FFCP PHASE1:Hg19::chr8:224162..224167,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr8:224162..224167,- to FFCP PHASE1:Hg19::chr8:224162..224167,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr8:224162..224167,- | |||
|description=CAGE_peak_at_chr8:224162..224167,- | |||
|id=chr8:224162..224167,- | |||
|ontology_enrichment_celltype=CL:0000066!5.28e-16!254;CL:0000076!1.99e-08!62;CL:0000077!5.57e-07!19;CL:0002076!9.39e-07!43 | |||
|ontology_enrichment_celltype_v019=CL:0000077;6.94e-08;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.56e-17,253;CL:0000076,2.54e-10,63;CL:0000077,5.94e-08,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!9.86e-34!235;DOID:14566!1.28e-32!239;DOID:0050687!1.20e-26!143;DOID:305!9.45e-24!106;DOID:1749!9.63e-09!14;DOID:0050686!1.31e-08!137;DOID:193!8.72e-07!29 | |||
|ontology_enrichment_disease_v019=DOID:305;1.30e-08;106!DOID:1749;1.33e-08;14!DOID:0050687;3.29e-08;143!DOID:14566;7.00e-07;239!DOID:1036;8.02e-07;8!DOID:299;9.67e-07;25 | |||
|ontology_enrichment_disease_v019_2=DOID:162,4.39e-40,235;DOID:14566,1.13e-38,239;DOID:0050687,1.47e-31,143;DOID:305,7.79e-29,106;DOID:0050686,1.66e-12,137;DOID:1749,9.90e-09,14;DOID:1036,7.61e-07,8 | |||
|ontology_enrichment_uberon=UBERON:0001048!6.23e-07!168;UBERON:0000065!9.34e-07!53 | |||
|ontology_enrichment_uberon_v019=UBERON:0003343;4.26e-07;4!UBERON:0004785;4.26e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003343,3.02e-07,4;UBERON:0004785,3.02e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,1.39560233594486,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0.687720651731561,0.821005894499457,0.314843125254717,0,0,0,0.919421224478927,0.90361775633475,1.84877005083394,0.0774672005803016,1.13735385989937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0.661044872784862,0,0,0,0.764546456250458,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.383587685530591,0,0,0,0,0,0.0945348171640679,1.99556457716308,0.87834785693126,0.458426764241994,0.364295288292542,1.85392221392215,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0.417989933073621,0,0,0,0,0,0,0,0,0.625098097988558,3.36794058939255,2.36484109014977,0,0,0,0,0,0,0,0.12663051166458,0.397227542439656,0.573673241497627,1.06400514659507,0,0,0,0.311211035399766,0.134710672069688,0,0,0,0,0.312160076830321,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0.226864366320042,0.179389635688862,0,0,0,0,0.257640540045629,0,0.337552664482532,0,0,0,0,0.355009592516614,0,0,0,0.818238361772504,0.286804595389004,0.487894824518382,0.530119073285941,0.348581828608555,0.725627385107593,0.504641701751257,0.72995471815166,0,0,0,0,0,1.41968160047813,0.337169380156203,1.20505514941741,1.43382164552112,1.08939722046203,1.18635309555548,0.269662616320329,0,0.38474715694639,0,0,0.4115740113314,0,0,0,0,0,0,0.171567810298526,0.329250856225877,0,0.703702806881416,9.16625607069443,0,0,0,0.115930404975077,0.939269553886573,0.144366447761074,0,0.380508304469197,0,0,0,0,0,0.93733833986777,0.671928512795438,0.567100388969546,0,0,0,0,0,0.207328115540772,0.144119953416961,0.37872730027914,0,0,0,0,0,0,0,0,0,0.07333828582095,0.258543431515556,0,0,0,0,0,1.41849132023278,0.266422179016099,0,0,0.823240336780769,0.325736184293735,0,0,0.301439377059586,0,0.99972991182057,0,0,0,0,0,0,0,0,0.537182889719687,0,0,0,0,0.254094624222463,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0.308419387605311,0.355123450626254,0.246381468041427,0,0.232420756919918,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0.325378394664303,0.103041011647722,0,0,1.72279661398