FFCP PHASE1:Hg19::chr9:113342091..113342113,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr9:113342091..113342113,- to FFCP PHASE1:Hg19::chr9:113342091..113342113,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=79987 | |EntrezGene=79987 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15985 | |HGNC=15985 | ||
|TSSclassifier=strong | |||
|UniProt=B3KQM1,Q4LDE5 | |UniProt=B3KQM1,Q4LDE5 | ||
|association_with_transcript=46bp_to_ENST00000374461,ENST00000401783,NM_153366,uc004beu.2,uc010mtz.2,uc010mua.1_5end | |||
|cluster_id=chr9:113342091..113342113,- | |||
|coexpression_cluster_id=C2935 | |||
|description=CAGE_peak_5_at_SVEP1_5end | |||
|id=chr9:113342091..113342113,- | |||
|ontology_enrichment_celltype=CL:0000057!1.80e-14!75;CL:0000055!1.33e-10!180 | |||
|ontology_enrichment_celltype_v019=CL:0000136;1.70e-09;13!CL:0002615;1.76e-07;3!CL:0002504;3.27e-07;3!CL:1000279;3.27e-07;3!CL:1000280;3.27e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,4.60e-08,15;CL:0000057,8.21e-08,76;CL:0002615,1.75e-07,3;CL:0002504,2.88e-07,3;CL:1000279,2.88e-07,3;CL:1000280,2.88e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.42e-10!115;UBERON:0000475!9.93e-10!365;UBERON:0004457!7.05e-09!12;UBERON:0000042!7.05e-09!12;UBERON:0000062!3.49e-08!511;UBERON:0000468!4.13e-08!659;UBERON:0000481!8.08e-07!347;UBERON:0003102!9.71e-07!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;3.89e-11;9!UBERON:0000042;3.89e-11;9!UBERON:0003688;6.15e-09;6!UBERON:0002358;6.15e-09;6!UBERON:0003684;6.15e-09;6!UBERON:0001178;6.15e-09;6!UBERON:0004905;1.41e-08;8!UBERON:0000982;1.41e-08;8!UBERON:0004770;1.41e-08;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004457,3.50e-10,12;UBERON:0000042,3.50e-10,12;UBERON:0003688,6.25e-09,6;UBERON:0002358,6.25e-09,6;UBERON:0003684,6.25e-09,6;UBERON:0001178,6.25e-09,6;UBERON:0004905,2.09e-08,8;UBERON:0000982,2.09e-08,8;UBERON:0004770,2.09e-08,8 | |||
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| ||
|short_description=p5@SVEP1 | |||
}} | }} |
Latest revision as of 03:34, 20 September 2015
Short description: | p5@SVEP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SVEP1_5end |
Coexpression cluster: | C2935_placenta_Mesenchymal_tridermal_sacrococcigeal_Synoviocyte_Smooth_Fibroblast |
Association with transcript: | 46bp_to_ENST00000374461, ENST00000401783, NM_153366, uc004beu.2, uc010mtz.2, uc010mua.1_5end |
EntrezGene: | SVEP1 |
HGNC: | 15985 |
UniProt: | B3KQM1Q4LDE5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 4.60e-08 | 15 |
fibroblast | 8.21e-08 | 76 |
adipocyte of omentum tissue | 1.75e-07 | 3 |
enteric smooth muscle cell | 2.88e-07 | 3 |
smooth muscle cell of large intestine | 2.88e-07 | 3 |
smooth muscle cell of colon | 2.88e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
cavity lining | 3.50e-10 | 12 |
serous membrane | 3.50e-10 | 12 |
omentum | 6.25e-09 | 6 |
peritoneum | 6.25e-09 | 6 |
abdominal cavity | 6.25e-09 | 6 |
visceral peritoneum | 6.25e-09 | 6 |
articulation | 2.09e-08 | 8 |
skeletal joint | 2.09e-08 | 8 |
articular system | 2.09e-08 | 8 |