001872!5.14e-07!5;UBERON:0004733!6.23e-07!12;UBERON:0002028!6.23e-07!12;UBERON:0007277!6.23e-07!12;UBERON:0002298!6.97e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;2.71e-40;5!UBERON:0002410;2.71e-40;5!UBERON:0000010;5.74e-23;8!UBERON:0002021;3.42e-11;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,2.71e-40,5;UBERON:0002410,2.71e-40,5;UBERON:0000010,5.74e-23,8;UBERON:0002021,3.26e-11,5;UBERON:0001016,1.88e-09,89 | |||
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| ||
|short_description=p7@GFRA2 | |||
}} | }} |
Latest revision as of 09:15, 17 September 2015
Short description: | p7@GFRA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_GFRA2_5end |
Coexpression cluster: | NA |
Association with transcript: | 12bp_to_ENST00000522071_5end |
EntrezGene: | GFRA2 |
HGNC: | 4244 |
UniProt: | E5RGR6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectodermal cell | 3.34e-08 | 59 |
neuronal stem cell | 1.59e-07 | 8 |
ectodermal cell | 6.64e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 2.71e-40 | 5 |
autonomic nervous system | 2.71e-40 | 5 |
peripheral nervous system | 5.74e-23 | 8 |
occipital lobe | 3.26e-11 | 5 |
nervous system | 1.88e-09 | 89 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 8.35e-34 | 6 |
neuroectodermal tumor | 8.54e-21 | 10 |
germ cell and embryonal cancer | 4.53e-10 | 22 |
germ cell cancer | 4.53e-10 | 22 |