852,1.95018073810956,0,0.193341436584244,0,0.15350367472613,0.827019434907183,0,0,0,0.0890320356467374,0.165284915360978,0.576570202095319,14.8030746493718,0.50578890427775,0,0.31481234683064,0,0,0,0,0,0.143124886741991,0,0.316379424718726,0,0,0,0,0,0.179872457583315,0.274537029736055,0.353437207037059,0,0,0,0.48763373908959,0.487426979262569,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0.143411352204052,0,0,0,0,0,0,0.349934720244983,0.384888450902048,4.02181365321472,7.62236894029258,0,0,1.68471475667626,0,0.918893600827838,0,0,0,0,0,0,0,0,4.05931470284398,0,0.735120647943095,0,0.28853842595289,0.142283686696828,5.7393458182376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23087398947712,0.270455678475983,0.66614393599564,0,3.36852972734796,0.146508179271894,0.606802608747567,0,3.69376990848337,0,0,0,0,0.140669416410513,0,0,31.879936627327,1.59398390600856,0.276283915531148,8.06184793133683,0,2.58478091468246,0,12.9410425652151,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0.260427761085233,0.0874599999961957,0,13.3138334494035,0,0.709163045303809,0.344743373241465,2.91604613383254,0.694499979733169,0,0.241192877250816,0,0,0,0,3.15921544205071,1.11538995422883,0,0.113942055847001,0,2.60297168788339,1.08647371922008,0,0.0915975934018623,0.533034776018635,0,0,1.16348177330109,2.70714792740617,3.33306308340157,2.18168063068596,5.69261198172555,9.37725815984234,0,7.34547636716165,0.141353071433941,0,0,0.0884575645033392,0,0.296521128680622,0,0,0.134802265961354,0,0,0.182454789215666,0,0,0.789168805698781,0,0,1.0741718536843,1.9542044523884,0.518440956986236,0,1.323967823502,0,1.19472429772959,2.27687636823834,0,0.347119476670262,0.293977192243133,1.65412492502765,0,1.20390222730132,6.09564887121236,5.18934151311917,5.41962016551181,0,0,0.225980740780532,1.91858694505451,0.397429223405979,0,1.36885967914362,1.76349404553374,0.426905989478705,1.19885765749278,6.19588793762656,0.687219576995494,1.54435498075768,3.16920555573929,0,8.24929121158784,17.259834171349,12.4477387111677,0,4.91216002832582,0.600420288709789,0.136905378891993,0,4.72741985561953,0,0.279282401272254,1.14580212005842,0,1.19807400299395,1.71690419254628,0.669514372325618,0.873385142327441,0,0,0.551482276150566,0.329663433524666,0.674035438541849,2.26383207483922,0.423366660328922,0,0,0,0,0,0,0,0.121499113316049,0.335434687599266,0.315222829196793,0.0524545881349981,0,0.717149357331379,0.767660789277781,0.714695326373367,0.662091970365432,1.27134268827375,0,0,0,0,1.55975789423744,0,0.339936274560377,0.146552233678082,0,1.16354660725395,0.26446520348538,1.02652102730598,0,1.70859860108311,0.157204305099666,1.65695622138878,0,0,0.121792598380896,28.7253565996582,0,0.25068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| ||
|short_description=p@chr8:224162..224167,- | |||
}} | }} |
Latest revision as of 16:56, 31 July 2015
Short description: | p@chr8:224162..224167, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:224162..224167, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.56e-17 | 253 |
squamous epithelial cell | 2.54e-10 | 63 |
mesothelial cell | 5.94e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
mucosa of oral region | 3.02e-07 | 4 |
respiratory system mucosa | 3.02e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
cancer | 4.39e-40 | 235 |
disease of cellular proliferation | 1.13e-38 | 239 |
cell type cancer | 1.47e-31 | 143 |
carcinoma | 7.79e-29 | 106 |
organ system cancer | 1.66e-12 | 137 |
squamous cell carcinoma | 9.90e-09 | 14 |
chronic leukemia | 7.61e-07 | 8 |